Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1470 ATGGACGACGGAGCAGCTTCTCAGCCGGACGACACCGTCATGTCGGAGGCGGCGTCTGTACCACCACCGCAGCACGACCCGGCGGCGCACCAGCAGCATCAGCATCAGCCGCCGTCGATGGGGATGGAAAATATTCCGGCGACTTTGAGCCATGGAGGGAGATTTATTCAGTATAATATCTTTGGTAACATCTTCGAAGTTACGGCCAAGTACAAGCCTCCCATCATGCCTATTGGCAAAGGCGCTTACGGCATCGTCTGTTCTGCTCTCAACTCCGAGACCAACGAGCATGTGGCGATCAAGAAGATTGCTAATGCGTTTGATAACAAGATCGATGCTAAGAGAACTCTTCGTGAGATCAAGCTTCTTCGGCATATGGATCATGAAAACGTTGTTGCAATTAGGGATATCATACCTCCACCTCTTAGGGAAACATTCAATGATGTTTATATAGCATATGAGCTAATGGATACCGACCTTCATCAAATAATTCGTTCAAACCAAGCATTATCAGAGGAGCATTGTCAGTATTTCCTGTACCAGATTCTCCGTGGATTGAAGTACATACATTCAGCTAATGTTCTGCACAGAGATTTGAAGCCTTCCAATCTGCTATTAAATGCCAACTGTGACCTGAAAATATGTGATTTCGGACTTGCTCGTGTTACTTCTGAAACTGACTTTATGACAGAATATGTGGTTACAAGATGGTACCGTGCACCAGAGCTCTTACTTAATTCATCTGATTACACAGCAGCTATTGATGTCTGGTCTGTTGGTTGTATTTTTATGGAACTGATGGATCGGAAGCCATTGTTTCCTGGTAGAGATCATGTGCATCAGTTGCGCTTGCTTTTGGAGCTGATTGGCACCCCATCAGAGGCTGATCTTGGTTTTTTGAACGAGAATGCTAAAAGATACATACGGCAACTACCTCATTACCATCGTCAGTCATTCACTGAAAAGTTTCCACATGTCCATCCTGCAGCCATTGATCTGGTGGAGAAGATGCTAACATTTGATCCAGGACAGAGAATTACCGTTGAAGATGCTCTTGCTCATCCTTATTTGACTTCATTGCATGACATTAGTGATGAGCCTGTCTGCATGACACCCTTCAGCTTTGATTTCGAGCAGCATGCGCTTACCGAGGAACAGATGAAAGAGCTGATCTATCTAGAGGCGCTTGCATTTAACCCTGAGTGCCTTCATTCAAGGCTTGATTCTATAATTCTATTTTCCTCACATCAGGAGCAAATAACTTTTGGGCCAATCAGCTGGATTTTGAAGACAGAGGCCTTCTTAAAACCCACTGCCACTGTTGCAACTGCGTCCGTCGAGGCAAGTCTCTTCTACTGA 1359 45.11 MDDGAASQPDDTVMSEAASVPPPQHDPAAHQQHQHQPPSMGMENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPLRETFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLLELIGTPSEADLGFLNENAKRYIRQLPHYHRQSFTEKFPHVHPAAIDLVEKMLTFDPGQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYLEALAFNPECLHSRLDSIILFSSHQEQITFGPISWILKTEAFLKPTATVATASVEASLFY 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 20954724 20962788 + CaPI482276_08g014700.1 Cam08g1470 133521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1470 452 FunFam Mitogen-activated protein kinase 57 166 - -
Cam08g1470 452 MobiDBLite consensus disorder prediction 1 44 - -
Cam08g1470 452 Pfam Protein kinase domain 77 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1470 452 SMART serkin_6 72 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1470 452 FunFam Mitogen-activated protein kinase 156 384 - -
Cam08g1470 452 Gene3D Transferase(Phosphotransferase) domain 1 156 384 - -
Cam08g1470 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam08g1470 452 ProSitePatterns Protein kinases ATP-binding region signature. 78 102 IPR017441 GO:0005524(InterPro)
Cam08g1470 452 Gene3D Phosphorylase Kinase; domain 1 55 393 - -
Cam08g1470 452 ProSitePatterns MAP kinase signature. 107 210 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1470 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 65 393 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam08g1470 452 CDD STKc_TEY_MAPK 65 400 - -
Cam08g1470 452 SUPERFAMILY Protein kinase-like (PK-like) 77 365 IPR011009 -
Cam08g1470 452 ProSiteProfiles Protein kinase domain profile. 72 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1470 452 MobiDBLite consensus disorder prediction 29 43 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0204 Cam-Chr3:3016901 Cam08g1470 Cam-Chr8:20954724 6.60E-171 dispersed
Cam06g0350 Cam-Chr6:5607397 Cam08g1470 Cam-Chr8:20954724 2.30E-160 dispersed
Cam08g1470 Cam-Chr8:20954724 Cam08g1951 Cam-Chr8:25414855 5.80E-113 dispersed
Cam04g1236 Cam-Chr4:26386648 Cam08g1470 Cam-Chr8:20954724 2.60E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85380 PF00069 Pkinase 4.70E-73 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1470 K14512 - csv:101204301 791.956