Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1304 ATGGGGATTCAAACTATGGGGTCTCAGGCCGGAGGTGATCCAAATGGCAAACAATCACAATTCCAGCCATTGGTTCGTCAAAATTCACTGTATAGTCTCACACTGGATGAGGTTCAAAATCAGTTGGGTGATCTAGGAAAGCCTTTAATCAGCATGAACCTTGATGAGCTTCTTAAAAATGTGTGGACTGCTGAGGCCAACCAAACTGTTGGTAAAGACAATGAGGACAATAATGTCTTGGCCAATCAAACATCCCTACAACGTCAGGCTAGTCTTTCATTGAATGGTGCTCTGAGTAAAAAGACTGTCGATGAGGTGTGGAGAGACATTCAACAAAGCAAAGACAGTGAGGAGAAGAAGTCTCGTGAACGGCAACCTACGTTGGGAGAGATGACATTGGAAGATTTTCTGGTGAAAGCAGGGGTGGTTGCTGAGACATCGTCAAATAAAAAAGGTGCGGGTCCTGTTGTTGAAATTGACGCAAATATCACACCCCAGTTCCAACAAACGCAGTGGATGCCGTACCCTCAACCTCAGTATCAGTCTCAACAAGCAGCAATGATGGGGGTTTACATGTCAGGCCAGCCTATTCCCCAGCCACTGCATGTGGGAGGTGGTGCCGTGATGGATGTTCCATATGTAGACAACCAGTTGGCATTGCCAACTCCTTTGATGGGAGCTTTATCTGATACACAGACATCTGGAAGAAAAAGGGGAGCGCCTGAAGACATGATTGAGAAAACTGTCGAGCGTAGACAGAAGAGGATGATAAAGAATCGGGAATCTGCCGCTCGTTCACGAGCAAGGAAGCAGGCATATACCAATGAACTGGAGAATAAAGTTTCACGTTTGGAAGAGGAGAATGAAAGGCTCAGGAAACGGAAGGAGCTGGAAAAGATGCTACCGTTGGCTCCCTCGCCTGAGCCGAACCCAGCCCAAAGAAGCCCAAAGATTGGTCGAAGGGAAATTCAAAACGAAATGTCGGCTTCGACCGTCTCAATAACGGCGAATCCGGCGGCGCGGAGGAGGCCGGTTTTGGCCTCCGAGAAGAAGGGGACAAGTATTGAATTGTTGGCCACTGATGGCGTTAACCCTCTTTCGAATACTGCTACTATCGGGACTGGCGGTGCCGCCGATGATAAAGTCGCCGGTGGAAATGGTAGGGATATGAGTCATCATTCGATTAGGGGTGAGGTTGTTCTCGAGCGGTCTTCTAGGGATCCACTTCAGATCAAGAAAGCTGTTGCGAATTCTACCATCTCCCCGCGGCGGAGTAGAAAGGTACTTACGAAGCCGGAGAAGCCTCGATGGGTCACTATTCTTAGCGTCTTTACGAAGAATTTTGTGCTTTTGATGGTTCTTTTGGGATTGGCTCAAATGATTAGGAAATTAGCCCTAAAGTCTGGTGAAGGAACGGTGGGAAATCAGATGGGGTTTTCGGAAGTCGAGGGGCGGATTGCGGAAGTTGAAGCACTCTTGAAGACTACCAGTAAGATGCTTCAGGTGCAGGTGGAGGTCGTTGATCGGAAGATTGAGAATGAGGTCGGGGGATTGAGAAGGGAGGTTAACAAGAAGATTGAGGAGAAAACTGCTGATCTTGAGAGCGGTTTGAAGACGCTGCAGAACAAGGGGGAAGACTTGGAAAGGTCTTTGAGCGAGTTGAAGGCTGGGGATTGGTTGTCGAAGCAAGAATTTGATAAAATTTATGAGGAATTGAAGAAGGCCAAAAACGGTGAATTTGATGAGCGATTTGCGAATTTGGATGATATAAGGGCTTATGCAAGGGAAATGATTGAGAGGGAGATTCAGAAGCATGCGGCTGATGGGCTTGGTAGAGTGGATTATGCTGTTGCTTCTGGTGGGGCAATGGTTGTAAAGCATTCGGATCCGTTTAGAGGAAGAACAAGTAATTGGTTTTCGAAAAGTGTGAGGAATGGGGTTCACAGTGATGCGGATAAGCTGCTGAAGCCGAGCTTTGGGGAGCCCGGGCACTGCTTCCCCTTGAAAGGAAGTAGTGGGTTCGTTCAAATTAAGCTGCGGACAGCAATTGTTCCAGAAGCTATTACTTTGGAGCATGTTGCCAAGAGTGTAGCATTTGATAGATCAAGCGCACCTAAGGATTGCAGGGTATCTGGATGGTTTCAAGGGGACGATGCAAATTCAGCTATTGATGCTGAGAAGATGTTCCTCTTGGCCGAGTTTACATATGACCTCGAGAAGAGCAATGCCCAGACATTCGACGTGGTGGAGTCAACAGGCTCTAGTCTCGTTGACATGATCCGATTAGATTTCTCATCCAACCACGGAAGCCTTCATGAGGGATGGGCTGCAGCCTTGCATCCAGCTTGTATTGGGTTCCAAGTTTGTATTATCCTTTGCAGTGCAGGCATGTTGATTCCTAAAGCTTCTCAGTCTTATTCAAAGGTGAGCTCTTAA 2436 47.45 MGIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNVWTAEANQTVGKDNEDNNVLANQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKDSEEKKSRERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQFQQTQWMPYPQPQYQSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLALPTPLMGALSDTQTSGRKRGAPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPLAPSPEPNPAQRSPKIGRREIQNEMSASTVSITANPAARRRPVLASEKKGTSIELLATDGVNPLSNTATIGTGGAADDKVAGGNGRDMSHHSIRGEVVLERSSRDPLQIKKAVANSTISPRRSRKVLTKPEKPRWVTILSVFTKNFVLLMVLLGLAQMIRKLALKSGEGTVGNQMGFSEVEGRIAEVEALLKTTSKMLQVQVEVVDRKIENEVGGLRREVNKKIEEKTADLESGLKTLQNKGEDLERSLSELKAGDWLSKQEFDKIYEELKKAKNGEFDERFANLDDIRAYAREMIEREIQKHAADGLGRVDYAVASGGAMVVKHSDPFRGRTSNWFSKSVRNGVHSDADKLLKPSFGEPGHCFPLKGSSGFVQIKLRTAIVPEAITLEHVAKSVAFDRSSAPKDCRVSGWFQGDDANSAIDAEKMFLLAEFTYDLEKSNAQTFDVVESTGSSLVDMIRLDFSSNHGSLHEGWAAALHPACIGFQVCIILCSAGMLIPKASQSYSKVSS 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19334654 19350405 + CaPI482276_08g013040.1 Cam08g1304 133355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1304 811 SMART brlzneu 247 306 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1304 811 Coils Coil 523 557 - -
Cam08g1304 811 SUPERFAMILY Leucine zipper domain 251 296 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1304 811 CDD bZIP_plant_BZIP46 251 305 - -
Cam08g1304 811 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 254 269 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1304 811 PANTHER SAD1/UNC-84-LIKE PROTEIN-RELATED 256 770 IPR045119 GO:0005635(PANTHER)|GO:0043495(PANTHER)
Cam08g1304 811 Pfam bZIP transcription factor 251 298 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1304 811 Pfam Sad1 / UNC-like C-terminal 651 771 IPR012919 -
Cam08g1304 811 MobiDBLite consensus disorder prediction 1 20 - -
Cam08g1304 811 Gene3D - 249 302 - -
Cam08g1304 811 Coils Coil 267 301 - -
Cam08g1304 811 ProSiteProfiles SUN domain profile. 619 788 IPR012919 -
Cam08g1304 811 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 249 294 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g1304 811 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 249 301 - -
Cam08g1304 811 Gene3D - 590 773 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1450 Cam-Chr3:29378211 Cam08g1304 Cam-Chr8:19334654 1.00E-48 dispersed
Cam08g1304 Cam-Chr8:19334654 Cam10g1865 Cam-Chr10:32699776 1.90E-29 dispersed
Cam08g1304 Cam-Chr8:19334654 Cam08g2074 Cam-Chr8:26280987 6.90E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52413 PF07738 Sad1_UNC 2.10E-27 CL0202 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1304 K19347 - csv:101214156 783.867