Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1105 ATGGCGGTGAATTTTACCTCCAATGTGTATGCTAAACCCAACGGCCAAACAGAGGAAGCTCAGTGGCGGCCGGCGGGCAGTTGTCCATCTCCACTCACTTCTTTCTATTCATCAAACCTCTCCGCAGGCTTCGAACTCCAAACCCAATTCCTCTTCTTCCATTTTAGAATGTTGATGAACTCATCTTCTTCTCCGATCATCTTCTTCTTCTTGATTCTCTCCCACTTCCCCCTTCTTTCTCTTTCTTTCTCTCCGAATCAAAACATTACCCTCTCCGGCGATGCCCATCTCAGAAACAACGCCATTTTCCTCACTCAAGAACTCAATTGCCTTCCCTTTTCTTCTAATTCCTCTTCCTCTTCTGGCTTCGGCACCGCCTTCTACATAAACCCTATTCGCTTTCTTGATTCCTCCACCAACTCCACCGCTTCTTTCTCCTCTCGCTTCTCCCTCTCCATCCTCCCCACCCCACTTTGCCCTTTCGCCGACGGAATCGCTTTCCTCATCACCTCCGATTCCAAATCTTTCAGCCGTTCTTATGGCTATATGGGCCTCCCCGACCCCCCTCTTAACTCCCATTACTCGTTCGTCGCTGTCGAATTCGACACCAATTTCGACCCTAATCTCGGTGACATTAACGACAACCATCTCGGCCTCGATGTCAATTCAGCTACCTCTTTGACCTCTGTGGATTTTGGGTCCAGAGGCATTGTTCTCAAAAATGGCAGACAGATTACTGCTTGGATTGAGTACAGAGATGACTCGAAAACGATCCAGGTTTGGGTTGGTTATTCTCAAACAAGGCCTGTAAATCCTCTTCTAGTTGCGCAGGTTGACCTTTCTAAGCAATTTAAAGAGTTTATGTATGTGGGATTCTCTGCTTCTAATGGACAGGGCTCTGCTCTTTACATTGTTGATAGATGGAGATTCAGAACTTTTGGGTTGATTCCTTCATTGAGTCCTGTTGATACTATTAATGAAGGAAATTGTTTTATGTGTTCGTCAGAGGATTCGAATTCTAGTAGTAGTCGTTTTGTTGATGCTCGTAAAAGGAGGAAGAAGATTGGAGAGATGACTCTTGGATTGGGAGGTTTGGCTGCATTTGTCTGTTCTATTACTGCAATTTTTGGGTTGGTTAGCTTTGTTTTGATAAAGAAGTTGAGAGGAAGAATGTGTAGAGGCAGAGCAATCCACAGAACTTGTCAAGTTGAGATGAACAGAGTTCCAACAAGATTGTCTCTTGGGGAGATAAAGTTAGCTACAATGGGTTTTAATCAAAATAGAGTTGTTGGGGAAGGTGGTTCTGCAACTGTTTACAAAGGGTCTCTTGCATCAGGTGGAGAAGTGGCTGTTAAACGTTTCGAGCGAGGCACGGCGAACAACCGTCTATGCAATCCTTTCACGACAGAGTTTGCAACGATGGCGGGATGCTTACGACACAAGAATTTGGTTCAGCTGCATGGATGGTGTTGTGAAGCAAATGAATTGGTGCTTGTTTATGAGTATTTAGCCAATGGAAGCCTTGCCAAACTTCTTCACAACACATCCCCCAATTCACAATTTGTTCTTCCTTGGAAGAAGAGGTTTTCCGTAGTTCTTGGGGTTGCTTCTGCATTGACATATCTCCATGAAGAGTGTGAAAGCCAAATTATCCATAGAGATGTCAAGACTTGCAACATTATGCTTGATGCAGACTTCAATGCGAAACTCGGGGATTTCGGTCTAGCAGAAGTGTATGAACACAGTTCGATCACAAGGGAAGCAACCATACCGGCTGGAACAATGGGCTATCTTGCACCTGAATACGTTTATTCCGGTGTTCCCACCGTGAAAACTGATGTTTACAGCTTCGGTGTGGTGATGCTTGAAGTTGCGTCAGGAAGGAGGCCTGTAAATGAAGACGGGACAGTGCTTGTCGATTGGATTTGGGATTTATGGGAAGTGGGGAAACTGATTGAAGCATCTGATTCAAGGTTGATGGGAAACTACAATATAGTAGAAATGGAGAGAATGCTAATGGTAGGACTTTTTTGTGTACATCCAAATCATGAAAAGAGACCAACTGTGAAAGAAGCTGCAAGAATTCTTAAAGGGGAAGCACCACTCCCAGTACTGCCATCAAGGAAACCAAGGGTCAACATTAGGCCTGTTTTTCCTGATGATTCTGAAGACATAGAGAATCCTTGTGCCGATTATCTCGCCTTTGACGAATCAGCATGGATGACCCCCAAGAGTCAGTTTAGTTAG 2247 44.64 MAVNFTSNVYAKPNGQTEEAQWRPAGSCPSPLTSFYSSNLSAGFELQTQFLFFHFRMLMNSSSSPIIFFFLILSHFPLLSLSFSPNQNITLSGDAHLRNNAIFLTQELNCLPFSSNSSSSSGFGTAFYINPIRFLDSSTNSTASFSSRFSLSILPTPLCPFADGIAFLITSDSKSFSRSYGYMGLPDPPLNSHYSFVAVEFDTNFDPNLGDINDNHLGLDVNSATSLTSVDFGSRGIVLKNGRQITAWIEYRDDSKTIQVWVGYSQTRPVNPLLVAQVDLSKQFKEFMYVGFSASNGQGSALYIVDRWRFRTFGLIPSLSPVDTINEGNCFMCSSEDSNSSSSRFVDARKRRKKIGEMTLGLGGLAAFVCSITAIFGLVSFVLIKKLRGRMCRGRAIHRTCQVEMNRVPTRLSLGEIKLATMGFNQNRVVGEGGSATVYKGSLASGGEVAVKRFERGTANNRLCNPFTTEFATMAGCLRHKNLVQLHGWCCEANELVLVYEYLANGSLAKLLHNTSPNSQFVLPWKKRFSVVLGVASALTYLHEECESQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSITREATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVMLEVASGRRPVNEDGTVLVDWIWDLWEVGKLIEASDSRLMGNYNIVEMERMLMVGLFCVHPNHEKRPTVKEAARILKGEAPLPVLPSRKPRVNIRPVFPDDSEDIENPCADYLAFDESAWMTPKSQFS 748
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17425639 17429070 - CaPI482276_08g011050.1 Cam08g1105 133156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1105 748 CDD lectin_legume_LecRK_Arcelin_ConA 82 314 IPR001220 GO:0030246(InterPro)
Cam08g1105 748 Pfam Protein kinase domain 425 692 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1105 748 FunFam L-type lectin-domain containing receptor kinase S.6 392 502 - -
Cam08g1105 748 ProSitePatterns Protein kinases ATP-binding region signature. 430 452 IPR017441 GO:0005524(InterPro)
Cam08g1105 748 SUPERFAMILY Concanavalin A-like lectins/glucanases 79 314 IPR013320 -
Cam08g1105 748 CDD STKc_IRAK 430 698 - -
Cam08g1105 748 ProSiteProfiles Protein kinase domain profile. 424 705 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1105 748 Pfam Legume lectin domain 82 312 IPR001220 GO:0030246(InterPro)
Cam08g1105 748 SMART serkin_6 424 695 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1105 748 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam08g1105 748 Gene3D Phosphorylase Kinase; domain 1 389 502 - -
Cam08g1105 748 SUPERFAMILY Protein kinase-like (PK-like) 404 696 IPR011009 -
Cam08g1105 748 PANTHER - 91 706 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cam08g1105 748 ProSitePatterns Legume lectins beta-chain signature. 197 203 IPR019825 -
Cam08g1105 748 FunFam L-type lectin-domain containing receptor kinase VIII.1 503 714 - -
Cam08g1105 748 Gene3D - 78 316 - -
Cam08g1105 748 Gene3D Transferase(Phosphotransferase) domain 1 503 701 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0724 Cam-Chr3:8140020 Cam08g1105 Cam-Chr8:17425639 1.80E-31 dispersed
Cam03g0725 Cam-Chr3:8140849 Cam08g1105 Cam-Chr8:17425639 2.40E-26 dispersed
Cam08g1105 Cam-Chr8:17425639 Cam10g0417 Cam-Chr10:6522283 1.30E-128 dispersed
Cam08g1105 Cam-Chr8:17425639 Cam10g2007 Cam-Chr10:33952059 4.50E-118 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85366 PF00069 Pkinase 7.40E-43 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1105 - - - 0.0