Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam08g1304 | ATGGGGATTCAAACTATGGGGTCTCAGGCCGGAGGTGATCCAAATGGCAAACAATCACAATTCCAGCCATTGGTTCGTCAAAATTCACTGTATAGTCTCACACTGGATGAGGTTCAAAATCAGTTGGGTGATCTAGGAAAGCCTTTAATCAGCATGAACCTTGATGAGCTTCTTAAAAATGTGTGGACTGCTGAGGCCAACCAAACTGTTGGTAAAGACAATGAGGACAATAATGTCTTGGCCAATCAAACATCCCTACAACGTCAGGCTAGTCTTTCATTGAATGGTGCTCTGAGTAAAAAGACTGTCGATGAGGTGTGGAGAGACATTCAACAAAGCAAAGACAGTGAGGAGAAGAAGTCTCGTGAACGGCAACCTACGTTGGGAGAGATGACATTGGAAGATTTTCTGGTGAAAGCAGGGGTGGTTGCTGAGACATCGTCAAATAAAAAAGGTGCGGGTCCTGTTGTTGAAATTGACGCAAATATCACACCCCAGTTCCAACAAACGCAGTGGATGCCGTACCCTCAACCTCAGTATCAGTCTCAACAAGCAGCAATGATGGGGGTTTACATGTCAGGCCAGCCTATTCCCCAGCCACTGCATGTGGGAGGTGGTGCCGTGATGGATGTTCCATATGTAGACAACCAGTTGGCATTGCCAACTCCTTTGATGGGAGCTTTATCTGATACACAGACATCTGGAAGAAAAAGGGGAGCGCCTGAAGACATGATTGAGAAAACTGTCGAGCGTAGACAGAAGAGGATGATAAAGAATCGGGAATCTGCCGCTCGTTCACGAGCAAGGAAGCAGGCATATACCAATGAACTGGAGAATAAAGTTTCACGTTTGGAAGAGGAGAATGAAAGGCTCAGGAAACGGAAGGAGCTGGAAAAGATGCTACCGTTGGCTCCCTCGCCTGAGCCGAACCCAGCCCAAAGAAGCCCAAAGATTGGTCGAAGGGAAATTCAAAACGAAATGTCGGCTTCGACCGTCTCAATAACGGCGAATCCGGCGGCGCGGAGGAGGCCGGTTTTGGCCTCCGAGAAGAAGGGGACAAGTATTGAATTGTTGGCCACTGATGGCGTTAACCCTCTTTCGAATACTGCTACTATCGGGACTGGCGGTGCCGCCGATGATAAAGTCGCCGGTGGAAATGGTAGGGATATGAGTCATCATTCGATTAGGGGTGAGGTTGTTCTCGAGCGGTCTTCTAGGGATCCACTTCAGATCAAGAAAGCTGTTGCGAATTCTACCATCTCCCCGCGGCGGAGTAGAAAGGTACTTACGAAGCCGGAGAAGCCTCGATGGGTCACTATTCTTAGCGTCTTTACGAAGAATTTTGTGCTTTTGATGGTTCTTTTGGGATTGGCTCAAATGATTAGGAAATTAGCCCTAAAGTCTGGTGAAGGAACGGTGGGAAATCAGATGGGGTTTTCGGAAGTCGAGGGGCGGATTGCGGAAGTTGAAGCACTCTTGAAGACTACCAGTAAGATGCTTCAGGTGCAGGTGGAGGTCGTTGATCGGAAGATTGAGAATGAGGTCGGGGGATTGAGAAGGGAGGTTAACAAGAAGATTGAGGAGAAAACTGCTGATCTTGAGAGCGGTTTGAAGACGCTGCAGAACAAGGGGGAAGACTTGGAAAGGTCTTTGAGCGAGTTGAAGGCTGGGGATTGGTTGTCGAAGCAAGAATTTGATAAAATTTATGAGGAATTGAAGAAGGCCAAAAACGGTGAATTTGATGAGCGATTTGCGAATTTGGATGATATAAGGGCTTATGCAAGGGAAATGATTGAGAGGGAGATTCAGAAGCATGCGGCTGATGGGCTTGGTAGAGTGGATTATGCTGTTGCTTCTGGTGGGGCAATGGTTGTAAAGCATTCGGATCCGTTTAGAGGAAGAACAAGTAATTGGTTTTCGAAAAGTGTGAGGAATGGGGTTCACAGTGATGCGGATAAGCTGCTGAAGCCGAGCTTTGGGGAGCCCGGGCACTGCTTCCCCTTGAAAGGAAGTAGTGGGTTCGTTCAAATTAAGCTGCGGACAGCAATTGTTCCAGAAGCTATTACTTTGGAGCATGTTGCCAAGAGTGTAGCATTTGATAGATCAAGCGCACCTAAGGATTGCAGGGTATCTGGATGGTTTCAAGGGGACGATGCAAATTCAGCTATTGATGCTGAGAAGATGTTCCTCTTGGCCGAGTTTACATATGACCTCGAGAAGAGCAATGCCCAGACATTCGACGTGGTGGAGTCAACAGGCTCTAGTCTCGTTGACATGATCCGATTAGATTTCTCATCCAACCACGGAAGCCTTCATGAGGGATGGGCTGCAGCCTTGCATCCAGCTTGTATTGGGTTCCAAGTTTGTATTATCCTTTGCAGTGCAGGCATGTTGATTCCTAAAGCTTCTCAGTCTTATTCAAAGGTGAGCTCTTAA | 2436 | 47.45 | MGIQTMGSQAGGDPNGKQSQFQPLVRQNSLYSLTLDEVQNQLGDLGKPLISMNLDELLKNVWTAEANQTVGKDNEDNNVLANQTSLQRQASLSLNGALSKKTVDEVWRDIQQSKDSEEKKSRERQPTLGEMTLEDFLVKAGVVAETSSNKKGAGPVVEIDANITPQFQQTQWMPYPQPQYQSQQAAMMGVYMSGQPIPQPLHVGGGAVMDVPYVDNQLALPTPLMGALSDTQTSGRKRGAPEDMIEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKRKELEKMLPLAPSPEPNPAQRSPKIGRREIQNEMSASTVSITANPAARRRPVLASEKKGTSIELLATDGVNPLSNTATIGTGGAADDKVAGGNGRDMSHHSIRGEVVLERSSRDPLQIKKAVANSTISPRRSRKVLTKPEKPRWVTILSVFTKNFVLLMVLLGLAQMIRKLALKSGEGTVGNQMGFSEVEGRIAEVEALLKTTSKMLQVQVEVVDRKIENEVGGLRREVNKKIEEKTADLESGLKTLQNKGEDLERSLSELKAGDWLSKQEFDKIYEELKKAKNGEFDERFANLDDIRAYAREMIEREIQKHAADGLGRVDYAVASGGAMVVKHSDPFRGRTSNWFSKSVRNGVHSDADKLLKPSFGEPGHCFPLKGSSGFVQIKLRTAIVPEAITLEHVAKSVAFDRSSAPKDCRVSGWFQGDDANSAIDAEKMFLLAEFTYDLEKSNAQTFDVVESTGSSLVDMIRLDFSSNHGSLHEGWAAALHPACIGFQVCIILCSAGMLIPKASQSYSKVSS | 811 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 19334654 | 19350405 | + | CaPI482276_08g013040.1 | Cam08g1304 | 133355 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam08g1304 | 811 | SMART | brlzneu | 247 | 306 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam08g1304 | 811 | Coils | Coil | 523 | 557 | - | - | |
Cam08g1304 | 811 | SUPERFAMILY | Leucine zipper domain | 251 | 296 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam08g1304 | 811 | CDD | bZIP_plant_BZIP46 | 251 | 305 | - | - | |
Cam08g1304 | 811 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 254 | 269 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam08g1304 | 811 | PANTHER | SAD1/UNC-84-LIKE PROTEIN-RELATED | 256 | 770 | IPR045119 | GO:0005635(PANTHER)|GO:0043495(PANTHER) | |
Cam08g1304 | 811 | Pfam | bZIP transcription factor | 251 | 298 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam08g1304 | 811 | Pfam | Sad1 / UNC-like C-terminal | 651 | 771 | IPR012919 | - | |
Cam08g1304 | 811 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Cam08g1304 | 811 | Gene3D | - | 249 | 302 | - | - | |
Cam08g1304 | 811 | Coils | Coil | 267 | 301 | - | - | |
Cam08g1304 | 811 | ProSiteProfiles | SUN domain profile. | 619 | 788 | IPR012919 | - | |
Cam08g1304 | 811 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 249 | 294 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cam08g1304 | 811 | FunFam | ABSCISIC ACID-INSENSITIVE 5-like protein 2 | 249 | 301 | - | - | |
Cam08g1304 | 811 | Gene3D | - | 590 | 773 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g1450 | Cam-Chr3:29378211 | Cam08g1304 | Cam-Chr8:19334654 | 1.00E-48 | dispersed | |
Cam08g1304 | Cam-Chr8:19334654 | Cam10g1865 | Cam-Chr10:32699776 | 1.90E-29 | dispersed | |
Cam08g1304 | Cam-Chr8:19334654 | Cam08g2074 | Cam-Chr8:26280987 | 6.90E-32 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52413 | PF07738 | Sad1_UNC | 2.10E-27 | CL0202 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam08g1304 | K19347 | - | csv:101214156 | 783.867 |