Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1563 ATGGAGAAGGAGAGAGAGCACCTTGTTTACTTGGCTAGACTTGCAGAACAAGCTGAGAGATATGATGAAATGGTGGAAATGATGAAGAGCGTTGCAAAGTTGGATGTAGAACTTACTGTGGAGGAGAGGAACCTGGTCTCTGTGGGATATAAGAATGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTTTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAACGAGGTTAATGTGAAGAGGGTAAAGGAGTACAGGCAGAGGGTTGAAGACGAACTGGCGAGAATTTGCCAGGACATCTTAACTGTTGTTGACAAGCATCTCATTCCATCTTCATCCTCTGGAGAATCCAATGTTTTTTACTATAAGATGAAGGGGGATTATAACCGATACTTAGCGGAGTTTAAATCTGGCCGTGAACGTGAAGAAGCTGCAGACCAGTCAATGAAGGCCTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTGCCTCCAACACACCCCATCAGACTTGGCTTGGCGCTTAACTTTTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCGTGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGATGGCCTCAATGAAGAATCCTACAAGGACAGTACCCTCATTATGCAGCTGCTGAGGGATAATCTAACGTTATGGACCTCAGATCTCCCAGATGAGGGAGGTGAGCAATCTAAAGCTGCTGATGAACCTTGA 753 44.62 MEKEREHLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILTVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGREREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSKAADEP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21859106 21861412 - CaPI482276_08g015630.1 Cam08g1563 133614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1563 250 Gene3D - 1 246 IPR036815 -
Cam08g1563 250 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Cam08g1563 250 PIRSF 14-3-3 1 247 IPR000308 -
Cam08g1563 250 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cam08g1563 250 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cam08g1563 250 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cam08g1563 250 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cam08g1563 250 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cam08g1563 250 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cam08g1563 250 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cam08g1563 250 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cam08g1563 250 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cam08g1563 250 Pfam 14-3-3 protein 11 233 IPR023410 -
Cam08g1563 250 FunFam 14-3-3 protein epsilon 1 246 - -
Cam08g1563 250 SMART 1433_4 5 246 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2560 Cam-Chr5:33373266 Cam08g1563 Cam-Chr8:21859106 1.50E-108 dispersed
Cam08g1491 Cam-Chr8:21149472 Cam08g1563 Cam-Chr8:21859106 2.40E-106 dispersed
Cam08g1563 Cam-Chr8:21859106 Cam08g1580 Cam-Chr8:21977294 4.50E-91 dispersed
Cam07g0278 Cam-Chr7:3862978 Cam08g1563 Cam-Chr8:21859106 5.40E-111 transposed
Cam11g1440 Cam-Chr11:27102452 Cam08g1563 Cam-Chr8:21859106 1.50E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1563 K06630 - csv:101222677 464.922