Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1134 ATGGATCCCAACAAATTAAACCTAAGTACTTTGGAGCAACAATCCAATTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCTGCTGTGCTTGGTGCCAACGATGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACTGGTTTTGCCGGGCTAGTCGCGGGGGCGTGTAGTATGGCGATTGGGGAGTTTGTGTCTGTTTACTCTCAATTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGAAGTAGTAATATAGAAGGAGTAGTACAAGGGCAAGAGAGCAAAGATGAAGAAAAATTACCAAATCCACTTCAAGCAGCTGCAGCCTCTGCCTTAGCTTTCTCTCTAGGAGCAATGGTGCCATTATTGGCAGCTTCCTTTATAAGAGAATATAAAGTAAGGCTGGCGGTGGTTGTGGCAGCGGTGACGTTAGCTCTCGTCGTGTTCGGGTGGTTGGGCGCGGTCCTTGGAAAGGCATCACCGATCAAATCGGCCGCTAGAGTGTTGGTCGGAGGTTGGTTAGCTATGGCTATAACGTTTGGCTTGACAAAGCTAATCGGAGCAAGCGGACTCTAG 648 47.53 MDPNKLNLSTLEQQSNLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSSNIEGVVQGQESKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVAAVTLALVVFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 17679820 17680467 + CaPI482276_08g011340.1 Cam08g1134 133185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1134 215 Pfam VIT family 33 110 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cam08g1134 215 Pfam VIT family 120 207 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cam08g1134 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 211 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1134 Cam-Chr8:17679820 Cam09g0954 Cam-Chr9:9826020 6.20E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1134 K22736 - csv:101204048 370.933