Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1643 ATGGCCGCCGCCGTGCCGGAAAATCTCTCTCGCGAGCAATATGTGTATCTAGCGAAGCTTGCCGAGCAGGCTGAAAGATATGAGGAGATGGTTCAGTTCATGCAGAAACTTGTTCTTGGTTCAACCCCAGGCTCTGAGCTCTCTGTCGAGGAGCGAAATCTTCTCTCTGTCGCTTACAAGAACGTGATTGGCTCACTTCGAGCCGCTTGGCGGATTGTCTCTTCCATCGAGCAAAAGGAGGAGAGCCGTAAGAATGAAGAGCATGTTGTTCTTGTTAAGGATTACAGATCAAAGGTTGAGGCTGAGCTTTCCGACGTCTGTGCGAGTATTTTGCAGCTTTTGGACTCGAATCTTATTCCCTCCGCCTCTGCTAGTGAGTCTAAGGTCTTCTACTTGAAGATGAAAGGGGATTACCATAGGTATTTGGCGGAGTTTAAGGTTGGGGATGAGAGGAAAGCCGCTGCTGAGGATACTATGCTGGCTTATAGAGCTGCTCAGGATGTCGCAGTTGCAGATCTTGCACCCACTCATCCGATAAGGCTAGGGCTGGCACTCAATTTCTCTGTGTTTTACTTCGAGATTCTGAATCAGTCCGATAAAGCATGCAGCATGGCCAAGGAGGCATTTGAGGAAGCCATTGCTGAACTGGACACTTTGGGTGAAGAATCATACAAGGACAGTACCCTCATCATGCAACTATTGAGGGACAACCTCACTCTCTGGACTTCAGATGCTCAGGACCAGTTAGATGAGTCATAG 759 48.62 MAAAVPENLSREQYVYLAKLAEQAERYEEMVQFMQKLVLGSTPGSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEESRKNEEHVVLVKDYRSKVEAELSDVCASILQLLDSNLIPSASASESKVFYLKMKGDYHRYLAEFKVGDERKAAAEDTMLAYRAAQDVAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKEAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDAQDQLDES 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22633405 22636730 + CaPI482276_08g016430.1 Cam08g1643 133694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1643 252 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Cam08g1643 252 PIRSF 14-3-3 6 252 IPR000308 -
Cam08g1643 252 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cam08g1643 252 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cam08g1643 252 Gene3D - 1 252 IPR036815 -
Cam08g1643 252 SMART 1433_4 11 251 IPR023410 -
Cam08g1643 252 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cam08g1643 252 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cam08g1643 252 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cam08g1643 252 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cam08g1643 252 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cam08g1643 252 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cam08g1643 252 FunFam 14-3-3 protein epsilon 8 252 - -
Cam08g1643 252 Coils Coil 17 37 - -
Cam08g1643 252 PANTHER 14-3-3 PROTEIN 11 247 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cam08g1643 252 Pfam 14-3-3 protein 17 242 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1643 Cam-Chr8:22633405 Cam11g1448 Cam-Chr11:27210148 1.40E-100 dispersed
Cam11g1470 Cam-Chr11:27424338 Cam08g1643 Cam-Chr8:22633405 5.30E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1643 K06630 - csv:101222827 483.411