Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1631 ATGAAAGGCGATTTTGCTCATCCCAAGAGCAAAACTTCCAATATGTTATCCAAATTCCATCTCTCAGCCCACCCCTTTTCCCACCATCCTCCGCCGCAACAACCCGCCGACGAGCCCACCGCCACCGTGCCTTCCCCCTTTAAACACCGCCCGGAGCTAACTTCCACCGCTGATGGTTCCACCATCGAGGTGGTCCGACGGCCGAGGGGTCGCCCACCGGGTTCCAAAAATAAACCCAAACCGCCTCTTGTTATAACCCGGGAACCCGAACCGGCTATGCGGCCGTACGTTCTAGAAGTGCCTGGTGGAAATGACGTCGTTGAAGCTATTTCACGATTTTGCCGTCGCAAAAATATGGGCCTTTGTGTTCTTAACGGTTCCGGTACCGTTGCTAACGTCTCTCTCCGTCAACCCTCCGCCACACCTGGCGCTACCGTTACTTTTCACGGCCGTTTTGAGATTCTCTCCATTTCCGCTACCGTCTTCCCTCAAACCACGCCGTTACCTTTGCCTAATGGTTTTACCATCTCCCTCGCCGGACCTCAGGGTCAAATCGTCGGCGGTTTGGTCGCCGGTGCTTTAATTGCCGCCGGTACCGTTTTTGTCGTTGCCTCGTCGTTCAATAATCCGCTGTACCACCGGCTTCCCGATGAGGAAGAGATTAAGAATTTGGGATCCGGTGGCGGCAGTGGCGGTGGCGAAGTTCATTCCCCACACGTCTCTGGCGGTGGAGATAGTAGCGGGCACGGGCAGGGGCAGAGTCAAGGGCACGGGCAGCTGGTGGAATCGTGTGGAATGGCTATGTATAGTTGCCACGCTCCGTCCGACGTAATATGGGCGCCGACGGCGAGACAACCGCCGCCGCCGCCGTACTAA 876 56.62 MKGDFAHPKSKTSNMLSKFHLSAHPFSHHPPPQQPADEPTATVPSPFKHRPELTSTADGSTIEVVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGLCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQTTPLPLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGHGQGQSQGHGQLVESCGMAMYSCHAPSDVIWAPTARQPPPPPY 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22524887 22525762 + CaPI482276_08g016310.1 Cam08g1631 133682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1631 291 FunFam AT-hook motif nuclear-localized protein 94 226 - -
Cam08g1631 291 ProSiteProfiles PPC domain profile profile. 90 228 IPR005175 -
Cam08g1631 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 219 - -
Cam08g1631 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 208 IPR005175 -
Cam08g1631 291 Gene3D - 93 225 - -
Cam08g1631 291 MobiDBLite consensus disorder prediction 1 86 - -
Cam08g1631 291 MobiDBLite consensus disorder prediction 222 258 - -
Cam08g1631 291 MobiDBLite consensus disorder prediction 244 258 - -
Cam08g1631 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 259 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam08g1631 291 PIRSF ESCAROLA 9 290 IPR014476 GO:0003680(InterPro)
Cam08g1631 291 CDD DUF296 94 207 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1175 Cam-Chr3:23274029 Cam08g1631 Cam-Chr8:22524887 1.20E-36 dispersed
Cam08g1631 Cam-Chr8:22524887 Cam09g1197 Cam-Chr9:13079260 1.70E-44 dispersed
Cam11g1477 Cam-Chr11:27507816 Cam08g1631 Cam-Chr8:22524887 2.90E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1631 - - - 0.0