Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam08g1452 | ATGGAGGAAATGTCCCCGGCGGTTGTGGTGCCATTTAGGTTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAACTCCCATGGATATCACAAGACTTAAGCTAATGGCAGATACTGCTGGTTTGTTATCTGATTCTGTGACTAAGGCTTCTGATGACCTGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTGGTATCACTACAGTTTCGGGTATGAATGACAAGTGTGAAGGAGTTCCATTGTCAGTTGTGTTATCTCAAAATAATAGCAGTTGGGTTCCGGCAGATGAGTCAATATCCCATGGAAGTGAGGAAGATGATTCTTTATCTCTAGAGGGCGATCACATTTATGATAGCTCTTGTTCACATTCAGTGATTAGTGAGAATAGCAGCATTTGTGGTGATGATTTTTTAGGTTCTGAGGTGTCTTCTTTTGAAGCATTTGATTCCATCAGCAATCAAAAGGACATTAGCAGCGTTGAGATTGCAGCTAAAGCCAATATTGAAGAGACTAATGTTGAAAGTCTTGACTCTCAGATTGCGAGTTCTTCTTCTGCAGCAGCTAGCCTTGAAGAAGATGTTGGAGATGGGCTAGGCACTGAAGCATGTAATAACACGGTTCTTCAGCTGCCTCTTGAGAAAAAGGCAAGCGAACCAGTCAGTCGAAGTGTTTTTGAGGTAGATTGTGTTCCCCTTTGGGGATTTACATCGGTTTGTGGAAGAAGACCCGAGATGGAAGATGCAGTGGCAACTGTACCTAGGTTTTCAGAACTTCCTGTCCAAATGCTTGTTGGTGACCGAGTTCTTGATGGCTCAAACAAGGCTATAGCTCACCAAACCGTTCATTTTTTTGGGGTTTATGATGGTCATGGTGGCTCTCAGGTTGCAAATTTTTGTCGTGAACGTATGCATTTGGCTTTATCTGAGGAGATAGAACTTGCTAAGCAAGAAATAGCCGTTGGCAATGTTAAGGATAATTGCCAAGAGCTATGGAGAAAGGCATTCACCAACTGTTTTCTTAAAGTTGATGCTGAAATTGGAGGGGGACCTGGTGTTGAGCCTGTTGCGCCAGAAACTGTAGGCTCCACTGCTGTTGTTGCAATTATCTGTGCCTCTCACATTATTGTTGCAAACTGTGGAGACTCAAGAGCAGTTCTTTGTCGTGGGAAAGAGCCAATGGCATTGTCTGTGGATCATAAACCAAACAGAGAAGACGAATATGAAAGGATTGAGGCTGCAGGAGGAAAGGTCATACAGTGGAACGGGCATCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATTGGTGATAGATACTTGAAACCATGGATCATCCCAGAGCCAGAAGTGATGTTCCTCCCTCGGGCAAAAGACGACGAATGCCTCGTTCTAGCGAGTGATGGTTTATGGGATGTGATGACCAATGAAGAGGTATGCGACCTGGCTCGAAGACGAATCCTACTTTGGCACAAGAAGAATGGCGTTAGTTTGCCTTCTGAGAGGGGGGTGGGGATCGATCCCGCAGCACAAGCAGCCGCAGAATACCTCTCAAACCGAGCTCTTCAAAAGGGCAGCAAAGACAACATTACGGCGCGAGGACAAGAAGCGACTTCGTTGGCCGAGAAATTTCCAAGAACCGCCTCGTCGTTCAGGCCGCTGTTGCTTCGCCGACGGCCATTTGATGGAGTGGTAATATCTCAATCAATGGGAATCAAGAGAGAGAGTAAAAGCTCCGCTTCTGCAACATCGCCGTGTGCTGATTTCAGGGCTGCATATCACAATTGTTTCAATCGATGGTACTCGGAGAAGTTTGTAAAAGGTCATTGGGATGAAGAACCCTGCGTCTCCGAGTGGCAGAAGTACAGAGCTTGCCTCTCTGAGCATTTGGATGATAAGAAGTTAAAGCGCTTCCTTGTTGATGGGAAGCAAACGGTTTACTTTCTGTTTTGTCGTGGTGAAGCTGCCCAAATTATTGAATTTTGTGGCTCAACAGTGTTACCGGGAACCCTTTTATTTGTTGAGTCTGGGAATGGTGATGGCTTAGGGGAGTCTGATGGGGGACGGTTGCTTGAGGAAATTGAGGCAATAAGTAAAGCTCTGTACTTGCACAAGGGCCACACAAACTCAATTGTTTATCCCCCTGATGGACGGCCAGGATCCCACTTGGCTGAATCAAAATCAAGATTCAACCAGGGATATCATAAGGATGGGGAATCATTGGTGGATGAAACTGAAAGAAGGTCATCATCTGCATGGAACTGGAAGAAATCTTTGAAAGCTCTTACTCATATTGGGCACCGCAAGTTCAACTGTGTATTCTATCTCAAGGTTCATTCCATAGAAGGCGTGCCTCCAAGTTTCAATGGTTATAGTTTAAGTGTACATTGGAAAAGGAAGGATGAGGTTTTGCAAACTCGTCCATCGAAGGTTTTCCAAGGCATGGCTGAATTTGATGAGACCTTGATCCACAAATGTGTGATATATGGTGGGAGAAGTTTGGCTAATCACTCGGCGAAATATGACCCTAAGCTTTACTTGATCTATGTTTCTATGCTTGGAGCACCAGGGCTTGATTTTGGGAAGCATTGGGTTGACCTCACAAGGATTTTACCTCTTACCTTGGAGGAGCTTGAGGGGGATAAATGTTCTGGGAATTGGTCGACCAGCTTTCGACTTGCAGGCAATGCAAGAGGTGCTAGCCTAAACGTCAGTTTCAGTTTTTTAGTAACCAAGGACGATCCGATGAAATTGAGCGGTCCTGAAAATGTTGTCCAACTCCTGAAGTTATTGCACCATAAGTCAAGGATTTGTAACTATGATGCACATCCTACTTCAACCAATTTAAAAGGGCCTCCAAGTCCAGATGGAAATATTTCGCATAGTCTAGAATATGAATCTATTACCTCTACTCAGATTTTTGACGAACTAAATCCAAAATTGGAGCTCTCCAAATCGATTAACCTTTTGTATAGTAAGATGGATGAGGCAGATCAGCATAAGTCAGAGCATTCAGGTTCTGAATTGGATGAGCAGCTCGAATTAAAATCTAATGAGGAAAACAAGTCTGATGAAGTAACTGGTGGAGGTAGTTATGACTCTGGTGAGTTTTCCGTTATTGAATGTGGGATTGAATTAGCTGGGACAGAAGATAGCTTGGATAAAGTTTCTGTTCCGACTATTGAGGGCTCCAAAGTAGAAACTGTTTCTTTGGATGAGATCATAGAAGACGACAAAGTTGCCATCGAGATGAAGTCAAGCGTCATGTTGAAGGATGCAGTTTGCGTTGTTCATGTAGATGACACCGCAGAGGACGACCTCGAATATGAAGAGAATAACCTAAAACTAAAAGTGGAAGAAGTTGCTTCAGATGAGTTGAGTTCAGATTCTGATCTCAAGTGGACATCACATTCGGTGGAGACTGATTCTCCATTAGCTGTTGGCAAGCTTGTCGATCATGAAAACGATATGGATGCCAAGGAGAATTGTGCTAGAACATCTCTTAGCCCAGATGACTCTTATGAATCCGTGGCCAGTGATTTTCTAAAGATGCTGGGGTTGGAGCATGGTTCTGCGAGGTTTTCAGATCCTGATATATTGTCTCCTAGAGAGCGCTTATTGAGAGAATTTGAGGAGGAATCCCTAATTTTTGGTAATCCATTATTGGATTTTACAGCTACAGAAGAGTGGCAGGATTTTGGAAGTGTTGACATGGAGTTTGCTTCTGAAAATCAAGATGAGGATTTTGATTTTTCTTCCATTTATGTTGCTGAAGAAGTACAAGAGGAGGGGCATCATCAGTCCTTGAGAAATAGAAGGAACGCCAAAATTCTTGAAGACTTGGAGACGGAACATTTAATGAGAGAATTTGGCTTAAACGAGAGAGATTTTGAGCACTCTCCACATTATAGTTCAAGTGGATTTGGAAGTCCCATTGAGTTGCCCCTAGAAGAAGAGCCATCAAAGTTATCTTCACTTGGAGAAGGTTTTGGTGCATTTCTTAAGATGTACGGTGGCGGATTTTTGCGGTCCATGAGTCCTTGGCTCTCTCAGAACACTAGCATTGGACAGAGCTTAGTCATTCAATGTTCTGAACCAGTTGTTCTACCTGCTGAAATGGGTCATGATATTATGGAGATAGCACAGAATTTAGCATTGGCAGGAACTGAAAACCTTTCGACACTTGCTAAAAAGCTGATGCCGTTGGACGATATAACCGGGAAAACTCTCCAGCAAATGGTATCAGAGTGTCCTCCCAGCAAAATATTGCTTGAGAGGGAGCCTATGATCGAGAATAACGTGTTGTGTAGTTCGGTTTCATTCTGCGAAAGGAAAGACCTCGAAGGATTGCCATCTCATCAAAACAATACTAGTCTTCAATCTCTTCTGAATTCCGAGATGGATCAAGACCTTGTGTCACCTGATGATCTAGCATTTCTGGCAATAGAAAAGATCGAAACTCTCCTAATAGAAGGATTAAGAATACAATCTGGCTTGACAAATGATGAGATGCCAGCACAAATCACTGCCCGCCCTTTTCATCGTGTGCCAGCCTGTCGACGGAGGCGTTCCAATTTGGGCGGTTCTTTTAGCTCGGAAGGATTAAAGGAACTGCAGTTTATTGATCGCCCTGATACAGCAAGTGATGTTGTTGGGTTGATGGATCTTTCTATAACGTTGGAGCACTGGTTAAGGCTTGATGCTGGTAACATTAATGACGATGATGAAAATGGTCAGCACATTATGAAGACTCTTGTGGCCCATGGTGCTAACTATGCAGATATTATTGAAAGACTATCAAAAGATATCAACTCTGGGAAATCCAGCAAAGATCTGGGATTGTTTGGGAACAAGCTTGTGGTGGCTCTAATGGTGCAACTTAGAGATCACTTGCGAGACCATGAACCAGTTGGTGGCCCAATGATGTGCGTAATGGAGGCCGAGAGGCTTTTTATCAACACAGCTCGTGACACGGCCAGTGAAACGAGCAATGTCAACAATGGGAGCGAACCATTGCAAGCACAAGAAGACAGTCATGAAACTAACAAGAGCCAGGAGAAAGCAGATGAAGGACACTTCATTCGTGCATTTAAAATCTCTGCTATTCATCTTTTGGGTGTAAACTCTGTGCCTAATAAGATGCAATTCTGGGGAACCACGACGCAGCAGCAATCGGGATCCCGTTGGTTGCTTTCGAGTGGAATGGGTAGAAACTTCAAGCTCCCATTATCCAAGTCAAAAGCAATCGTTCGATATTCGTCACTTGGTACCAAAGCTCCGACTGGCGACATCTTGTGGAGCATTTCCTCTGATATGCAGAACGATGGAATGATTTCTGCTACATCCGCTTTGAGTTCACATAAAAGGAACCCTGATGTCGTGATCCCGAACCAAAGTATTAATCTACATATACGTTGTAGTTGA | 5442 | 43.75 | MEEMSPAVVVPFRLGNSVCDNPNMATPMDITRLKLMADTAGLLSDSVTKASDDLTEVGSDDCKSSNGEEEVGITTVSGMNDKCEGVPLSVVLSQNNSSWVPADESISHGSEEDDSLSLEGDHIYDSSCSHSVISENSSICGDDFLGSEVSSFEAFDSISNQKDISSVEIAAKANIEETNVESLDSQIASSSSAAASLEEDVGDGLGTEACNNTVLQLPLEKKASEPVSRSVFEVDCVPLWGFTSVCGRRPEMEDAVATVPRFSELPVQMLVGDRVLDGSNKAIAHQTVHFFGVYDGHGGSQVANFCRERMHLALSEEIELAKQEIAVGNVKDNCQELWRKAFTNCFLKVDAEIGGGPGVEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLVLASDGLWDVMTNEEVCDLARRRILLWHKKNGVSLPSERGVGIDPAAQAAAEYLSNRALQKGSKDNITARGQEATSLAEKFPRTASSFRPLLLRRRPFDGVVISQSMGIKRESKSSASATSPCADFRAAYHNCFNRWYSEKFVKGHWDEEPCVSEWQKYRACLSEHLDDKKLKRFLVDGKQTVYFLFCRGEAAQIIEFCGSTVLPGTLLFVESGNGDGLGESDGGRLLEEIEAISKALYLHKGHTNSIVYPPDGRPGSHLAESKSRFNQGYHKDGESLVDETERRSSSAWNWKKSLKALTHIGHRKFNCVFYLKVHSIEGVPPSFNGYSLSVHWKRKDEVLQTRPSKVFQGMAEFDETLIHKCVIYGGRSLANHSAKYDPKLYLIYVSMLGAPGLDFGKHWVDLTRILPLTLEELEGDKCSGNWSTSFRLAGNARGASLNVSFSFLVTKDDPMKLSGPENVVQLLKLLHHKSRICNYDAHPTSTNLKGPPSPDGNISHSLEYESITSTQIFDELNPKLELSKSINLLYSKMDEADQHKSEHSGSELDEQLELKSNEENKSDEVTGGGSYDSGEFSVIECGIELAGTEDSLDKVSVPTIEGSKVETVSLDEIIEDDKVAIEMKSSVMLKDAVCVVHVDDTAEDDLEYEENNLKLKVEEVASDELSSDSDLKWTSHSVETDSPLAVGKLVDHENDMDAKENCARTSLSPDDSYESVASDFLKMLGLEHGSARFSDPDILSPRERLLREFEEESLIFGNPLLDFTATEEWQDFGSVDMEFASENQDEDFDFSSIYVAEEVQEEGHHQSLRNRRNAKILEDLETEHLMREFGLNERDFEHSPHYSSSGFGSPIELPLEEEPSKLSSLGEGFGAFLKMYGGGFLRSMSPWLSQNTSIGQSLVIQCSEPVVLPAEMGHDIMEIAQNLALAGTENLSTLAKKLMPLDDITGKTLQQMVSECPPSKILLEREPMIENNVLCSSVSFCERKDLEGLPSHQNNTSLQSLLNSEMDQDLVSPDDLAFLAIEKIETLLIEGLRIQSGLTNDEMPAQITARPFHRVPACRRRRSNLGGSFSSEGLKELQFIDRPDTASDVVGLMDLSITLEHWLRLDAGNINDDDENGQHIMKTLVAHGANYADIIERLSKDINSGKSSKDLGLFGNKLVVALMVQLRDHLRDHEPVGGPMMCVMEAERLFINTARDTASETSNVNNGSEPLQAQEDSHETNKSQEKADEGHFIRAFKISAIHLLGVNSVPNKMQFWGTTTQQQSGSRWLLSSGMGRNFKLPLSKSKAIVRYSSLGTKAPTGDILWSISSDMQNDGMISATSALSSHKRNPDVVIPNQSINLHIRCS | 1813 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 20806036 | 20819994 | - | CaPI482276_08g014520.1 | Cam08g1452 | 133503 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam08g1452 | 1813 | Gene3D | - | 226 | 539 | IPR036457 | - | |
Cam08g1452 | 1813 | SMART | PP2C_4 | 229 | 541 | IPR001932 | - | |
Cam08g1452 | 1813 | Pfam | Uncharacterised protein family (UPF0203) | 587 | 646 | IPR007918 | - | |
Cam08g1452 | 1813 | Pfam | PMI1/PMIR1-2, C-terminal domain | 1364 | 1514 | IPR048972 | - | |
Cam08g1452 | 1813 | FunFam | Protein phosphatase 2C 16 | 227 | 539 | - | - | |
Cam08g1452 | 1813 | ProSitePatterns | PPM-type phosphatase domain signature. | 290 | 298 | IPR000222 | GO:0043169(InterPro) | |
Cam08g1452 | 1813 | PANTHER | PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 | 683 | 1803 | IPR039614 | - | |
Cam08g1452 | 1813 | Pfam | Protein phosphatase 2C | 263 | 536 | IPR001932 | - | |
Cam08g1452 | 1813 | SUPERFAMILY | PP2C-like | 234 | 538 | IPR036457 | - | |
Cam08g1452 | 1813 | MobiDBLite | consensus disorder prediction | 1004 | 1029 | - | - | |
Cam08g1452 | 1813 | MobiDBLite | consensus disorder prediction | 1664 | 1694 | - | - | |
Cam08g1452 | 1813 | MobiDBLite | consensus disorder prediction | 1004 | 1039 | - | - | |
Cam08g1452 | 1813 | CDD | PP2Cc | 241 | 538 | IPR001932 | - | |
Cam08g1452 | 1813 | ProSiteProfiles | Coiled coil-helix-coiled coil-helix (CHCH) domain profile. | 589 | 639 | - | - | |
Cam08g1452 | 1813 | ProSiteProfiles | C2 NT-type domain profile. | 768 | 916 | IPR019448 | - | |
Cam08g1452 | 1813 | ProSiteProfiles | PPM-type phosphatase domain profile. | 239 | 543 | IPR001932 | - | |
Cam08g1452 | 1813 | Pfam | N-terminal C2 in EEIG1 and EHBP1 proteins | 773 | 921 | IPR019448 | - | |
Cam08g1452 | 1813 | MobiDBLite | consensus disorder prediction | 1664 | 1681 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam03g1602 | Cam-Chr3:31022561 | Cam08g1452 | Cam-Chr8:20806036 | 8.10E-173 | dispersed | |
Cam07g0047 | Cam-Chr7:1604516 | Cam08g1452 | Cam-Chr8:20806036 | 3.40E-18 | dispersed | |
Cam07g1177 | Cam-Chr7:26154272 | Cam08g1452 | Cam-Chr8:20806036 | 2.00E-144 | dispersed | |
Cam08g1452 | Cam-Chr8:20806036 | Cam11g0696 | Cam-Chr11:8570213 | 2.00E-47 | dispersed | |
Cam08g1452 | Cam-Chr8:20806036 | Cam03g0118 | Cam-Chr3:2108061 | 3.10E-64 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam08g1452 | - | - | - | 0.0 |