Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1228 ATGGAGGTTTCCGGCAGCGGCGGCGGCGGAGGAAGTTCATCAAGCGAGAAACGGCGTCGTTCGCTCAGAGAAATCACGACCTCCTTCTTCATCGACGTACTAACCGGACCTTGGTTCATGGTGTTCGCTTCATTCCTCGTCATGTCCACCGCCGGAACGCCGTACATGTTCGGACTTTACTCCGGCGCCATAAAATCCGTCCTCGGCTACGATCAGAGCACTCTGAATCTAATCAGTTTTTTCAAAGACCTAGGAACGAACGTCGGCGTAATTTCCGGCCTAATCGCCGAAATTACGCCGCCGTGGGTGGTTCTAGCGATCGGCGCGGCGATGAACTTCGTCGGATACTTCATGATTTGGTTATCGGTGACGGAAAAAGTGGCGGCGCCGTCGGTGTGGCTGATGTGTCTTTACATTTGCTTAGGGGCAAATTCGACGGCGTTTGCGAACACCGGGGCTTTAGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTAGGGATTTTGAAAGGATATGTTGGATTAAGCGGAGCAATTTTGACGCAATTCTATCATGCGATTTATGGTGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTTATTTCTGTGGTGTTCTTGAGGACGATTCGGGTTATGAAGGTTCAACATCAGCCTAATGAACTCACAGTTTTCTACAGGTTCTTGTACATTTCTCTTGGCCTAGCCGGATTTCTCATGGTGATGATCGTTCTTCAGCAGAAATTCAAATTCTCCCACATCGAATACAGTTCCAGCGCCGCCGTCGTCGTCTTTCTCCTCTTCTTTCCGATCTTCATCGTCATCGCCGAAGATTACAAATTCTGGCGCAAAAAGCTATCTCAACTCCAAAATCCTTCTCCACTCACCATCATCGCTCAAAAACCGCCGCCGTCACAACAGTTCCCAATCAACCTCGAAACCTCCAACACATCTCCCGCCGGACAACCAAAGCCACAAACGCTATCCTGCTGGAGAACCGCCCTAAATCCGCCGCCAAGAGGCGAAGATTACACGATTCTACAAGCGCTCTTTAGCGCCGACATGCTCCTCCTATTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGCTTCTCTACGGTATCCTAAACAGAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCAGAAATTTTCCTCACCAAATACAAATTCCCACGAACCCTAATTCTAACCCTAATTCTCCTCCTCTCTTGCGTCGGCCACCTCCTAATCGCCTTCAATCCTCCCGGCGGCCTCTACTTCGCTTCAATCGTCATCGGATTCTGCTACGGCGCTCAATGGCCGATTCTATTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACACTTTACAATTTCGGATCCGCCGCGAGTCCGATCGGGTTGTATTTCGTCAATGTTCGAGTCGCCGGACATTTGTACGACAAGGAGGCCAACCGGCAAATGGCGGCGGCCGGGAGGACGAGGATAGCCGGAGAAGAGTTGAACTGCGTTGGCGTTAATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACTTTGATTGGAGCTCTGTTTTCATTCATTTTGGTTCTTAGAACCAAAGGTTTTTATAAGACTGATATTTATAGGAGGTTTAGGGATGAGGTTGAAGAAGAAGCAGCTGCTGGAAACGACGTCGTTTCAGATGATGATAGAAATGTAGAAGGCAACAAGTAA 1821 49.15 MEVSGSGGGGGSSSSEKRRRSLREITTSFFIDVLTGPWFMVFASFLVMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGVISGLIAEITPPWVVLAIGAAMNFVGYFMIWLSVTEKVAAPSVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAILTQFYHAIYGDDSKSLILLIAWLPAVISVVFLRTIRVMKVQHQPNELTVFYRFLYISLGLAGFLMVMIVLQQKFKFSHIEYSSSAAVVVFLLFFPIFIVIAEDYKFWRKKLSQLQNPSPLTIIAQKPPPSQQFPINLETSNTSPAGQPKPQTLSCWRTALNPPPRGEDYTILQALFSADMLLLFLSTACGVGGTLTAIDNLGQIGASLRYPKQSISTFVSLVSIWNYLGRVVSGFTSEIFLTKYKFPRTLILTLILLLSCVGHLLIAFNPPGGLYFASIVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSAASPIGLYFVNVRVAGHLYDKEANRQMAAAGRTRIAGEELNCVGVNCFKMSFIIITGVTLIGALFSFILVLRTKGFYKTDIYRRFRDEVEEEAAAGNDVVSDDDRNVEGNK 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18654438 18658093 + CaPI482276_08g012280.1 Cam08g1228 133279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1228 606 Gene3D MFS general substrate transporter like domains 357 573 IPR036259 -
Cam08g1228 606 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 37 581 - GO:0016020(PANTHER)
Cam08g1228 606 Pfam Nodulin-like 37 282 IPR010658 -
Cam08g1228 606 SUPERFAMILY MFS general substrate transporter 235 571 IPR036259 -
Cam08g1228 606 SUPERFAMILY MFS general substrate transporter 40 284 IPR036259 -
Cam08g1228 606 CDD MFS_Mch1p_like 36 558 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0266 Cam-Chr3:3726154 Cam08g1228 Cam-Chr8:18654438 1.30E-181 dispersed
Cam04g0964 Cam-Chr4:23683751 Cam08g1228 Cam-Chr8:18654438 4.70E-165 dispersed
Cam05g2330 Cam-Chr5:31353766 Cam08g1228 Cam-Chr8:18654438 1.60E-160 dispersed
Cam05g2331 Cam-Chr5:31363743 Cam08g1228 Cam-Chr8:18654438 2.30E-218 dispersed
Cam06g1797 Cam-Chr6:29080974 Cam08g1228 Cam-Chr8:18654438 3.60E-82 dispersed
Cam06g1798 Cam-Chr6:29086094 Cam08g1228 Cam-Chr8:18654438 3.00E-77 dispersed
Cam08g1228 Cam-Chr8:18654438 Cam11g0738 Cam-Chr11:9204577 6.00E-81 dispersed
Cam04g0248 Cam-Chr4:8369320 Cam08g1228 Cam-Chr8:18654438 6.20E-144 transposed
Cam10g1964 Cam-Chr10:33579453 Cam08g1228 Cam-Chr8:18654438 3.60E-130 wgd
Cam05g2329 Cam-Chr5:31342122 Cam08g1228 Cam-Chr8:18654438 3.70E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1228 - - - 0.0