Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1249 ATGGCAACGCCGAAGCCTCGCACCACTCGGTCCAGGTCTCACAGGGATATTCCGGATTTGGAGAAGATGGACGCTGCTTACAGTTGGGACGCCCTTGAATGGACCAAGATTGAGCCTGTTCCGCGGTCGGTTTCGCGTGTCAACTTGGATTGCTTGCTTGAAGCGGAACAAGTGATTGCTGAGGGCTATGGTGTTGTTCTTGTGAATACTGATGAGGCGGGTACCTTGTTTGTAACCAATTTTCGTCTTCTATTTCTAAGTGAAGGAACCATGGACGTTATTGCCCTTGGGACTATACCACTGGCTACAATTGATAAATTCAACAAAATAGTTGTGAAGACAAATGCTGTCTCTCGCCAATCCGAAAAGTCTTCACCATCTAGGCGACTTCTTCAGGTCATTGGAAAAGACATGAGAATTATCGTCTTTGGTTTTCGTCCAAGAACAAAACAGAGGCGCAAAGTATATGATGCATTATTGAGGTGTATGAAGCCTGCAAGAATATGGGATCTATATGCATTCCAATCCGGGCCATCCAAGTACTGTAATACAGACCCAAAAGTTCGTTTGCTAAATGAGTATTTTCGGCTTCTTGGAAAGGGTTCCCTACATGCATCTATGAGTATGATTGAAGATGGATCATTTACATTGTCCAATGAATTGTGGAGAATAACTAAAATCAATTCCAATTATACTCTGTGTCAGAGTTATCCATTTGCATTGGTCGTTCCTAAACACATTAGTGATGAAGAGATGTTGCAGGCTTCTACCTTTCGTGCTAGATGCCGTTTGCCTGTTGTTTCGTGGTGCAATCCTGGCACTGGAGCTGTTCTTGCACGTTCATCTCAACCTTTAGTTGGTCTTATGATGAATATGAGAAGTAATACCGATGAAAAGCTTGTTGCTGCCCTTTGCTCGAATCTTGCTGGTGGTCAAGGGTTATCACGTAGGAAGCTTTATATAGCTGATGCAAGGCCTAGAAAAAATGCTTTAGCAAATGGAGCCATGGGAGGTGGCTCAGAGTCTTCATCAAATTATTTTCAATCTGAGATAGTCTTTTTTGGGATTGACAACATACATGCAATGAGGGAAAGTCTTACTCGGCTCAGAGAGTACTTGGATACTCATGGTGAAAAATCATCTGATGGAATGTCATCATTCTTGAGACATGGTGGATGGACTTGGGGTGGGGGTAATCTTAGTAGCATGTCTGCATCTGTATCAACTCTGGGAGATAGTGGCTGGTTAATCCATGTTCAAAGTGTCTTGGCTGGTTCAGCATGGATTGCTGCACGTGTTGCTTTGGAAAATGCAACGGTGCTAGTTCATTGCAGTGACGGCTGGGACAGAACAACACAACTAGTTTCACTTGCTAGCTTACTGCTTGATCCATATTATCGGACGTTTGCTGGATTTCAGGCACTGGTTGAAAAGGATTGGCTAGCATTTGGTCATCCTTTCTCAGATCGGTCTGGCATGCCAACCATATCAGGAAGTGGTAACATGCCATATGAACTATCTAGGCAGTCTTCAACTGGAAGTTTTTCTTCTTCACCTTTGCGTCAGCCATCAGGTGCATTCATATCTCAAGCTTCCAGTCCTCCTCATGCTCAAACATCAAACAACTGTTCTCCCATATTTTTACAGTGGGTTGATTGTGTTTCACAACTTCTGCGCATGTATCCCTTTGCGTTTGAGTTCTCTTCAGCATTCCTTGTGGATTTGTTGGATTGTATGCTTTCCTGTCGCTTTGGGAACTTCTTATGCAATTGTGAGAAGGAGCGGCAGCAATGTGCAGTTTCTGAAGTTTGCGGCTGTCTATGGGCGTATTTAGCTGATTTACGAGCCTCAGAAGGAAGTTCGCATGTGCATCATAACCTCTTTTATGATCCTACCAAACATGAAGGTCCTCTCTTACCTCCTGCAGCATCTCTAGCTCCAACTCTCTGGCCACAATTCCATCTTCGTTGGGCTTGTCCAAAAGAATCCCAAGCTGGGGAACTTGAAGTCAAATGCAGGAAAATGGCTATAAAATTCTCTGAAATGCAGAAGGACAAAGAAATAGCTGAGAGAAAAGCCCAGGAGATGACGGCTGCCATGGAATCATTAAAATCTGAGTTGCAAAGCGAGAAACAGTTAAGTATATCTGCTAGGAATGCTGCAAAAAGTGCAAGCAAAGAATGCGAAGCCATAAAGAGAGCAATTCAGTCTCTAGGTTGCAAGGTTCAAGTCTCTAGTAATGGTTATTGTACTGTTGATATTGAGGGCGACCTGATGAAAAAATCCAACCAGAAAAGTCATCCTGCTTCAAGAAGGACTTCACATCGTTCGCTGCCACGCCCTAGTGAAGAGAATGACCTCTCCCTTTCTATCACAGTTACAGCAGATGATGTGCCAAGTAACCCCCTCAGTCACATCTGTGAAGCTCTTTGCCCATTACGCACTCGGGATGGAGGGTGCCGATGGCCTGATGCTGGTTGTGCTCATTTGGGTAGCCAATTTATTGGACTGAAGGCAAATTTCGACGCATTCGATCAACTATCCATATATGATGGTTATTTCAAGCCAGAGTGA 2574 43.98 MATPKPRTTRSRSHRDIPDLEKMDAAYSWDALEWTKIEPVPRSVSRVNLDCLLEAEQVIAEGYGVVLVNTDEAGTLFVTNFRLLFLSEGTMDVIALGTIPLATIDKFNKIVVKTNAVSRQSEKSSPSRRLLQVIGKDMRIIVFGFRPRTKQRRKVYDALLRCMKPARIWDLYAFQSGPSKYCNTDPKVRLLNEYFRLLGKGSLHASMSMIEDGSFTLSNELWRITKINSNYTLCQSYPFALVVPKHISDEEMLQASTFRARCRLPVVSWCNPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCSNLAGGQGLSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESLTRLREYLDTHGEKSSDGMSSFLRHGGWTWGGGNLSSMSASVSTLGDSGWLIHVQSVLAGSAWIAARVALENATVLVHCSDGWDRTTQLVSLASLLLDPYYRTFAGFQALVEKDWLAFGHPFSDRSGMPTISGSGNMPYELSRQSSTGSFSSSPLRQPSGAFISQASSPPHAQTSNNCSPIFLQWVDCVSQLLRMYPFAFEFSSAFLVDLLDCMLSCRFGNFLCNCEKERQQCAVSEVCGCLWAYLADLRASEGSSHVHHNLFYDPTKHEGPLLPPAASLAPTLWPQFHLRWACPKESQAGELEVKCRKMAIKFSEMQKDKEIAERKAQEMTAAMESLKSELQSEKQLSISARNAAKSASKECEAIKRAIQSLGCKVQVSSNGYCTVDIEGDLMKKSNQKSHPASRRTSHRSLPRPSEENDLSLSITVTADDVPSNPLSHICEALCPLRTRDGGCRWPDAGCAHLGSQFIGLKANFDAFDQLSIYDGYFKPE 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18838028 18851740 - CaPI482276_08g012490.1 Cam08g1249 133300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1249 857 SMART gram2001c 43 111 IPR004182 -
Cam08g1249 857 CDD PTP-MTM-like 262 556 - -
Cam08g1249 857 Gene3D - 63 163 IPR011993 -
Cam08g1249 857 ProSitePatterns Tyrosine specific protein phosphatases active site. 442 452 IPR016130 GO:0016311(InterPro)
Cam08g1249 857 MobiDBLite consensus disorder prediction 761 787 - -
Cam08g1249 857 Pfam Myotubularin-like phosphatase domain 216 596 IPR010569 -
Cam08g1249 857 SUPERFAMILY PH domain-like 51 175 - -
Cam08g1249 857 Coils Coil 679 713 - -
Cam08g1249 857 PANTHER MYOTUBULARIN-RELATED 50 791 IPR030564 GO:0004438(PANTHER)|GO:0106018(PANTHER)
Cam08g1249 857 ProSiteProfiles Myotubularin phosphatase domain. 199 654 IPR010569 -
Cam08g1249 857 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 216 658 IPR029021 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1249 K18081 - csv:101204839 1652.11