Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1452 ATGGAGGAAATGTCCCCGGCGGTTGTGGTGCCATTTAGGTTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAACTCCCATGGATATCACAAGACTTAAGCTAATGGCAGATACTGCTGGTTTGTTATCTGATTCTGTGACTAAGGCTTCTGATGACCTGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTGGTATCACTACAGTTTCGGGTATGAATGACAAGTGTGAAGGAGTTCCATTGTCAGTTGTGTTATCTCAAAATAATAGCAGTTGGGTTCCGGCAGATGAGTCAATATCCCATGGAAGTGAGGAAGATGATTCTTTATCTCTAGAGGGCGATCACATTTATGATAGCTCTTGTTCACATTCAGTGATTAGTGAGAATAGCAGCATTTGTGGTGATGATTTTTTAGGTTCTGAGGTGTCTTCTTTTGAAGCATTTGATTCCATCAGCAATCAAAAGGACATTAGCAGCGTTGAGATTGCAGCTAAAGCCAATATTGAAGAGACTAATGTTGAAAGTCTTGACTCTCAGATTGCGAGTTCTTCTTCTGCAGCAGCTAGCCTTGAAGAAGATGTTGGAGATGGGCTAGGCACTGAAGCATGTAATAACACGGTTCTTCAGCTGCCTCTTGAGAAAAAGGCAAGCGAACCAGTCAGTCGAAGTGTTTTTGAGGTAGATTGTGTTCCCCTTTGGGGATTTACATCGGTTTGTGGAAGAAGACCCGAGATGGAAGATGCAGTGGCAACTGTACCTAGGTTTTCAGAACTTCCTGTCCAAATGCTTGTTGGTGACCGAGTTCTTGATGGCTCAAACAAGGCTATAGCTCACCAAACCGTTCATTTTTTTGGGGTTTATGATGGTCATGGTGGCTCTCAGGTTGCAAATTTTTGTCGTGAACGTATGCATTTGGCTTTATCTGAGGAGATAGAACTTGCTAAGCAAGAAATAGCCGTTGGCAATGTTAAGGATAATTGCCAAGAGCTATGGAGAAAGGCATTCACCAACTGTTTTCTTAAAGTTGATGCTGAAATTGGAGGGGGACCTGGTGTTGAGCCTGTTGCGCCAGAAACTGTAGGCTCCACTGCTGTTGTTGCAATTATCTGTGCCTCTCACATTATTGTTGCAAACTGTGGAGACTCAAGAGCAGTTCTTTGTCGTGGGAAAGAGCCAATGGCATTGTCTGTGGATCATAAACCAAACAGAGAAGACGAATATGAAAGGATTGAGGCTGCAGGAGGAAAGGTCATACAGTGGAACGGGCATCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATTGGTGATAGATACTTGAAACCATGGATCATCCCAGAGCCAGAAGTGATGTTCCTCCCTCGGGCAAAAGACGACGAATGCCTCGTTCTAGCGAGTGATGGTTTATGGGATGTGATGACCAATGAAGAGGTATGCGACCTGGCTCGAAGACGAATCCTACTTTGGCACAAGAAGAATGGCGTTAGTTTGCCTTCTGAGAGGGGGGTGGGGATCGATCCCGCAGCACAAGCAGCCGCAGAATACCTCTCAAACCGAGCTCTTCAAAAGGGCAGCAAAGACAACATTACGGCGCGAGGACAAGAAGCGACTTCGTTGGCCGAGAAATTTCCAAGAACCGCCTCGTCGTTCAGGCCGCTGTTGCTTCGCCGACGGCCATTTGATGGAGTGGTAATATCTCAATCAATGGGAATCAAGAGAGAGAGTAAAAGCTCCGCTTCTGCAACATCGCCGTGTGCTGATTTCAGGGCTGCATATCACAATTGTTTCAATCGATGGTACTCGGAGAAGTTTGTAAAAGGTCATTGGGATGAAGAACCCTGCGTCTCCGAGTGGCAGAAGTACAGAGCTTGCCTCTCTGAGCATTTGGATGATAAGAAGTTAAAGCGCTTCCTTGTTGATGGGAAGCAAACGGTTTACTTTCTGTTTTGTCGTGGTGAAGCTGCCCAAATTATTGAATTTTGTGGCTCAACAGTGTTACCGGGAACCCTTTTATTTGTTGAGTCTGGGAATGGTGATGGCTTAGGGGAGTCTGATGGGGGACGGTTGCTTGAGGAAATTGAGGCAATAAGTAAAGCTCTGTACTTGCACAAGGGCCACACAAACTCAATTGTTTATCCCCCTGATGGACGGCCAGGATCCCACTTGGCTGAATCAAAATCAAGATTCAACCAGGGATATCATAAGGATGGGGAATCATTGGTGGATGAAACTGAAAGAAGGTCATCATCTGCATGGAACTGGAAGAAATCTTTGAAAGCTCTTACTCATATTGGGCACCGCAAGTTCAACTGTGTATTCTATCTCAAGGTTCATTCCATAGAAGGCGTGCCTCCAAGTTTCAATGGTTATAGTTTAAGTGTACATTGGAAAAGGAAGGATGAGGTTTTGCAAACTCGTCCATCGAAGGTTTTCCAAGGCATGGCTGAATTTGATGAGACCTTGATCCACAAATGTGTGATATATGGTGGGAGAAGTTTGGCTAATCACTCGGCGAAATATGACCCTAAGCTTTACTTGATCTATGTTTCTATGCTTGGAGCACCAGGGCTTGATTTTGGGAAGCATTGGGTTGACCTCACAAGGATTTTACCTCTTACCTTGGAGGAGCTTGAGGGGGATAAATGTTCTGGGAATTGGTCGACCAGCTTTCGACTTGCAGGCAATGCAAGAGGTGCTAGCCTAAACGTCAGTTTCAGTTTTTTAGTAACCAAGGACGATCCGATGAAATTGAGCGGTCCTGAAAATGTTGTCCAACTCCTGAAGTTATTGCACCATAAGTCAAGGATTTGTAACTATGATGCACATCCTACTTCAACCAATTTAAAAGGGCCTCCAAGTCCAGATGGAAATATTTCGCATAGTCTAGAATATGAATCTATTACCTCTACTCAGATTTTTGACGAACTAAATCCAAAATTGGAGCTCTCCAAATCGATTAACCTTTTGTATAGTAAGATGGATGAGGCAGATCAGCATAAGTCAGAGCATTCAGGTTCTGAATTGGATGAGCAGCTCGAATTAAAATCTAATGAGGAAAACAAGTCTGATGAAGTAACTGGTGGAGGTAGTTATGACTCTGGTGAGTTTTCCGTTATTGAATGTGGGATTGAATTAGCTGGGACAGAAGATAGCTTGGATAAAGTTTCTGTTCCGACTATTGAGGGCTCCAAAGTAGAAACTGTTTCTTTGGATGAGATCATAGAAGACGACAAAGTTGCCATCGAGATGAAGTCAAGCGTCATGTTGAAGGATGCAGTTTGCGTTGTTCATGTAGATGACACCGCAGAGGACGACCTCGAATATGAAGAGAATAACCTAAAACTAAAAGTGGAAGAAGTTGCTTCAGATGAGTTGAGTTCAGATTCTGATCTCAAGTGGACATCACATTCGGTGGAGACTGATTCTCCATTAGCTGTTGGCAAGCTTGTCGATCATGAAAACGATATGGATGCCAAGGAGAATTGTGCTAGAACATCTCTTAGCCCAGATGACTCTTATGAATCCGTGGCCAGTGATTTTCTAAAGATGCTGGGGTTGGAGCATGGTTCTGCGAGGTTTTCAGATCCTGATATATTGTCTCCTAGAGAGCGCTTATTGAGAGAATTTGAGGAGGAATCCCTAATTTTTGGTAATCCATTATTGGATTTTACAGCTACAGAAGAGTGGCAGGATTTTGGAAGTGTTGACATGGAGTTTGCTTCTGAAAATCAAGATGAGGATTTTGATTTTTCTTCCATTTATGTTGCTGAAGAAGTACAAGAGGAGGGGCATCATCAGTCCTTGAGAAATAGAAGGAACGCCAAAATTCTTGAAGACTTGGAGACGGAACATTTAATGAGAGAATTTGGCTTAAACGAGAGAGATTTTGAGCACTCTCCACATTATAGTTCAAGTGGATTTGGAAGTCCCATTGAGTTGCCCCTAGAAGAAGAGCCATCAAAGTTATCTTCACTTGGAGAAGGTTTTGGTGCATTTCTTAAGATGTACGGTGGCGGATTTTTGCGGTCCATGAGTCCTTGGCTCTCTCAGAACACTAGCATTGGACAGAGCTTAGTCATTCAATGTTCTGAACCAGTTGTTCTACCTGCTGAAATGGGTCATGATATTATGGAGATAGCACAGAATTTAGCATTGGCAGGAACTGAAAACCTTTCGACACTTGCTAAAAAGCTGATGCCGTTGGACGATATAACCGGGAAAACTCTCCAGCAAATGGTATCAGAGTGTCCTCCCAGCAAAATATTGCTTGAGAGGGAGCCTATGATCGAGAATAACGTGTTGTGTAGTTCGGTTTCATTCTGCGAAAGGAAAGACCTCGAAGGATTGCCATCTCATCAAAACAATACTAGTCTTCAATCTCTTCTGAATTCCGAGATGGATCAAGACCTTGTGTCACCTGATGATCTAGCATTTCTGGCAATAGAAAAGATCGAAACTCTCCTAATAGAAGGATTAAGAATACAATCTGGCTTGACAAATGATGAGATGCCAGCACAAATCACTGCCCGCCCTTTTCATCGTGTGCCAGCCTGTCGACGGAGGCGTTCCAATTTGGGCGGTTCTTTTAGCTCGGAAGGATTAAAGGAACTGCAGTTTATTGATCGCCCTGATACAGCAAGTGATGTTGTTGGGTTGATGGATCTTTCTATAACGTTGGAGCACTGGTTAAGGCTTGATGCTGGTAACATTAATGACGATGATGAAAATGGTCAGCACATTATGAAGACTCTTGTGGCCCATGGTGCTAACTATGCAGATATTATTGAAAGACTATCAAAAGATATCAACTCTGGGAAATCCAGCAAAGATCTGGGATTGTTTGGGAACAAGCTTGTGGTGGCTCTAATGGTGCAACTTAGAGATCACTTGCGAGACCATGAACCAGTTGGTGGCCCAATGATGTGCGTAATGGAGGCCGAGAGGCTTTTTATCAACACAGCTCGTGACACGGCCAGTGAAACGAGCAATGTCAACAATGGGAGCGAACCATTGCAAGCACAAGAAGACAGTCATGAAACTAACAAGAGCCAGGAGAAAGCAGATGAAGGACACTTCATTCGTGCATTTAAAATCTCTGCTATTCATCTTTTGGGTGTAAACTCTGTGCCTAATAAGATGCAATTCTGGGGAACCACGACGCAGCAGCAATCGGGATCCCGTTGGTTGCTTTCGAGTGGAATGGGTAGAAACTTCAAGCTCCCATTATCCAAGTCAAAAGCAATCGTTCGATATTCGTCACTTGGTACCAAAGCTCCGACTGGCGACATCTTGTGGAGCATTTCCTCTGATATGCAGAACGATGGAATGATTTCTGCTACATCCGCTTTGAGTTCACATAAAAGGAACCCTGATGTCGTGATCCCGAACCAAAGTATTAATCTACATATACGTTGTAGTTGA 5442 43.75 MEEMSPAVVVPFRLGNSVCDNPNMATPMDITRLKLMADTAGLLSDSVTKASDDLTEVGSDDCKSSNGEEEVGITTVSGMNDKCEGVPLSVVLSQNNSSWVPADESISHGSEEDDSLSLEGDHIYDSSCSHSVISENSSICGDDFLGSEVSSFEAFDSISNQKDISSVEIAAKANIEETNVESLDSQIASSSSAAASLEEDVGDGLGTEACNNTVLQLPLEKKASEPVSRSVFEVDCVPLWGFTSVCGRRPEMEDAVATVPRFSELPVQMLVGDRVLDGSNKAIAHQTVHFFGVYDGHGGSQVANFCRERMHLALSEEIELAKQEIAVGNVKDNCQELWRKAFTNCFLKVDAEIGGGPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLVLASDGLWDVMTNEEVCDLARRRILLWHKKNGVSLPSERGVGIDPAAQAAAEYLSNRALQKGSKDNITARGQEATSLAEKFPRTASSFRPLLLRRRPFDGVVISQSMGIKRESKSSASATSPCADFRAAYHNCFNRWYSEKFVKGHWDEEPCVSEWQKYRACLSEHLDDKKLKRFLVDGKQTVYFLFCRGEAAQIIEFCGSTVLPGTLLFVESGNGDGLGESDGGRLLEEIEAISKALYLHKGHTNSIVYPPDGRPGSHLAESKSRFNQGYHKDGESLVDETERRSSSAWNWKKSLKALTHIGHRKFNCVFYLKVHSIEGVPPSFNGYSLSVHWKRKDEVLQTRPSKVFQGMAEFDETLIHKCVIYGGRSLANHSAKYDPKLYLIYVSMLGAPGLDFGKHWVDLTRILPLTLEELEGDKCSGNWSTSFRLAGNARGASLNVSFSFLVTKDDPMKLSGPENVVQLLKLLHHKSRICNYDAHPTSTNLKGPPSPDGNISHSLEYESITSTQIFDELNPKLELSKSINLLYSKMDEADQHKSEHSGSELDEQLELKSNEENKSDEVTGGGSYDSGEFSVIECGIELAGTEDSLDKVSVPTIEGSKVETVSLDEIIEDDKVAIEMKSSVMLKDAVCVVHVDDTAEDDLEYEENNLKLKVEEVASDELSSDSDLKWTSHSVETDSPLAVGKLVDHENDMDAKENCARTSLSPDDSYESVASDFLKMLGLEHGSARFSDPDILSPRERLLREFEEESLIFGNPLLDFTATEEWQDFGSVDMEFASENQDEDFDFSSIYVAEEVQEEGHHQSLRNRRNAKILEDLETEHLMREFGLNERDFEHSPHYSSSGFGSPIELPLEEEPSKLSSLGEGFGAFLKMYGGGFLRSMSPWLSQNTSIGQSLVIQCSEPVVLPAEMGHDIMEIAQNLALAGTENLSTLAKKLMPLDDITGKTLQQMVSECPPSKILLEREPMIENNVLCSSVSFCERKDLEGLPSHQNNTSLQSLLNSEMDQDLVSPDDLAFLAIEKIETLLIEGLRIQSGLTNDEMPAQITARPFHRVPACRRRRSNLGGSFSSEGLKELQFIDRPDTASDVVGLMDLSITLEHWLRLDAGNINDDDENGQHIMKTLVAHGANYADIIERLSKDINSGKSSKDLGLFGNKLVVALMVQLRDHLRDHEPVGGPMMCVMEAERLFINTARDTASETSNVNNGSEPLQAQEDSHETNKSQEKADEGHFIRAFKISAIHLLGVNSVPNKMQFWGTTTQQQSGSRWLLSSGMGRNFKLPLSKSKAIVRYSSLGTKAPTGDILWSISSDMQNDGMISATSALSSHKRNPDVVIPNQSINLHIRCS 1813
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20806036 20819994 - CaPI482276_08g014520.1 Cam08g1452 133503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1452 1813 Gene3D - 226 539 IPR036457 -
Cam08g1452 1813 SMART PP2C_4 229 541 IPR001932 -
Cam08g1452 1813 Pfam Uncharacterised protein family (UPF0203) 587 646 IPR007918 -
Cam08g1452 1813 Pfam PMI1/PMIR1-2, C-terminal domain 1364 1514 IPR048972 -
Cam08g1452 1813 FunFam Protein phosphatase 2C 16 227 539 - -
Cam08g1452 1813 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169(InterPro)
Cam08g1452 1813 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 683 1803 IPR039614 -
Cam08g1452 1813 Pfam Protein phosphatase 2C 263 536 IPR001932 -
Cam08g1452 1813 SUPERFAMILY PP2C-like 234 538 IPR036457 -
Cam08g1452 1813 MobiDBLite consensus disorder prediction 1004 1029 - -
Cam08g1452 1813 MobiDBLite consensus disorder prediction 1664 1694 - -
Cam08g1452 1813 MobiDBLite consensus disorder prediction 1004 1039 - -
Cam08g1452 1813 CDD PP2Cc 241 538 IPR001932 -
Cam08g1452 1813 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 589 639 - -
Cam08g1452 1813 ProSiteProfiles C2 NT-type domain profile. 768 916 IPR019448 -
Cam08g1452 1813 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Cam08g1452 1813 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 773 921 IPR019448 -
Cam08g1452 1813 MobiDBLite consensus disorder prediction 1664 1681 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1602 Cam-Chr3:31022561 Cam08g1452 Cam-Chr8:20806036 8.10E-173 dispersed
Cam07g0047 Cam-Chr7:1604516 Cam08g1452 Cam-Chr8:20806036 3.40E-18 dispersed
Cam07g1177 Cam-Chr7:26154272 Cam08g1452 Cam-Chr8:20806036 2.00E-144 dispersed
Cam08g1452 Cam-Chr8:20806036 Cam11g0696 Cam-Chr11:8570213 2.00E-47 dispersed
Cam08g1452 Cam-Chr8:20806036 Cam03g0118 Cam-Chr3:2108061 3.10E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1452 - - - 0.0