Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1714 ATGTGGAGTCAGAAGCAATCAATTGGTGGTAAGGAAAGGAAAGAGCTGGCCACTGGCAATCAATTAGTGGGAATCGCCATTGACAAGGATAAAGGAAGTCAAGTTGCTCTCAAATGGGCCACTGAGAATCTTCTTGTAAAGGGCCAAACTGCCATTCTCATCCACGTTAAACTCCGACCTTCCTCCTATCCTGGCTCTTCTCTCGCTACCCCTAAGGTGATGTCGGCATCTGATGCTGGCAGTGGCAATGGCAATGTTATGGTAAGCAAGGATATGGATCCGAGCACAAGGGATTTGTTCCTTCCTTTTCGCTGCTTCTGTACGCGTAAAGATATATTTTGCAAAGACATCGTCCTTGAAGATTTAGACGTTGCAAAAGCGTTGATCGAATATGTCACTCAGGCTGGAATTGAGAATTTGGTTGTTGGTGCCACGACTAAAAGTGGCTTCTTGAGAAGATTCAAGACGACAGATATTCCAGGCAGTGTTGTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGAGGGAAAATCCAAACAATGCGATCAGCCTCACGTCCTGCTCCCGCTTCGTCTCCTCTACGAAGTTTATTGCTGAGCCAAGCTGGTATCAAATCACATTCAGCAGAGTCACCAGTTCCTCAGATTCAAAGACCTGAAAAGCCTCCCCTTGAAGCAGCACGTAGATCTCAGGACAACATCGAGTTCAGGTCACCGTTCACTAGGAAAGGCTACAATGGAAAAATGCCAGGGGAAGTCAGTCAGCCAGATACTGATATTTCTTTTGTTAGCTCGGGAAGGCCGAGTGTTGATAGATTATTCCCTACATTGTATGACAACCTGGATACAGGAAGGGTTCCCCCACGGCTGTCCAGTGGCAACGATGCTGATATATACAATAGCTTCGAGTCACAGCAGTTCGGACGCAAATCATTGGATGTAAACTATCCACCTGAATTTTTATCGGTCTTCTCAGAAGGCGACAGATTGTCGACTTCGTCACAGAGTATGGAAGAAGTAGAGGCTGAAATGAGGAGGCTGAAGCTGGAACTAAAGCAAACCATGGAAATGTATAGCACAGCCTGCAAGGAAGCACTAACAGCTAAACAAAAGGCAATAGAGCTTCAACGATGGAAATCTGAGGAAGAGCGTAGAATAGAGGAGGCAAGACTTGCAGAGGAAGCTGCATTAGCGATGGTTGAGCAGGAAAAGGCGAAGTCTCGAGCTGCTATTGAGGCTGCTGAGGCAGCTAAAAGGATTGCTGAGTTGGAAGCACAGAAGAGAATTAACGCGGAAAAGAAAGCATTCAAGGAAGCAGAAGAGAAGAAGAAGGCATTAGATGCTTTGGCAAACAATGATGTCAGGTATCGGAAGTACTCAATTGACGAGATTGAAACTGCTACTGAGTTTTTTTCAGAATCTTTAAAGATTGGAGAGGGAGGTTATGGCCCTGTTTATAAAGGTTATTTGGACCACACACCAGTTGCAATTAAGGTCTTACGTCCGGATGCGGCTCAAGGAAGGTCACAGTTCCAGCAAGAGGTTGAAGTACTAAGCTGCATACGACATCCTAACATGGTTCTTCTCCTTGGAGCATGCCCCGAATATGGCTGCTTGGTCTATGAGTTCATGGCACATGGTAGCTTGGATGACTGCCTCTTTCGCCGAAGAGAAAACTCAAAACCTCTTTCTTGGCAACGTAGATTCAAAATTGCAGCTGAAATTGGCACTGCCTTGTTGTTCCTCCACCAGACTAAGCCTGAGCCTCTTGTGCACCGTGATTTGAAACCGGCCAACATCTTGCTTGATCGTAACTATGTTAGCAAGATTAGCGACGTTGGTTTGGCCAGGCTTGTTCCCCCATCTGTAGCCGACAGTGTGACACAATATAGAATGACTTCAACTGCTGGCACATTCTGTTATATCGATCCCGAGTATCAACAAACGGGCATGCTTGGTGTAAAGTCCGACATATATTCATTGGGAATCATGTTTTTGCAGTTGATTACAGCAAGGGCACCCATGGGATTGACTCACCATGTGGGAAGAGCTATTGAGAAAGGGACTTTGTCGGAAATTCTTGATCCATCTGTTACCGATTGGCCAGCTGAAGAAACGTTATGCTTTGCAGAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGGAAAGACCGACCTGATCTCGGTAAGGTTGTTCTCCCAGAACTCATCAGATTTCAATCGCTAGCCGAAGCCAGCATGTACACACTGGTGACGGACGGTGTTAGCAGCCCTGTGTTCAGCCACAGCCAGGTTCCTATGAGAAAAGACGGCGAATGTTTTTCCTCAAAATCTAGTGATAGAAATGGAGTCTTATCGCGCTCGGCGTCGTAG 2379 45.94 MWSQKQSIGGKERKELATGNQLVGIAIDKDKGSQVALKWATENLLVKGQTAILIHVKLRPSSYPGSSLATPKVMSASDAGSGNGNVMVSKDMDPSTRDLFLPFRCFCTRKDIFCKDIVLEDLDVAKALIEYVTQAGIENLVVGATTKSGFLRRFKTTDIPGSVVKGAPDFCNVYVISRGKIQTMRSASRPAPASSPLRSLLLSQAGIKSHSAESPVPQIQRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVSQPDTDISFVSSGRPSVDRLFPTLYDNLDTGRVPPRLSSGNDADIYNSFESQQFGRKSLDVNYPPEFLSVFSEGDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKSEEERRIEEARLAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELEAQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIDEIETATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFRRRENSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITARAPMGLTHHVGRAIEKGTLSEILDPSVTDWPAEETLCFAELALKCAELRRKDRPDLGKVVLPELIRFQSLAEASMYTLVTDGVSSPVFSHSQVPMRKDGECFSSKSSDRNGVLSRSAS 792
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23433888 23438856 + CaPI482276_08g017140.1 Cam08g1714 133765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1714 792 SMART serkin_6 474 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1714 792 CDD STK_N 22 179 - -
Cam08g1714 792 Pfam Protein kinase domain 477 729 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1714 792 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 446 546 - -
Cam08g1714 792 PANTHER OS02G0152300 PROTEIN 25 755 IPR051348 -
Cam08g1714 792 Coils Coil 333 360 - -
Cam08g1714 792 Gene3D HUPs 21 176 IPR014729 -
Cam08g1714 792 SUPERFAMILY Protein kinase-like (PK-like) 458 734 IPR011009 -
Cam08g1714 792 Coils Coil 400 455 - -
Cam08g1714 792 Gene3D Transferase(Phosphotransferase) domain 1 547 749 - -
Cam08g1714 792 Gene3D Phosphorylase Kinase; domain 1 452 546 - -
Cam08g1714 792 MobiDBLite consensus disorder prediction 773 792 - -
Cam08g1714 792 ProSiteProfiles Protein kinase domain profile. 474 739 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g1714 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 172 - -
Cam08g1714 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 593 605 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam08g1714 792 MobiDBLite consensus disorder prediction 209 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2835 Cam-Chr5:35422930 Cam08g1714 Cam-Chr8:23433888 8.90E-295 dispersed
Cam08g1714 Cam-Chr8:23433888 Cam11g1152 Cam-Chr11:22609819 9.60E-212 dispersed
Cam08g1714 Cam-Chr8:23433888 Cam08g1453 Cam-Chr8:20830452 2.20E-200 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85388 PF00069 Pkinase 2.50E-38 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1714 - - - 0.0