Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2031 ATGCCTTTCTTTCACAAAAGCGCTTCAAATTCTCGGCTTCAACAGAAGGTACCCAATTCTGAATTTTCCGTTGGACTACCGGAACCGCTCGTTCAACGGCGGCTCACCAGACAGAGGAAGCTCCGGCATCTTACGGATAGGGACGTTGGCTTTGAACACCCCCGATCATCTCCCGATTGCCCCGATTTTTCGGCAAAACCTAGATCGCCTCTAGGGGGTTCCGAACGTTGGTCCTCGTCGGCTTTGCCCCTGCCTTTGCCTCTTCCGGAGTTCTTTCCGGTTCAGAGCCCGGAGTCCGGTTCTTGGAATTCTGGCCAAGGGCGTGTTGGATCGCCTATTGAAACTCCGGTCCGAAATTCCGCTATTAAAACTGTTAGGAAGAACTCTGATCGTGCAACAACGAATGTAAGTAAAAGTTTGGGCCACAATCAAAGGCGAGTTGCTATAGATTTGACCTTGGAAGTTAATAATGGCAATTCAGGAGGGGCCGGGGCTACCACATTTACAAGCCCTCAAAGCCTCTCTGTGAATCCGGAGAAATCGAATCCGAATAAGGAGTTTCTTTTTGGTTGTTCAGATCAGCTTCCAAACAACAAAGGCAGGGGTTCCCCTACTTATCCGAGTTTTGAAAGGGGTAACTACGATTTGACACCTAAGAATTCGTCGTCAAAGAGTGCGCCAACGAGCATTTTGCCTAGTCCTGCTGTTAGCCCACGAAGAACACACACTGGAAATTTTTTTGTTTCTGGTTTGACTCACCATGAATATCAGGAATCTCCTTCTAATAATTCTCCTAAAGTACCACCCCTTAAAACTGCACATAGTTCTCAACCTTCCCCTCTCCATAGCCCGACAGCTCGAGGTTCCATAAGCAATCCCAGATCTCCTAATGATGTGACATTTCTCCCACATCCCAAGTTACAAAAAGATAGTAGTATAGATCGGTCTGAAAGCCATGGTCATGTCAATGCCCATCCATTGCCCCTTCCTCCTCCATTAGTAGCCTCTTCACAAGCATCTCCACAATCTCTTCCGTCAAATGTTCATCATGTTTTTGAGAAGCCATACATTTCATCTATGAAAGGTCAGTGGCAAAAAGGAAAGCGAATTGGGCGTGGTACGTTCGGAAGCGTTTATCTAGCAACCAACAGAGAGACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCTGATGATCCTAAATCTGCTGAATGTATAAAGCAACTAGAGCAGGAAATTAAAGTCCTCAGTCAGCTTAAACATCCAAATATTGTACAGTATTATGGAAGTGAAATAATTGGTGATCGTTTCTATATATATTTGGAGTATGTTCATCCTGGTTCAATAAATAAATATGTTCGTGAACATTGTGGAGCCATTACAGAATCTATTGTTCGCAATTTCACCCGCCATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAGACAATTCACAGAGATATCAAAGGTGCAAACTTGCTAGTTGATTCATCAGGCGTTGTCAAACTTGCAGATTTTGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCGAACTGGATGGCTCCGGAGGTCATAAAGGCTGCTATGTTGAAAGATGCCAACCCTGATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGAATGGAAAACCTCCATGGTCTGAGTTTGAAGGGCATCAAGCTATGTTCAAGGTGTTGAATAAAACCCCGCCTACCCCAGAAAAGCTATCTCCTGAAGGGAAAGACTTCCTCCAGTGTTGCTTTCAGAGGAATCCAGCTGACAGACCAACAGCCTCGGTGCTCCTTGACCATCCTTTCTTAAGATCCTCAAATGACTCAAATGTTTCAATCCCCACGTCATCATTTTCAACAATGAACCTCTTGGAAAAATTGTTGAGTCCAAAGGACCCGCTTGATTCCAAAGGAGATCAGGCACAAAACTCTCCTGGAACTTCGGCTTCAAATGATTATTTGCTGTGCCGTAGTCCTTCAACGAACATTGCAAGCAATGTTCCTGCCAATGCTGTTACCAATCATCACTTTTCTATTTCAAGGACTCATAAAAGGGAAGTGCTGCACCTCTGA 2136 44.71 MPFFHKSASNSRLQQKVPNSEFSVGLPEPLVQRRLTRQRKLRHLTDRDVGFEHPRSSPDCPDFSAKPRSPLGGSERWSSSALPLPLPLPEFFPVQSPESGSWNSGQGRVGSPIETPVRNSAIKTVRKNSDRATTNVSKSLGHNQRRVAIDLTLEVNNGNSGGAGATTFTSPQSLSVNPEKSNPNKEFLFGCSDQLPNNKGRGSPTYPSFERGNYDLTPKNSSSKSAPTSILPSPAVSPRRTHTGNFFVSGLTHHEYQESPSNNSPKVPPLKTAHSSQPSPLHSPTARGSISNPRSPNDVTFLPHPKLQKDSSIDRSESHGHVNAHPLPLPPPLVASSQASPQSLPSNVHHVFEKPYISSMKGQWQKGKRIGRGTFGSVYLATNRETGALCAMKEVDLIPDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIIGDRFYIYLEYVHPGSINKYVREHCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPNWMAPEVIKAAMLKDANPDLALAVDIWSLGCTIIEMLNGKPPWSEFEGHQAMFKVLNKTPPTPEKLSPEGKDFLQCCFQRNPADRPTASVLLDHPFLRSSNDSNVSIPTSSFSTMNLLEKLLSPKDPLDSKGDQAQNSPGTSASNDYLLCRSPSTNIASNVPANAVTNHHFSISRTHKREVLHL 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25951119 25955515 + CaPI482276_08g020310.1 Cam08g2031 134082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2031 711 MobiDBLite consensus disorder prediction 162 182 - -
Cam08g2031 711 MobiDBLite consensus disorder prediction 96 135 - -
Cam08g2031 711 Pfam Protein kinase domain 365 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2031 711 MobiDBLite consensus disorder prediction 1 79 - -
Cam08g2031 711 MobiDBLite consensus disorder prediction 41 55 - -
Cam08g2031 711 ProSiteProfiles Protein kinase domain profile. 364 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2031 711 MobiDBLite consensus disorder prediction 117 135 - -
Cam08g2031 711 MobiDBLite consensus disorder prediction 650 674 - -
Cam08g2031 711 FunFam Mitogen-activated protein kinase kinase kinase 5 361 661 - -
Cam08g2031 711 MobiDBLite consensus disorder prediction 162 346 - -
Cam08g2031 711 Gene3D Transferase(Phosphotransferase) domain 1 361 654 - -
Cam08g2031 711 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 21 629 IPR050538 -
Cam08g2031 711 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524(InterPro)
Cam08g2031 711 MobiDBLite consensus disorder prediction 657 674 - -
Cam08g2031 711 SUPERFAMILY Protein kinase-like (PK-like) 341 655 IPR011009 -
Cam08g2031 711 MobiDBLite consensus disorder prediction 7 21 - -
Cam08g2031 711 SMART serkin_6 364 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2031 711 MobiDBLite consensus disorder prediction 214 298 - -
Cam08g2031 711 MobiDBLite consensus disorder prediction 96 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0978 Cam-Chr5:8845141 Cam08g2031 Cam-Chr8:25951119 2.30E-89 dispersed
Cam06g0599 Cam-Chr6:8128047 Cam08g2031 Cam-Chr8:25951119 2.30E-59 dispersed
Cam08g2031 Cam-Chr8:25951119 Cam10g1489 Cam-Chr10:28603421 3.20E-49 dispersed
Cam01g1708 Cam-Chr1:30668315 Cam08g2031 Cam-Chr8:25951119 5.50E-141 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85393 PF00069 Pkinase 2.70E-69 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2031 - - - 0.0