Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1381 ATGGGCGGCGGTGGCGGTAGCAGCGGTGTTGTGCCAAGTAGGGAGTTAGATCAAACTCCGACATGGGCCGTTGCCTCTGTTTGTGCAATCATCATTCTTATTTCCATTATATTGGAAAAGGTTCTTCACATGGTTGGAGAGCTATTCCAAAAAAGGAAAAAGAAAGCATTGTATGAAGCGCTTGAGAAAGTTAAAGGCGAGCTTATGGTTTTAGGATTCATTTCTTTGCTCTTAACATTCGGACAAAATTATATTGCTAAAGTTTGCATACCCTCAAAATATGCAAATACTATGTTGCCTTGCCCTTATAGAGGGACTCTACCTAAAAGCTCCCACGGCCTCGAGCCTCAAGATCACGACGAAGAGACTACAGATCATCACCGTAGGCTTCTTTGGTACGAGCATCGACGTCGTCTTGGTGGCGGTGCTTCCGTAGCAAGTTGCAAATCAGGGTATACACAACTTATATCTTTAAATGGTTTGCATCAAATACATATCTTCATCTTCTTTCTAGCCGTCCTCCATGTTGTATTTAGCGGCATAACCATGACTCTTGGGAGATTGAAAATTCGTGGGTGGAAGGTTTGGGAAAAACAGACTGAACAAGAACATGACGCCATGAACGATCCTACAAGGTTCAGACTTACTCACGAGACTTCCTTTGTTAGAGATCACAGCAGTTTTTGGACCAAAACACCCCTCTCCTTTTACTTTGTATGCTTTTGGAGGCAATTCCTGAGGTCCGTTAGTAGGGCAGATTACTTGTCTCTTAGACATGGTTTTGTCACTGTTCATTTAGCCCCGGGGAGTAAATTTGACTTTCAAAAGTACATCAAAAGATCATTAGAAGATGACTTTAAGGTGGTCGTGGGAATCAGTCCTCTACTATGGGCATCAATGGTGCTTTTTCTACTTCTCAATGTTAGTGGGTGGCAAGTTATGTTTTGGGTGTCCATATTTCCTCTAGTGGTGATCTTAGCCGTTGGAACAAAGCTGCAAGGAATTATAACACAAATGGCTCTTGAAATCAAGGAAAGACATGCAGTGGTTCAAGGGATTCCCCTCGTCCAAGTCTCCGATAGACACTTTTGGTTTAGTTGGCCGGTTTTGGTTCTTTATCTCATCCATTATGTCCTCTTCCAGAATGCATTTGAGATTACATATTTCTTTTGGATATGGTATGAATTTGGGTTGAGATCATGTTTTCACGACAATTTTGATCTTATTATCATCAGAGTTGCCCTTGGGGTTGGAGTCCAAATTTTGTGCAGCTACATTACACTTCCATTATACGCACTTGTTACTCAGATGGGATCAACGATGAAGAAATCCATATTTGATGAACAAACTTCAAAAGCATTAAAGCAATGGCATAGAAGTGCTTTGAAGAAAAAGAACGAAGGGGGAAAGCCCGATTCAACGCCGATGCGAACTTTAGGCGGCGGCGGCGGAGGAGGAGGAAGCCCCCCCGAGTCACCGACGCACTCCCCGCGTGAATTCCAACATCAATTGGTCTCTCAACCGTTGCCAACCGACGTCGAAGCCTCCACCATTCCTTCAGCCAACATAATGACCACCGTTGATCTCCATCAACATCAGCAAAACTATACCAATCGTGACTTGTTGAGCTGA 1632 43.44 MGGGGGSSGVVPSRELDQTPTWAVASVCAIIILISIILEKVLHMVGELFQKRKKKALYEALEKVKGELMVLGFISLLLTFGQNYIAKVCIPSKYANTMLPCPYRGTLPKSSHGLEPQDHDEETTDHHRRLLWYEHRRRLGGGASVASCKSGYTQLISLNGLHQIHIFIFFLAVLHVVFSGITMTLGRLKIRGWKVWEKQTEQEHDAMNDPTRFRLTHETSFVRDHSSFWTKTPLSFYFVCFWRQFLRSVSRADYLSLRHGFVTVHLAPGSKFDFQKYIKRSLEDDFKVVVGISPLLWASMVLFLLLNVSGWQVMFWVSIFPLVVILAVGTKLQGIITQMALEIKERHAVVQGIPLVQVSDRHFWFSWPVLVLYLIHYVLFQNAFEITYFFWIWYEFGLRSCFHDNFDLIIIRVALGVGVQILCSYITLPLYALVTQMGSTMKKSIFDEQTSKALKQWHRSALKKKNEGGKPDSTPMRTLGGGGGGGGSPPESPTHSPREFQHQLVSQPLPTDVEASTIPSANIMTTVDLHQHQQNYTNRDLLS 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20095875 20102957 - CaPI482276_08g013810.1 Cam08g1381 133432

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1381 543 PANTHER MLO-LIKE PROTEIN 1 13 502 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cam08g1381 543 MobiDBLite consensus disorder prediction 462 517 - -
Cam08g1381 543 MobiDBLite consensus disorder prediction 494 517 - -
Cam08g1381 543 Pfam Mlo family 14 476 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1381 K08472 - - csv:101208890 962.985
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2152 Cam-Chr1:34286872 Cam08g1381 Cam-Chr8:20095875 5.20E-175 dispersed
Cam03g0232 Cam-Chr3:3372246 Cam08g1381 Cam-Chr8:20095875 8.50E-133 dispersed
Cam06g0173 Cam-Chr6:3595136 Cam08g1381 Cam-Chr8:20095875 5.30E-102 dispersed
Cam08g1381 Cam-Chr8:20095875 Cam10g0014 Cam-Chr10:1788118 8.70E-156 dispersed
Cam08g1381 Cam-Chr8:20095875 Cam09g1923 Cam-Chr9:33944687 5.40E-89 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g64 . . . . . . . . Cmo05g00988 . . . . . . . . . . . . . . . Cla08g00934 Cam08g1381 Cec08g0962 Cco08g1081 Clacu08g1088 . Cre08g0871 Cone4ag2032 . . . . . . . . Blo18g00738 . Bda01g01568 Bpe02g01762 Bpe05g00178 Bma01g00695 . . . . . . Car05g00852 . Cpe11g00780 . . . . . . . . . . . . . . . . . . .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cam09g1923 . 3 553 MLO family AT5G53760 69.7 1.0e-218 756.5
Cam11g1837 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cam05g1118 . 7 466 MLO family AT5G53760 51.1 2.6e-126 449.5
Cam09g1923 . 3 553 MLO family AT1G26700 68.0 6.7e-212 733.8
Cam11g1837 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cam03g0232 . 8 536 MLO family AT2G39200 63.8 1.2e-192 669.8
Cam05g2289 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cam02g2174 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cam02g2174 . 1 416 MLO family AT1G61560 65.9 5.8e-160 560.8
Cam03g0232 . 1 416 MLO family AT1G61560 66.3 2.7e-157 552.0
Cam05g2289 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cam01g2152 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cam01g2152 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cam10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cam08g1381 . 4 480 MLO family AT2G17430 58.3 2.9e-151 532.3
Cam01g2152 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cam10g0014 . 5 574 MLO family AT2G17480 59.0 2.6e-177 619.0
Cam08g1381 . 11 465 MLO family AT2G17480 60.6 2.2e-152 536.2
Cam03g0232 . 8 463 MLO family AT2G17480 52.6 2.3e-125 446.4
Cam02g2174 . 8 463 MLO family AT2G17480 50.3 2.5e-124 443.0
Cam08g1381 . 1 381 MLO family AT1G42560 59.7 4.1e-128 454.9
Cam01g2152 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cam10g0014 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cam06g0173 . 6 419 MLO family AT4G24250 54.2 5.9e-117 417.9
Cam02g0035 . 10 421 MLO family AT4G24250 50.9 5.2e-113 404.8
Cam01g2152 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cam10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cam08g1381 . 7 381 MLO family AT5G65970 58.0 1.1e-120 430.6
Cam02g2174 . 2 381 MLO family AT5G65970 51.8 5.6e-106 381.7
Cam03g0232 . 2 381 MLO family AT5G65970 50.9 2.2e-102 369.8
Cam08g1381 . 2 543 MLO family AT2G33670 59.9 3.9e-174 608.2
Cam01g2152 . 20 470 MLO family AT2G33670 61.6 5.1e-158 554.7
Cam10g0014 . 29 471 MLO family AT2G33670 58.7 9.6e-141 497.3
Cam05g2289 . 64 525 MLO family AT1G11310 64.3 2.2e-169 592.4
Cam03g0232 . 63 506 MLO family AT1G11310 64.9 4.4e-165 578.2
Cam02g2174 . 63 520 MLO family AT1G11310 62.7 6.9e-163 570.9
Cam06g0173 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
Cam06g0173 . 1 508 MLO family AT4G02600 72.9 8.9e-214 740.0
Cam05g1118 . 3 560 MLO family AT1G11000 67.0 4.8e-213 737.6
Cam10g0066 . 1 494 MLO family AT1G11000 51.9 7.9e-131 464.5
Cam06g0173 . 1 508 MLO family AT4G02600 72.9 8.9e-214 740.0
Cam05g2289 . 64 525 MLO family AT1G11310 64.3 2.2e-169 592.4
Cam03g0232 . 63 506 MLO family AT1G11310 64.9 4.4e-165 578.2
Cam02g2174 . 63 520 MLO family AT1G11310 62.7 6.9e-163 570.9
Cam05g1118 . 3 560 MLO family AT1G11000 67.0 4.8e-213 737.6
Cam10g0066 . 1 494 MLO family AT1G11000 51.9 7.9e-131 464.5
Cam08g1381 . 2 543 MLO family AT2G33670 59.9 3.9e-174 608.2
Cam01g2152 . 20 470 MLO family AT2G33670 61.6 5.1e-158 554.7
Cam10g0014 . 29 471 MLO family AT2G33670 58.7 9.6e-141 497.3
Cam02g2174 . 1 416 MLO family AT1G61560 65.9 5.8e-160 560.8
Cam03g0232 . 1 416 MLO family AT1G61560 66.3 2.7e-157 552.0
Cam05g2289 . 7 408 MLO family AT1G61560 65.2 9.0e-153 537.0
Cam01g2152 . 28 422 MLO family AT1G61560 52.2 2.0e-115 412.9
Cam01g2152 . 18 490 MLO family AT2G17430 63.4 3.0e-172 602.1
Cam10g0014 . 29 490 MLO family AT2G17430 63.4 1.5e-160 563.1
Cam08g1381 . 4 480 MLO family AT2G17430 58.3 2.9e-151 532.3
Cam01g2152 . 7 567 MLO family AT2G17480 63.4 1.1e-196 683.3
Cam10g0014 . 5 574 MLO family AT2G17480 59.0 2.6e-177 619.0
Cam08g1381 . 11 465 MLO family AT2G17480 60.6 2.2e-152 536.2
Cam03g0232 . 8 463 MLO family AT2G17480 52.6 2.3e-125 446.4
Cam02g2174 . 8 463 MLO family AT2G17480 50.3 2.5e-124 443.0
Cam08g1381 . 1 381 MLO family AT1G42560 59.7 4.1e-128 454.9
Cam01g2152 . 28 386 MLO family AT1G42560 58.7 1.4e-120 429.9
Cam10g0014 . 29 388 MLO family AT1G42560 56.5 2.1e-111 399.4
Cam01g2152 . 8 387 MLO family AT5G65970 66.8 8.0e-145 510.8
Cam10g0014 . 28 388 MLO family AT5G65970 66.2 4.0e-136 481.9
Cam08g1381 . 7 381 MLO family AT5G65970 58.0 1.1e-120 430.6
Cam02g2174 . 2 381 MLO family AT5G65970 51.8 5.6e-106 381.7
Cam03g0232 . 2 381 MLO family AT5G65970 50.9 2.2e-102 369.8
Cam09g1923 . 3 553 MLO family AT5G53760 69.7 1.0e-218 756.5
Cam11g1837 . 5 551 MLO family AT5G53760 69.2 3.6e-216 748.0
Cam05g1118 . 7 466 MLO family AT5G53760 51.1 2.6e-126 449.5
Cam03g0232 . 8 536 MLO family AT2G39200 63.8 1.2e-192 669.8
Cam05g2289 . 7 499 MLO family AT2G39200 67.7 8.0e-192 667.2
Cam02g2174 . 8 505 MLO family AT2G39200 67.1 1.2e-190 663.3
Cam06g0173 . 6 419 MLO family AT4G24250 54.2 5.9e-117 417.9
Cam02g0035 . 10 421 MLO family AT4G24250 50.9 5.2e-113 404.8
Cam09g1923 . 3 553 MLO family AT1G26700 68.0 6.7e-212 733.8
Cam11g1837 . 1 532 MLO family AT1G26700 68.3 1.8e-209 725.7
Cam06g0173 . 5 501 MLO family AT2G44110 59.5 1.9e-165 579.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000765 3 4 3 4 2 3 4 3 3 3 2 3 4 3 3 4 2 3 4 3 3 3 3 3 3 3 2 6 2 2 93