Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam08g2015 | ATGTCGACAACCTCCATTACTATCCCTTCTCTTCAACCCCACTTGCGATTTCCCTCCCAAGAAAAGTCTCACAGATCTCGTTCTAGAGTTGGGTTCGTTTCCCTACGCCCAATCTACGCCGCCGACAGGGTTTCCTCCTCGTCTCCCTCGCCTGTTCAAGTGCCGCAGCGGACTGTTTCGCCGCCGGAACCCACGAAGCTTCCTTTGAGGAAGATTCCAGGTGACTATGGGCCGCCGATGTTTGGGGCGTTGAAGGACCGACAAGATTATTTCTACAATCAGGGAAGAGAAGAGTATCTGAAATCTCGAATGCTACGATATGAATCCACTGTTTATAGAACCAATATGCCACCGGGTCCATTTATCACTTCTGATTCTCGAGTTGTTGTTTTACTCGACGGGAAGAGTTTTCCTGTTCTTTTCGACAATTCTAAAGTTGAGAAGAAGGATCTCTTTACCGGGACTTACATGCCTTCAACAGAGCTCACAGGCGGTTACAGGGTTCTCTCTTATATTGACCCATCTGAGCCCAATCACGAGAAGCTTAAACAGCTGATCTTCTTCCTCCTCAAGCACCGTCGGGACAAAATTATGCCCGAATTTCACTCTACTTTTTCTGAGCTATTCGAGACTCTGGAGAAGGATTTGGCTGCTGCTGGTAAAGCAGAGTACAATGCTTCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTTTTCGGCGCCAATCCGGTCGATACAAAATTGGGTCGGGACGCTCCGAAATTGATTGCGAAATGGGTTTTGTTCCAGCTTGGCCCTGTTCTCAGTCTCGGCCTCCCCAAGGTTGTCGAGGAGCTTCTCCTCCGCACGTTCCGCCTCCCGCCGGCGCTGATCAAAGCCGATTACCGGCGGCTGTACGACTTCTTTTACCAATCGTCGGAGGCGGTGTTTGAGGAAGCAGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAACTTGCTATTTACAACTTGTTTTAATTCATTCGGAGGGATGAAGATCTTCTTCCCCAATATGATCAAATGGATCGGCCGAGCCGGAGTGAATCTCCACACCCAACTCGCACGGGAGATTCGCACTGCCGTAAAAGCCAACGGTGGGAAAATCACGATGAGGGCTATGGAACAGATGCCGCTGATGAAATCAGTGGTGTATGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAAGAAAGACCTTGTGGTCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAAGTGATTTGTGGGTATCAGCCATTCGCTACCAGAGATCCGAAAATCTTCGACAGAGCCGATGAGTTCGTGCCTGATCGGTTCACCGGCGACGGCGAAGAGTTGCTGAAACACGTGCTATGGTCAAACGGACCGGAGACTCAATCGCCGACGGTTCAGAACAAACAGTGCGCCGGAAAAGACTTCATCGTCTTCATCTCTCGCCTTCTCGTCGTGGAACTGTTCCTCCGGTACGACTCGTTCGACATCGAAGCCGCAAACACTCCGTTAGGCGCTGCCGTCACTGTAACTTCCCTAAAGAAAGCAAGTTTCTGA | 1599 | 50.84 | MSTTSITIPSLQPHLRFPSQEKSHRSRSRVGFVSLRPIYAADRVSSSSPSPVQVPQRTVSPPEPTKLPLRKIPGDYGPPMFGALKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPSTELTGGYRVLSYIDPSEPNHEKLKQLIFFLLKHRRDKIMPEFHSTFSELFETLEKDLAAAGKAEYNASGEQAAFNFLARSLFGANPVDTKLGRDAPKLIAKWVLFQLGPVLSLGLPKVVEELLLRTFRLPPALIKADYRRLYDFFYQSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGVNLHTQLAREIRTAVKANGGKITMRAMEQMPLMKSVVYEAFRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEVICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLKHVLWSNGPETQSPTVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEAANTPLGAAVTVTSLKKASF | 532 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 25861797 | 25863395 | + | CaPI482276_08g020150.1 | Cam08g2015 | 134066 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam08g2015 | 532 | FunFam | Allene oxide synthase, chloroplastic | 67 | 532 | - | - | |
| Cam08g2015 | 532 | Gene3D | Cytochrome P450 | 63 | 532 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam08g2015 | 532 | SUPERFAMILY | Cytochrome P450 | 67 | 507 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam08g2015 | 532 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Cam08g2015 | 532 | MobiDBLite | consensus disorder prediction | 44 | 72 | - | - | |
| Cam08g2015 | 532 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Cam08g2015 | 532 | PRINTS | E-class P450 group IV signature | 386 | 402 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam08g2015 | 532 | PRINTS | E-class P450 group IV signature | 485 | 503 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam08g2015 | 532 | PRINTS | E-class P450 group IV signature | 439 | 457 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam08g2015 | 532 | Pfam | Cytochrome P450 | 361 | 459 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam08g2015 | 532 | CDD | CYP74 | 101 | 525 | - | - | |
| Cam08g2015 | 532 | PANTHER | CYTOCHROME P450 26 | 71 | 506 | - | GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam02g0223 | Cam-Chr2:3140648 | Cam08g2015 | Cam-Chr8:25861797 | 2.40E-104 | dispersed | |
| Cam02g0586 | Cam-Chr2:6674203 | Cam08g2015 | Cam-Chr8:25861797 | 8.50E-147 | dispersed | |
| Cam02g0585 | Cam-Chr2:6664919 | Cam08g2015 | Cam-Chr8:25861797 | 2.90E-147 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam08g2015 | K01723 | - | csv:101221732 | 987.638 |