Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam08g1498 | ATGCCGAGTATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGACGACTGTTGGATCATTATCGATGGCAAGGTATATGATTTGACTTCATATTTGGATGAGCATCCCGGTGGAGATGATGTTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTTGAAGATGCTGGTCATAGCAAAGACGCCAGAGAGTTGATGGAGAAGTTCTATATCGGCGTGCTTGATACATCTCCCTCGGATGGCCTAGAACTTGAAACGAAACAAGTAGACGGTTATGCAGCTCGGTTTCAGGCCTTGACAAAGCAATACTGGAAGGCTCCTGTTGCAGTACTTGGTATTTCTGTGGTAGTTGGCTGTCTATACTTGCGCAAGAAGTGA | 396 | 45.96 | MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDVIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSPSDGLELETKQVDGYAARFQALTKQYWKAPVAVLGISVVVGCLYLRKK | 131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21197386 | 21199219 | + | CaPI482276_08g014980.1 | Cam08g1498 | 133549 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam08g1498 | 131 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
Cam08g1498 | 131 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
Cam08g1498 | 131 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
Cam08g1498 | 131 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
Cam08g1498 | 131 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
Cam08g1498 | 131 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
Cam08g1498 | 131 | Gene3D | - | 3 | 85 | IPR036400 | - | |
Cam08g1498 | 131 | FunFam | Cytochrome b5 type B | 3 | 85 | - | - | |
Cam08g1498 | 131 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 11 | 81 | IPR001199 | - | |
Cam08g1498 | 131 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 5 | 84 | IPR036400 | - | |
Cam08g1498 | 131 | PANTHER | CYTOCHROME B5 | 6 | 129 | IPR050668 | GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Cam08g1498 | 131 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam06g0799 | Cam-Chr6:10986942 | Cam08g1498 | Cam-Chr8:21197386 | 3.00E-25 | dispersed | |
Cam07g0188 | Cam-Chr7:3080137 | Cam08g1498 | Cam-Chr8:21197386 | 3.70E-23 | dispersed | |
Cam08g1498 | Cam-Chr8:21197386 | Cam11g0220 | Cam-Chr11:3728512 | 6.20E-15 | dispersed | |
Cam08g1498 | Cam-Chr8:21197386 | Cam05g0384 | Cam-Chr5:3533029 | 1.20E-26 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam08g1498 | K23490 | - | csv:101220127 | 241.506 |