Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1932 ATGGATCTGCTGCGCTCGGAGCCAATGCAATTGGTGCAGCTGATCATTCCTAATGAATCGGCGCACAGGACGATTTCTTACCTCGGCGACCTCGGTCTCTTCCAATTCAACAATGTGAGTCACATTGCATTGGAAATCATCTTCTGGTTCCGTTTCCTTGTTCGTAATTGTATTGTGATTCTGAGTTTACTACTTGACTTCAATTTCGTAAAGCCTAATGTAGGTTTCCGAAGTTCTGGTTCAGTTTCTTTGTTTGTAATCGCCAATCCCATTGTAATTCTGAGTTTACTACTTGAATTTAATTTCGTAAAGGCTAATCTCAATGCATCTAGAAGCCCATTCCAGCGGACGTATGCTGCCCAGCAGTTATGTGCAGTATTTTTAGACAAAATATCTTATATTTGGTTTGATGGTGTTTGTTTGCCTGCTACTTTTACCAAGCAGATTAAAAGATGTGGGGAAATGGCTCGGAAGCTACGGTTTTTCAGGGAGCAAATGACAAAGGCTGGTATACTGCCGTCATCAAATTCTCTAGGGACTCCTGATTTTGATCTGGATAATTTGGAGGTTAAACTTGGAGAATTTGAGGTAGAGTTGTTAGAGATAAATGACAACAACGAAAAGTTACAACGCAATTATAGTGAGCTATTGGAATATAAGCTTGTACTCCAGAAGGTTGGTGAGTTTTTCCATCTTGCTCAAAGCATAGCTGCAGCTCAGCAAAGAGAACTGGAAGTGCAGCAAAACGGTGAAGGATCCATTGACACTCCCTTATTATTGGAACAAGAAATGACAACCGATTCAACGAAACAAGTTAAACTAGGATATATCAGTGGTCTAGTTCCGAGAGAAAAGGCAATGACTTTTGAAAGGATTTTGTTTCGTTCAACTAGGGGCAATCTGTATCTGAGACAAGCTGTGGTTGATGGTTCCGTCACTGATCCTGTAACTGCGGAGAAGGTTGAGAAAAATGTGTTTGTCATATTTTATTCTGGAGAGAGAGCAAAGGATAAAATTCTGAAAATATGCGACGCTTTTGATGCAAACCGTTACCCATTCACTGATGACTTGAGCAAACAAATTCAGATGATTACAGAGCTTCATCAGAAAATAGAGCCAGTTGGTGGCAAAGTAGTGTCTGGAAAACTCTCTGAATTGAAGACTACCATTGATATGGGGCAACTGCACCGAAGTAAACTCTTGCAGACGATTAGCCATCAGTATGAGCTGTGGAATCTTCTGGTAAAGAAGGAAAAATCTGTTTACCACACTTTGAATATGCTCAGTGTTGATGTTACAAAGAAATGCCTTGTAGGTGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGATTCAAAGTGTGATGCAGATGGCAACCCTTGACAGCAACTCACAAATCGAGGCTATCTTTCATGTTTTGCAAACAAAGGAAGCACCACCAACATATTTCCGCACAAACAAATTTACTTCTTCGTTTCAAGAAATCGTGGATGCATATGGGGTTGCTAAGTATCAGGAAGCAAATCCCGGAGTCTACACTATTGTCACCTTCCCTTTCCTGTTTGCTGTAATGTTTGGCGATTGGGGCCATGGAATATGCTTGTTGCTGGCAACATTATATTTTATAATAAGGGAGAAGAAGTTTTCCAGCCAGAAACTTGGAGATATCATTGAAATGACTTTTGGAGGTCGTTATGTTATCATGATGATGGCACTTTTTTCGATCTACACAGGACTTATCTATAATGAATTCTTTTCTGTCCCATTTGAACTGTTTGGGCCTTCTGCATACGGTTGTCGTGATACTTCATGCAGGGATGCTACTACCATTGGTTTAATAAAGGTTCGTGATACATATCCATTTGGTGTGGATCCTAAGTGGCATGGCACGCGAAGTGAGTTACCTTTTCTCAACTCTTTGAAGATGAAGATGTCTATCCTAGTGGGAGTAGCTCAAATGAATCTAGGAATTATACTGAGCTACTTCAATGCGAAATTCTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATATTCTTGAACAGCTTATTTGGTTACCTCTCACTTCTCATAATTGTAAAATGGTACTCTGGATCTCAAGCTGATCTGTATCACGTAATGATATATATGTTCTTGAGTCCTACTGATGATCTAGGTGAAAATCAGCTTTTCGAAGGACAGAAGTTTCTTCAGAGGCACCAAGGTCAATCCTACTCCGTACTTCACAACACAGATGAGAATCATGAAATGGAACAACACAACGGTTCCCGCGGCCATGAGTTTGATTTCAGTGAGGTTTTTGTACACCAACTTATACATACCATAGAGTTTGTTCTTGGTGCAGTCTCTAACACAGCATCCTATCTTCGTCTATGGGCCCTCAGTCTAGCGCATTCGGAGTTGTCGAGTGTATTCTATGACAAGGTTTTACTCCTAGCTTGGGGGTTCAATAGTTTGATCATCCGAATATTAGGAATAGCCGTTTTCATTTGTGCAACTGTCGGAGTTTTACTAATTATGGAAACTCTAAGCGCATTCCTACACGCCTTGAGGCTCCATTGGGTGGAGTTTCAGAACAAATTCTACGCAGGAGATGGATTCAAATTTTCTCCCTTCTCATTTTCGTTGCTTCGGGATGAGGATGAGTAG 2661 40.59 MDLLRSEPMQLVQLIIPNESAHRTISYLGDLGLFQFNNVSHIALEIIFWFRFLVRNCIVILSLLLDFNFVKPNVGFRSSGSVSLFVIANPIVILSLLLEFNFVKANLNASRSPFQRTYAAQQLCAVFLDKISYIWFDGVCLPATFTKQIKRCGEMARKLRFFREQMTKAGILPSSNSLGTPDFDLDNLEVKLGEFEVELLEINDNNEKLQRNYSELLEYKLVLQKVGEFFHLAQSIAAAQQRELEVQQNGEGSIDTPLLLEQEMTTDSTKQVKLGYISGLVPREKAMTFERILFRSTRGNLYLRQAVVDGSVTDPVTAEKVEKNVFVIFYSGERAKDKILKICDAFDANRYPFTDDLSKQIQMITELHQKIEPVGGKVVSGKLSELKTTIDMGQLHRSKLLQTISHQYELWNLLVKKEKSVYHTLNMLSVDVTKKCLVGEGWCPVFATNQIQSVMQMATLDSNSQIEAIFHVLQTKEAPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSSQKLGDIIEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDTSCRDATTIGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILVGVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWYSGSQADLYHVMIYMFLSPTDDLGENQLFEGQKFLQRHQGQSYSVLHNTDENHEMEQHNGSRGHEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNSLIIRILGIAVFICATVGVLLIMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPFSFSLLRDEDE 886
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25250437 25260379 + CaPI482276_08g019320.1 Cam08g1932 133983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1932 886 PIRSF ATP6V0A1 137 738 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Cam08g1932 886 PIRSF ATP6V0A1 735 886 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Cam08g1932 886 PIRSF ATP6V0A1 1 58 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Cam08g1932 886 PANTHER VACUOLAR PROTON ATPASES 1 883 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Cam08g1932 886 Pfam V-type ATPase 116kDa subunit family 746 878 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cam08g1932 886 Pfam V-type ATPase 116kDa subunit family 144 736 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cam08g1932 886 Coils Coil 185 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2151 Cam-Chr2:34301435 Cam08g1932 Cam-Chr8:25250437 6.10E-270 dispersed
Cam02g0507 Cam-Chr2:5724712 Cam08g1932 Cam-Chr8:25250437 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1932 K02154 - csv:101209817 1340.1