Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1080 ATGAGCAACCTTGCTCTGATACCAATTGTTGGACCGGAGATTCCACCGCCGTCGTTCCCCGCCGCCACCATCTCAACTGTGCTCCTGCTCCAACCCTCCAAGGTTCCACTCCTGCAATTCCACGGACGATTCTTCTTTCCTTTTCCCTCTGCCTTTGCTCCCCCTCTTGGGGATGTCGATCAAGAGACCACTCTACGACCGCCTCAACCATCCTCTCCTCCGCCGCCGCTAGTTTCAGAAATTATAATGTCCTCGAGAGATTCTAACGTCCTTTTCAGTGGTGGCGGTATCAGTTTTCTCAATGAAAATCACACTGGAAAGTTCAGCTATGGATATTCTAGTTTCAAGGGCAAAAGGGCTTCGATGGAGGACTTCTATGAAACAAGAATTTCTGAAGTTGATGGGCAGATGGTTGCTTTTTTCGGTGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCATCCAGACTTTATCAAAGACACAAGGACTGCTATTATTGAGGTCTTTAAGCAGACCGATGCCGATTATATCAATGAAGAGAAAGGACAGCAGAAAGATGCTGGGTCAACTGCATCAACTGCTGTATTGTTGGGGGATCGTCTCCTTGTTGCAAATGTTGGGGATTCTAGAGTAGTTGCATCGAGGGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAACCTGATAGATCAGACGAGCGCGAAAGGATTGAACAAGCTGGAGGGTTCATTCTTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCGCGTGCCTTTGGAGATAAGCTACTCAAACCATTTGTTGTCGCTGATCCCGAAATTAAGGAAGAAGAACTTGAAGGTGTAGATTTTATTATTATTGCAAGCGATGGACTTTGGAATGTCATCTCAAACGAGGAAGCTGTAGCATTGGTACAACACAACCAAGATGCAGAAATGGCATCAAGAAACCTAATCCAAGAAGCTTTTGCTCGAGGGAGTTCCGACAACATTACATGCGTCATTGACGTTCCTGCCCAATCTGTAGATTACTTAATACTTTGCCTTTATGATTATGGCATGCTGATATGTTCCAACTTTTGCTTCAAACTCATGTTGCACATGTCGTTTCAATGGGTGGTTAGCACTCTGGACTTTGAATCCAGCGACCTGGGTTCGACTCCCGGTAGGACCTTAATAATTTTCCATTTTCGCTTTTTGAAAACGGTCTCCACGAAAATGGTGAACGATACTGAGTATTACGACATTCTCGGTGTTCGTTCTTCTGCTTCTGAGGAGGAGATTCGTAAGGCCTATTATCTTAAGGCAAAACAAGTCCATCCGGATAAGAATTTGAATGATCCTCAAGCTGCTGAAAGGTTTCAGGCGTTAGGTGAAGCTTATCAAGTGTTGAGTGATGCAGTCCAAAGAGATGCATATGATAGGAATGGGAAACATAGTATTACTAGGGAATCCATGCTTGACCCTACTGCTGTTTTTGCACTTCTATTTGGGAGTGAATTATTTGAGGACTACATTGGACATTTAGCTGTAGCATCAATGGCCTCATCTGAATTAGAGAACGAAATTGGCAATCCAGAGAGATTACATGATAAGTTGAAGGCAATCCAGAAAGAAAGAGAAGAAAAACTTGCACGTGTACTCGAGGGTTTTCTTAATCAATATGTTCTAGGTGACAAAGACGGATTCTTACGACATGCTGAATCTGAAGCCAAAAGACTTTCTAATGCGGCTTTTGGCGTTAATATATTACACACTATAGGCTACATTTATTCAAGACAAGCAGCACAAGAGCTTGGAAAGAGAGCCATTTATCTTGGCGTGCCATTTGTGGCTGAATGGTTTCGCAACAAGGGACATTTTTGGAAGTCACAGATAACAGCTGCAAAAGGTGCTTTTCAGTTGTTACAACTTCAAGATGATATTTGCCGGCAGTTTAAAATGGATGGTAGTGGTCCTGGAAATGATATTGAATCGCATATTCAAGCGAATAAAGACACATTCCTCAATTCTTTGTGGAAGCTTAATGTGGTTGACATAGAACTGACACTTATAAATGTGTGCCAGATGGTGCTACGCGATAATACTGTTAGAAAGGAAGAACTAAAAGCTCGTGCCCTGGCTCTGAAGATTCTTGGAAAGATATTCCAGGAGAAGCAGGCACAAAATGGTGGAACGTCAAGAAAGAAAGGTGCTGCTGCAATAGATGACGACGGAACGAGTTCAGAGAGCAGCGATGATGAGGACGATCCCCGAAGGCCGCTATCATATCGAACTCCTTTTCTTACTCAGGGTATAGGTAGACTCTTCAGATGCCTCTGTAACCCAGCATTTGATGTGGACGATGATGAAATTGTGTATAAAAGCAAATGA 2421 43.41 MSNLALIPIVGPEIPPPSFPAATISTVLLLQPSKVPLLQFHGRFFFPFPSAFAPPLGDVDQETTLRPPQPSSPPPPLVSEIIMSSRDSNVLFSGGGISFLNENHTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTRTAIIEVFKQTDADYINEEKGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERERIEQAGGFILWAGTWRVGGILAVSRAFGDKLLKPFVVADPEIKEEELEGVDFIIIASDGLWNVISNEEAVALVQHNQDAEMASRNLIQEAFARGSSDNITCVIDVPAQSVDYLILCLYDYGMLICSNFCFKLMLHMSFQWVVSTLDFESSDLGSTPGRTLIIFHFRFLKTVSTKMVNDTEYYDILGVRSSASEEEIRKAYYLKAKQVHPDKNLNDPQAAERFQALGEAYQVLSDAVQRDAYDRNGKHSITRESMLDPTAVFALLFGSELFEDYIGHLAVASMASSELENEIGNPERLHDKLKAIQKEREEKLARVLEGFLNQYVLGDKDGFLRHAESEAKRLSNAAFGVNILHTIGYIYSRQAAQELGKRAIYLGVPFVAEWFRNKGHFWKSQITAAKGAFQLLQLQDDICRQFKMDGSGPGNDIESHIQANKDTFLNSLWKLNVVDIELTLINVCQMVLRDNTVRKEELKARALALKILGKIFQEKQAQNGGTSRKKGAAAIDDDGTSSESSDDEDDPRRPLSYRTPFLTQGIGRLFRCLCNPAFDVDDDEIVYKSK 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17139833 17155135 - CaPI482276_08g010800.1 Cam08g1080 133131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1080 806 CDD DnaJ 428 482 IPR001623 -
Cam08g1080 806 SMART dnaj_3 427 485 IPR001623 -
Cam08g1080 806 ProSitePatterns PPM-type phosphatase domain signature. 140 148 IPR000222 GO:0043169(InterPro)
Cam08g1080 806 Gene3D - 100 355 IPR036457 -
Cam08g1080 806 PRINTS DnaJ domain signature 485 504 IPR001623 -
Cam08g1080 806 PRINTS DnaJ domain signature 448 463 IPR001623 -
Cam08g1080 806 PRINTS DnaJ domain signature 430 448 IPR001623 -
Cam08g1080 806 PRINTS DnaJ domain signature 465 485 IPR001623 -
Cam08g1080 806 Pfam X-domain of DnaJ-containing 553 740 IPR026894 -
Cam08g1080 806 ProSitePatterns Nt-dnaJ domain signature. 470 489 IPR018253 -
Cam08g1080 806 ProSiteProfiles dnaJ domain profile. 428 493 IPR001623 -
Cam08g1080 806 ProSiteProfiles PPM-type phosphatase domain profile. 109 354 IPR001932 -
Cam08g1080 806 Pfam DnaJ domain 428 490 IPR001623 -
Cam08g1080 806 SUPERFAMILY PP2C-like 106 351 IPR036457 -
Cam08g1080 806 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 307 766 IPR052423 -
Cam08g1080 806 MobiDBLite consensus disorder prediction 739 774 - -
Cam08g1080 806 SMART PP2C_4 99 352 IPR001932 -
Cam08g1080 806 CDD PP2Cc 108 351 IPR001932 -
Cam08g1080 806 SUPERFAMILY Chaperone J-domain 422 523 IPR036869 -
Cam08g1080 806 Pfam Protein phosphatase 2C 110 347 IPR001932 -
Cam08g1080 806 Gene3D DnaJ domain 417 507 IPR036869 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1072 Cam-Chr5:9793050 Cam08g1080 Cam-Chr8:17139833 5.20E-28 dispersed
Cam05g1766 Cam-Chr5:26427285 Cam08g1080 Cam-Chr8:17139833 5.50E-95 dispersed
Cam08g1080 Cam-Chr8:17139833 Cam11g0439 Cam-Chr11:5813215 1.60E-92 dispersed
Cam08g1080 Cam-Chr8:17139833 Cam05g1043 Cam-Chr5:9434930 2.00E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1080 - - - 0.0