Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2074 ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGAGGAGGCGGAAGACCTCCGGCGAACTATCCATTAGCGCGACAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGCATGGGGAGTATAGGCAAGGATTTTGGGTCGATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACGATGGCATCTTCTGCTGCTGCTGTTGATAAAGAAGGGGCTGGTAGTGTTGGTCGTAGTGGTGGGTATTTGCAGAGACAGGGCTCCTTGACGCTGCCTCGGACACTCAGCCAGAAGAAGGTGGATGAGGTATGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGATGGGGCTACTGTTGCTTCTAATTTGCAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAGGATACTCAGGTGACTGCAAACCCCAACAATGGAGGGTTCTTTGGCAATAACACTGGTTTTGGAATTGGTTTTCAGCGGCAGGCTAAAGTTCCTGAGAATAATAATCATATTCAGATTCAATCGTCGAACTTATCGCTGAATGTCAATGGAGTCAGAACACATCAGCCGCAGCCAATTTTTCCAAAGCAGCCTGCTGTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGAATTAGAGGGGGAATTATGGGGATTGGAGATCAAGGGTTGAATACAACTTTGATGCAAGGCTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTTAATATAGCAGCTGCTCCGTTACCTATTGCAACAGAATCGCCAAGGGACCAACTATCATCTGATGGGATTGGTAAAAGCAATGGTGATACCTCGTCTGTGTCTCCTGTGCCTTACGCGCTTAATGGTGGAATCAGGGGGAGGAGAAGTAACGGAATTGTTGACAAGGTTGTCGAGAGGAGGCAACGGAGAATGATTAAAAACAGAGAGTCCGCTGCAAGATCGCGGGCTCGAAAGCAGGCCTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAACAGGCAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAAGTAATGGATACGCAACAAGGAATAAAGAAGCGATGCTTAAGACGAACGCAGACTGGCCCATGGTGCCGTGTAGCATATGTCTCAAGGTGTCTTGCTTGCAGAGTATCCTCCTCCACCCTCTGCCATGGAGAGGGAAATAAGTTTTTTGTGGCATTTCCTGATATGGCCCGACTGCTGCTGTGGTTGTGGGTAAATGTCAATCCTGAATGCAGGATTCATCAGCGTTCAATTCATTGGCATGTCAACGGCTGCAACTGCCGTTCGATTTTCCTTTGTAATCTCTGCATCATGATGTTTTTGTTTTTGACTTCTGCCTCAGTTGGAAGTAGAGTGAGGAAGGCGCCGGACATGGGGTTTCAGGACCAAACGCCGTCGTCCAGACCAGCCTTTAGAGCTCGCGATTCCAGCCCCGATTCTGTCATTTATGCTCTCGAATCGAGTTTCAGTCTCTTCTCTTCTGCTTCCGCCAGTGTGGAGCGCTGCTCTTTTGCATCGGAGGCCCATGACCGCGATTCCCTCATCTCTGAAATCTCACTTGTAAATCTCATTTCCCTCTTATTTTCTTCTTGCATTGACTCAAATGGGGTTGGTTATTTTCTGCATTTGGCAGGGCATGATGAAGGAAACCACGAGAGTTGCGGTGGTCCAGATCCAAATCCAAACAAACCTGCGCTAAGCAACAAGCACAGTCGTCTCTATACAAAGGGAGAAAAAGCGAAAGCAATTCAAAAAGATGACAGCAATGTCGATTTAGAAGATGAGAATAGAACCGTCGATTCAGCGAGGAATTCCTTTTCTCTTGCCCTGAAAGAGTGTCAAGATCATAGATCCAGATCTGAAGCTCAATCCAGGAAGCTGGACAGAAGGAGACCTGCTTCATTGGATCTAAATAACGCTACTACAGCTTCCTCACCTCGTTTGGCAACTGTCAAGAAGAACCCTATAGTATCAACGCGTAAGACTGGAACATTTCCGAGCCCTGGGACGCCGAATTATCGGCACAATAGCTTTGGTATGCAAAAGGGGTGGAGCTCAGAGCGAGTGCCATTGCACAACAATGGCGGTCGGAAACATACTAATAACCCTGCATTGCTGACTCTCAACAGCGGCAGAACATTGCCATCGAAGTGGGAAGATGCTGAAAGGTGGATCTTTAGCCCCATATCCGGTGATGGGGTTGTGAGGAACTCAGTTCCACTTCCTCAACGGCGACCGAAGTCAAAGAGTGGGCCACTTGGCCCTCCTGGTATTGCATACTATTCACTATATTCTCCAGCAGCTCCAGCCTATGAAGGAGGGACTTTTGGGAATTTCATTACAGGGTCACCATTTTCAGCTGGAGTGATATCAACTAATGGCTTGGGGATTCATTCCGGTGGGCATGAAGGGGCCTTTCATGGACAAACAGAGCCCTCCATGGCACGTTCACTTAGCGTTCATGGGTGCTCGGAAATGTTGGGTCAATTGTCATCAACAGGCTTGCAAGAAGAATCAGGGGAAAATCTAGCTACGGTCAAGGATTCAGGGACGGATGTTTCTCGTGTTGTTTCAAGAAGGGACATGGCTACACAAATGAGCCCGGAGAGTAGTGTGCATTCATCTCCCAAGACAAGGCCGTCAATCTCTGCCTCCAGTTCATCTGCTATGCATATGTTTGAGCTGGGAGCTGTCACTTCTAAGTTGGAGATCAGGGATGTACAAGTTGATAATCAGGTTACTATGACAAGATGGTCCAAGAAACATAAAGCTTCATTTCCTTGGAAAGAGTCTCTTGATGACAAGAGGAAGAAAGATGCTGATGCGGTTTCTCGATGTTCGGATTTAGACATTCCTAACATAGGAAAAAGTATTTCAAAGGTTAAGCGTGAGGAAGCCAAAATAACTGCATGGGAAAATCTACAGAAAGCAAAAGCTGATGCAGCTATACGAAAACTAGAGATGAAACTGGAAAAGAAGAGAGCGACATCGATGGATAAGATCATGAATAAACTAAAATCTGCTCAGAAGAGAGCCCAAGAAATGAGGAGCTCAGTGATGGCAAACCATACTCTGTCTGTTACCAATTCCCTGTTATGGCCATTCAACCAGGAATACTTAGCTGAGCTCCCTATGTCTGCAGTTTGTTCTAGAACAGAAGTTTTTTTTTCATCAAAATTTCCCATTAATGTTGATCAAGGCAGTCATGGATCTTGTTTTGACAGATAG 3375 46.49 MNFKDFGNDPSAGNGGGGGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMASSAAAVDKEGAGSVGRSGGYLQRQGSLTLPRTLSQKKVDEVWKDIINEHASAKDGATVASNLQQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNTGFGIGFQRQAKVPENNNHIQIQSSNLSLNVNGVRTHQPQPIFPKQPAVTYGSQLALPSDGQLASPGIRGGIMGIGDQGLNTTLMQGSALQGGRMGVVNIAAAPLPIATESPRDQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRSNGIVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQKNRALEVMDTQQGIKKRCLRRTQTGPWCRVAYVSRCLACRVSSSTLCHGEGNKFFVAFPDMARLLLWLWVNVNPECRIHQRSIHWHVNGCNCRSIFLCNLCIMMFLFLTSASVGSRVRKAPDMGFQDQTPSSRPAFRARDSSPDSVIYALESSFSLFSSASASVERCSFASEAHDRDSLISEISLVNLISLLFSSCIDSNGVGYFLHLAGHDEGNHESCGGPDPNPNKPALSNKHSRLYTKGEKAKAIQKDDSNVDLEDENRTVDSARNSFSLALKECQDHRSRSEAQSRKLDRRRPASLDLNNATTASSPRLATVKKNPIVSTRKTGTFPSPGTPNYRHNSFGMQKGWSSERVPLHNNGGRKHTNNPALLTLNSGRTLPSKWEDAERWIFSPISGDGVVRNSVPLPQRRPKSKSGPLGPPGIAYYSLYSPAAPAYEGGTFGNFITGSPFSAGVISTNGLGIHSGGHEGAFHGQTEPSMARSLSVHGCSEMLGQLSSTGLQEESGENLATVKDSGTDVSRVVSRRDMATQMSPESSVHSSPKTRPSISASSSSAMHMFELGAVTSKLEIRDVQVDNQVTMTRWSKKHKASFPWKESLDDKRKKDADAVSRCSDLDIPNIGKSISKVKREEAKITAWENLQKAKADAAIRKLEMKLEKKRATSMDKIMNKLKSAQKRAQEMRSSVMANHTLSVTNSLLWPFNQEYLAELPMSAVCSRTEVFFSSKFPINVDQGSHGSCFDR 1124
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26280987 26291856 + CaPI482276_08g020740.1 Cam08g2074 134125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2074 1124 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 331 388 - -
Cam08g2074 1124 MobiDBLite consensus disorder prediction 1 26 - -
Cam08g2074 1124 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 410 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cam08g2074 1124 MobiDBLite consensus disorder prediction 659 722 - -
Cam08g2074 1124 CDD bZIP_plant_BZIP46 333 385 - -
Cam08g2074 1124 MobiDBLite consensus disorder prediction 286 315 - -
Cam08g2074 1124 MobiDBLite consensus disorder prediction 882 936 - -
Cam08g2074 1124 MobiDBLite consensus disorder prediction 599 618 - -
Cam08g2074 1124 Pfam Remorin, C-terminal region 1004 1073 IPR005516 -
Cam08g2074 1124 SMART brlzneu 329 393 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g2074 1124 Gene3D - 331 387 - -
Cam08g2074 1124 MobiDBLite consensus disorder prediction 684 722 - -
Cam08g2074 1124 MobiDBLite consensus disorder prediction 624 645 - -
Cam08g2074 1124 Coils Coil 1025 1045 - -
Cam08g2074 1124 Coils Coil 349 386 - -
Cam08g2074 1124 MobiDBLite consensus disorder prediction 659 682 - -
Cam08g2074 1124 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 336 351 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g2074 1124 Coils Coil 1047 1067 - -
Cam08g2074 1124 SUPERFAMILY Leucine zipper domain 333 381 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g2074 1124 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 331 382 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam08g2074 1124 MobiDBLite consensus disorder prediction 287 311 - -
Cam08g2074 1124 Pfam bZIP transcription factor 333 385 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g2074 Cam-Chr8:26280987 Cam10g1865 Cam-Chr10:32699776 3.90E-41 dispersed
Cam08g1304 Cam-Chr8:19334654 Cam08g2074 Cam-Chr8:26280987 6.90E-32 transposed
Cam10g0052 Cam-Chr10:2135761 Cam08g2074 Cam-Chr8:26280987 1.30E-11 transposed
Cam11g1569 Cam-Chr11:28460622 Cam08g2074 Cam-Chr8:26280987 4.20E-10 transposed
Cam01g1730 Cam-Chr1:30895718 Cam08g2074 Cam-Chr8:26280987 3.00E-68 wgd
Cam02g0637 Cam-Chr2:7345750 Cam08g2074 Cam-Chr8:26280987 1.20E-92 wgd
Cam05g2194 Cam-Chr5:30301546 Cam08g2074 Cam-Chr8:26280987 2.00E-134 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52480 PF03763 Remorin_C 1.60E-21 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2074 - - - 0.0