Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1838 ATGGCAGGTTTCTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTAGAGAGATATTGGTCGGAGGCAAATCCGACGCCTGGAAAATTCCTTCTTCTCAATCTCAATCTCTCAATCAATGGGCTGAAGCCTCCCGCTTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGATTACGAAGCCTGCAATACCGAAAGCCCAGAACAGAGATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTCCGGCGCCTTCTCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGGGTGTTGGAATTGGTTTGTTGTGA 531 51.22 MAGFSRALFLLTFLLFSFSEAREILVGGKSDAWKIPSSQSQSLNQWAEASRFRIGDTLVWNYEEGKDSVLKVRKEDYEACNTESPEQRFEDGNTKVELQRPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISPAPSPAESEGPAVAPSSGAANLKVGLLAVIVGILGVGIGLL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24491265 24491874 + CaPI482276_08g018380.1 Cam08g1838 133889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1838 176 CDD OsENODL1_like 22 124 IPR041846 -
Cam08g1838 176 Gene3D - 20 128 IPR008972 -
Cam08g1838 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cam08g1838 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055(InterPro)
Cam08g1838 176 PANTHER BLUE COPPER PROTEIN 16 136 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cam08g1838 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055(InterPro)
Cam08g1838 176 FunFam Early nodulin-like protein 1 21 129 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1635 Cam-Chr5:23560896 Cam08g1838 Cam-Chr8:24491265 5.00E-26 dispersed
Cam08g1838 Cam-Chr8:24491265 Cam09g2002 Cam-Chr9:34655146 4.20E-19 dispersed
Cam08g1838 Cam-Chr8:24491265 Cam10g0519 Cam-Chr10:7691155 1.30E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1838 - - - 0.0