Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1624 ATGCTCAATTCAACAATGGTTCATCCTGGTTCTACCCAATTTTCACATAAATTGGGGATTCAAAGTGTTCATGGATGCAATAAGTTACATATTAGTATCAAGGGAAAGACTCGTGTACATCTTGTTACTATCGTTCCTTCATCACATGGTCTGAGGCATGATCCTGTAAGTCTTCAGCTCTTACGGAGTGTAAGTCGACCAATGTATCCTGTGTCTTCCAGAGCAAATGTTTTTGTGTGTCGATCTGTTCTGGAATCAGGTGGTGGAGCTGGGACTGCCGTTCTAAACTCTGCAGCTGTAGTTTTGACAAGATCTTATGATGCTTTACGAGGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTGTTGGACCTCTTATGCGTTTGGGGAGGATACTATTTCTTCATGAGCCGGATGGCAGTTGGAAGAAAAGTAGTACATACTATGTTACGACTTCTTATGTTCAGCCTTTACTGCTATGGACTGGAGCTACACTGATCTGCAGGGCATTGGATCCAGTAGTTTTACCTTCAGTAGCCAGTCAGGCTGTCAAACAACGACTTCTGAATTTTGTTAGATCTTTGTCTACTGTTCTCGCATTTGCCTATTGTATATCCAGCTTGATTCAACAAGTACAAAAATTCGCTTCTGAATCAAATGACTCAAGTGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCCCTTTCATTGTTCATGGAGTTGCTCGGTTTTTCTACCCAGAAGTGGCTAACAGCTGGGGGTCTTGGAACCGTATTACTTACCCTTGCTGGTCGTGAGATATTTACTAACTTCCTTTCAAGTGTAATGATTCATGCAACACGACCATTTGTCGTAAATGAATGGATTCAAACAAAGATTGATGGATATGAAGTCTCAGGAACGGTTGAGCATGTTGGTTGGTGGTCGCCAACCATCATCCGAGGCGATGATCGTGAAGCAGTCCATATTCCAAATCACAAATTCACGGTTAGTATTGTGAGGAATCTTACCCAAAAGACTCATTGGCGTATCAAAACTCATCTTGCCATCAGCCACTTAGATGTTAATAAGATCAATTATATTGTAGCTGATATGCGCAAAGTTCTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGCAGAATTTTTTTGGATAACGTCAATCCTGAAAACCAGGCTCTTATGATCATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTATGTGTCAAGGAGGCAATTCTCTTGGATCTCCTCAGGGTTATCAGCCACCATAGGGCCCGCCTCGCCACTCCCATTCGCACTGTTCAGAAAATATATGGCGAAGCTGATTTGGAGAATGTACCATTTTCCGAGACCATGTATTCTCGTTCCAACCGTCCTCTGCTTCTTATTGAGCCATCTTATAAAGTCAATGGTGATGATAAAACCAAAGTCTCTAGTCGTCCCACTCGTTCATCTAACGAAGAAAAGGAAGCGAAACAAGAGGCAGTCTCAATGTCAGGGACAAAAGCCCCCGACACAGCTGGATCAACATCAAATCTAGCAAGCAATGAGATAAAAGGAGAAAAGAAAGATGTCATAGGAATGAATTCCAAGGACAATATGCCACGAGGGACTCCGCCCAAAAGATCTCCCTCAGCTTCCAGTCCTAGCAGTGAGAAAGCTGATATTCCTTCCTCAAGCTCACAGAATAAGCAAGACGGCGAGAAGACCTCTGCATCGCCATCAGTGGCGAGGGCACCATTGGAGGAGAATATTGTCCTGGGAGTTGCGTTAGAAGGCTCGAAAAGAACTCTTCCAATTGATGAAGATTTGGATTCAAAAGAAATTTCAACACAGAGGAATGGGAGTGAGTTTCCCGGCAACAGTAAGGATATGAAAGATGGCCAAATGCCTGCAGTTCCAGTTCATATTCTTATTGTTAAACTCATCTCTGGATCAGTCCGGCATTAG 2031 42.93 MLNSTMVHPGSTQFSHKLGIQSVHGCNKLHISIKGKTRVHLVTIVPSSHGLRHDPVSLQLLRSVSRPMYPVSSRANVFVCRSVLESGGGAGTAVLNSAAVVLTRSYDALRGSPLLLKLIPAACVIAFAAWGVGPLMRLGRILFLHEPDGSWKKSSTYYVTTSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVLAFAYCISSLIQQVQKFASESNDSSDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNVNPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEADLENVPFSETMYSRSNRPLLLIEPSYKVNGDDKTKVSSRPTRSSNEEKEAKQEAVSMSGTKAPDTAGSTSNLASNEIKGEKKDVIGMNSKDNMPRGTPPKRSPSASSPSSEKADIPSSSSQNKQDGEKTSASPSVARAPLEENIVLGVALEGSKRTLPIDEDLDSKEISTQRNGSEFPGNSKDMKDGQMPAVPVHILIVKLISGSVRH 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22450235 22456034 + CaPI482276_08g016240.1 Cam08g1624 133675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1624 676 Gene3D - 197 301 - -
Cam08g1624 676 MobiDBLite consensus disorder prediction 496 522 - -
Cam08g1624 676 Gene3D - 303 358 IPR023408 -
Cam08g1624 676 MobiDBLite consensus disorder prediction 526 543 - -
Cam08g1624 676 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 6 654 IPR045042 -
Cam08g1624 676 MobiDBLite consensus disorder prediction 567 599 - -
Cam08g1624 676 SUPERFAMILY Sm-like ribonucleoproteins 287 357 IPR010920 -
Cam08g1624 676 Pfam Mechanosensitive ion channel, beta-domain 287 357 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam08g1624 676 MobiDBLite consensus disorder prediction 491 656 - -
Cam08g1624 676 MobiDBLite consensus disorder prediction 623 637 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1624 Cam-Chr8:22450235 Cam10g0719 Cam-Chr10:11880751 3.00E-190 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1624 K22047 - csv:101213477 1189.48