Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g1999 ATGACCTCCGACGGCGCCACTTCTGCCTCCACTTGCCGGCGGAAGCCGTCTTGGAGGGAGCGGGAGAATAATCGGACCAGAGAGCGTCGGAGGAGAGCCATCGCCGCTAAGATTTACTCTGGCCTTAGGGCTCAGGGCAACTTCAATTTGCCTAAACACTGTGACAACAACGAGGTCCTTAAAGCCCTCTGTGCTGAAGCTGGTTGGACCGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCGCCCCCAATTGATATTGTTGGCACTTCAACCAAAATCACCCCTTACTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCATTCCCCAGTCCTATGGGATCCTACCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTCTCGACGCCAACAATCCGTCGAACCTCATTCCTTATCTTCGCCAAGCGATTCCCATATCGCTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCGAGGACTCCGCAGCCATTCCCCAATTGGGAAGTCACTGCTAAAGAATCCTTATCCTCCTTGAATTACCCTTTCTTTGCAGTATCTGCTCCAGCTAGCCCGACTCGACCTCAGCTCCATACTCCCGCCACGATCCACAAATTCGACGAATCTGAATCATCCACCAATGAGTCCAGTCAATGGGCACTTCTCCGTGCCTATGCACCTTCTGTATCGACAATGCCAACATCTCCCACGTTCAACCTTGTGAAACCTGCTGACCAACATGCTCTACACGATGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTACAAGGTTAAGCCTTGGGAAGGGGAGAAGATTCATGATGTCGGATTGGAGGATTTAGAGCTCACACTCGGTAGCGGTAAGGCTCGAAGCTAA 936 51.92 MTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFPSPMGSYQVSPSSSSFPSPSRLDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVTAKESLSSLNYPFFAVSAPASPTRPQLHTPATIHKFDESESSTNESSQWALLRAYAPSVSTMPTSPTFNLVKPADQHALHDGFIKENGRGNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSGKARS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25763997 25765289 - CaPI482276_08g019990.1 Cam08g1999 134050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g1999 311 MobiDBLite consensus disorder prediction 14 30 - -
Cam08g1999 311 MobiDBLite consensus disorder prediction 93 132 - -
Cam08g1999 311 MobiDBLite consensus disorder prediction 1 30 - -
Cam08g1999 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 12 310 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cam08g1999 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1042 Cam-Chr7:24740667 Cam08g1999 Cam-Chr8:25763997 2.70E-44 dispersed
Cam01g1972 Cam-Chr1:33020205 Cam08g1999 Cam-Chr8:25763997 4.40E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52472 PF05687 BES1_N 2.80E-62 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g1999 K14503 - csv:101219853 531.946