Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1498 ATGCCGAGTATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATATGATTTGACTTCATATTTGGATGAGCATCCCGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGACGCCAGAGAGTTGATGGAGAAGTTCTATATCGGCGTGCTTGATACATCTCCCTCGGATGGCCTAGAACTTGAAACGAAACAAGTAGACGGTTATGCAGCTCGGTTTCAGGCCTTGACAAAGCAATACTGGAAGGCTCCTGTTGCAGTACTTGGTATTTCTGTGGTAGTTGGCTGTCTATACTTGCGCAAGAAGTGA 396 45.96 MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSPSDGLELETKQVDGYAARFQALTKQYWKAPVAVLGISVVVGCLYLRKK 131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21197386 21199219 + CaPI482276_08g014980.1 Cam08g1498 133549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1498 131 SMART Cyt_b5_2 8 81 IPR001199 -
Cam08g1498 131 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cam08g1498 131 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cam08g1498 131 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cam08g1498 131 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cam08g1498 131 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cam08g1498 131 Gene3D - 3 85 IPR036400 -
Cam08g1498 131 FunFam Cytochrome b5 type B 3 85 - -
Cam08g1498 131 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 81 IPR001199 -
Cam08g1498 131 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 84 IPR036400 -
Cam08g1498 131 PANTHER CYTOCHROME B5 6 129 IPR050668 GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cam08g1498 131 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g0799 Cam-Chr6:10986942 Cam08g1498 Cam-Chr8:21197386 3.00E-25 dispersed
Cam07g0188 Cam-Chr7:3080137 Cam08g1498 Cam-Chr8:21197386 3.70E-23 dispersed
Cam08g1498 Cam-Chr8:21197386 Cam11g0220 Cam-Chr11:3728512 6.20E-15 dispersed
Cam08g1498 Cam-Chr8:21197386 Cam05g0384 Cam-Chr5:3533029 1.20E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1498 K23490 - csv:101220127 241.506