Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1132 ATGATGGATTTGAACTTTACCTCCCGGAAGCCACCGCAGACGGCGCCGAGGATGGACATCGAACAGATGCCGGAGGCTCCACACCGTGGGTATCACCACCGCCGTTCCCACTCCGATACCTCCTTCCGCTTCGCTAATTTTGACGATCTCCTCCTCTTCGACCCTCCCGACATCGATTTATCATCTGCTCTTCCTTCTCCCTCGCCGTCACCGTCTCCGACGCCGTCAGGGGCTCGTATGGCCGTCGATTCCTTCAACTCGAGGTCCCCTGAAGACGTCTCTGCCACAAAACCTAGGGCTGGAAACGGTAACTCCGCTTCCTTCTTCAGTTCTCACTACCGGAGCTTGTCGATGGATTCCGACTTCTTTGAGGGATTGGGGATGGCCGGAGATGGGAGTGACGGTGAAGTACTTGGCGGGAGAGTGACGGCGGGGGAGAAGAAGATGAGTCGCCATAGGCATAGCAATTCCATGGATGGGTCTTTGACCTCCTCGTTTGAAGCTGATTCCACCAAGAAAGCCATGGCACCTGATAAACTCGCTGAGCTTGCTTTGATGGACCCTAAAAGAGCTAAGAGGATTCTGGCAAATAGACAATCAGCTGCACGATCCAAGGAGAGGAAAATACGTTACACTAATGAACTAGAGAAGAAGGTGCAGATGCTTCAGTCAGAAGCCACTTCCCTTTCTGCTCAGGTCACAGTGTTACAGAGAGATACCACTGGATTGACTACTGAGAACAGAGAACTCAAGCTAAGGTTGCAAGCCATGGAGCAGCAAGCCCATCTGAGGGATGCTTTGAATGAGACACTGAAGGAGGAAGTGCAGCGGCTTAAGATAGTTGCGGCCCAACTGCCTGTTGCAAATGGCAACTCATTCAACATTGGAGGAGGGCTACCTCCTCAATTCCCTCCTCTCCAAACATCATCATTGCTTCAATTTGGCAACTCCCAGAATCATCATCAACAGCCACAACTGCTTCACATGTCTCAGCCTGATGCTCGGGGAGGGTCTCCCCTGTCCCAGCCTCCCGGAGTTTAA 1041 52.45 MMDLNFTSRKPPQTAPRMDIEQMPEAPHRGYHHRRSHSDTSFRFANFDDLLLFDPPDIDLSSALPSPSPSPSPTPSGARMAVDSFNSRSPEDVSATKPRAGNGNSASFFSSHYRSLSMDSDFFEGLGMAGDGSDGEVLGGRVTAGEKKMSRHRHSNSMDGSLTSSFEADSTKKAMAPDKLAELALMDPKRAKRILANRQSAARSKERKIRYTNELEKKVQMLQSEATSLSAQVTVLQRDTTGLTTENRELKLRLQAMEQQAHLRDALNETLKEEVQRLKIVAAQLPVANGNSFNIGGGLPPQFPPLQTSSLLQFGNSQNHHQQPQLLHMSQPDARGGSPLSQPPGV 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17661171 17662819 - CaPI482276_08g011320.1 Cam08g1132 133183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1132 346 Pfam bZIP transcription factor 189 245 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1132 346 MobiDBLite consensus disorder prediction 156 170 - -
Cam08g1132 346 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 19 329 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam08g1132 346 CDD bZIP_plant_RF2 190 239 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1132 346 MobiDBLite consensus disorder prediction 145 171 - -
Cam08g1132 346 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 250 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1132 346 MobiDBLite consensus disorder prediction 1 37 - -
Cam08g1132 346 MobiDBLite consensus disorder prediction 315 329 - -
Cam08g1132 346 SMART brlzneu 185 249 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1132 346 Gene3D - 188 241 - -
Cam08g1132 346 SUPERFAMILY Leucine zipper domain 189 241 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1132 346 MobiDBLite consensus disorder prediction 315 346 - -
Cam08g1132 346 MobiDBLite consensus disorder prediction 75 105 - -
Cam08g1132 346 FunFam Transcription factor VIP1 188 241 - -
Cam08g1132 346 Coils Coil 212 232 - -
Cam08g1132 346 Coils Coil 240 260 - -
Cam08g1132 346 MobiDBLite consensus disorder prediction 61 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0480 Cam-Chr2:5461850 Cam08g1132 Cam-Chr8:17661171 5.70E-41 dispersed
Cam06g1178 Cam-Chr6:22762161 Cam08g1132 Cam-Chr8:17661171 1.90E-10 dispersed
Cam07g0518 Cam-Chr7:7480326 Cam08g1132 Cam-Chr8:17661171 1.10E-50 dispersed
Cam08g1132 Cam-Chr8:17661171 Cam09g0955 Cam-Chr9:9848485 4.50E-89 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52398 PF00170 bZIP_1 2.50E-07 CL0018 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1132 K20557 - csv:101215277 494.582