Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam08g2079 | ATGTCTAATTATGCTTTCTTGAATGACCAGCTCTCGAAGCGGACCTCCATTTTCGGTTTGCGCTTGTGGGTTGTTTTGGGTATTTGCGTTGGTGCCGCCATTGTTATCGTTCTGTTCCTCATTTCGTTATGGTTCACTTCCAGGCGCAACAGTTCCAATAAATCTAAACCCTCTCTGAACCCCACTATCCCAAATGTGTCTAAGGAAATCCAGGAAATACGAATCGATCATTCTCGGAATCCAACTCATTCTGACTCTAAAGTTCAATTAGCTTCTAACCCTGAGCCTTTGCCGGAGGCAGAGCCTTTAGCAACGCTGCTTCAGACGGAAGAAGGGAGCCCACCTAGTGGTCGCCATAGAATTCACATTGAAATTGGGAAGGACCACCGGATTTCGTACCCGGAGAGAGGTGGCGGTTCGTCTCACGGTAGCGGAGAGGCTAGGTCTGGTGATCAGGCGCCAATGGCTGTGCCGGAGGTTTCGCATTTGGGTTGGGGACATTGGTACACTCTCAGAGAGCTTGAGTATGCTACTAATAGTTTTGCGGATGAGAATGTAATTGGTGAGGGCGGATATGGTATTGTGTACCGTGGCGTTATGGAGGACAACACTGTGGTTGCTATCAAAAATTTGCTCAATAACAGAGGACAGGCTGAGAAGGAGTTTAAAGTTGAAGTAGAAGCAATTGGACGCGTACGCCACAAGAATCTGGTGCGTTTGCTCGGCTACTGTGCTGAAGGAGCTCATAGGATACTTGTCTATGAGTACATTGATAACGGAAACTTGGAACAGTGGCTTCATGGAGAAGTTGGACCTTGTAGCCCTCTCACATGGGACATTCGAATGAATATAATTGTTGGAACAGCAAAAGGGTTAACATACCTCCATGAGGGGCTCGAGCCTAAGGTTGTTCACCGTGATATCAAGTCAAGTAACATTTTGCTTGACAAGCAGTGGAATCCAAAGGTCTCTGACTTCGGGCTAGCAAAGCTTCTAGGCTCAGAGAGGAGTTATGTAACAACTCGGGTGATGGGAACTTTTGGATATGTAGCTCCAGAATATGCAAGTACTGGCATGTTAAATGAAAAAAGTGATGTATATAGTTTCGGTATCCTCATCATGGAGATAATTTCAGGGAGAAATCCAGTAGATTATAGCCGCCCTTCAGGAGAGGTCAACCTAGTTGAGTGGCTTAAAACAATGGTAAGTAATCGAAATGCAGAGGGAGTTCTGGATCCTAAGTTGCCTGAGAAGCCTTCAACAAGGGCACTGAAGCGTGCTCTGTTAGTAGCTTTACGCTGTGTGGATCCTAATGTTCAGAAGAGGCCTAAAATGGGGCATGTAATTCATATGCTTGAAGCTGACGAGTTTCCTTTCCGAGATGATCGTAGAGTGGGACGAGAACCAGGACGATCACTACTGAAGGAAAAGCTCATGGAAAGGCTTGTGAGTGAATCTGGAGAGAGCAGTGGATATGAAAGTGGAGCAACCCAAGCAAGCCGACATCTACGGAGAAAGCAAGAACTTGAAGAACAACAGCCTCGCGAACCTCACACTTTAAGGTGA | 1566 | 46.3 | MSNYAFLNDQLSKRTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTSRRNSSNKSKPSLNPTIPNVSKEIQEIRIDHSRNPTHSDSKVQLASNPEPLPEAEPLATLLQTEEGSPPSGRHRIHIEIGKDHRISYPERGGGSSHGSGEARSGDQAPMAVPEVSHLGWGHWYTLRELEYATNSFADENVIGEGGYGIVYRGVMEDNTVVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRILVYEYIDNGNLEQWLHGEVGPCSPLTWDIRMNIIVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNEKSDVYSFGILIMEIISGRNPVDYSRPSGEVNLVEWLKTMVSNRNAEGVLDPKLPEKPSTRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRVGREPGRSLLKEKLMERLVSESGESSGYESGATQASRHLRRKQELEEQQPREPHTLR | 521 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 26348287 | 26350675 | - | CaPI482276_08g020790.1 | Cam08g2079 | 134130 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam08g2079 | 521 | MobiDBLite | consensus disorder prediction | 499 | 521 | - | - | |
Cam08g2079 | 521 | PANTHER | OS01G0323000 PROTEIN | 6 | 488 | IPR052232 | - | |
Cam08g2079 | 521 | MobiDBLite | consensus disorder prediction | 125 | 154 | - | - | |
Cam08g2079 | 521 | MobiDBLite | consensus disorder prediction | 476 | 521 | - | - | |
Cam08g2079 | 521 | FunFam | Putative receptor-like serine/threonine-protein kinase | 257 | 467 | - | - | |
Cam08g2079 | 521 | CDD | STKc_IRAK | 187 | 453 | - | - | |
Cam08g2079 | 521 | Pfam | Protein kinase domain | 183 | 450 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam08g2079 | 521 | ProSiteProfiles | Protein kinase domain profile. | 181 | 439 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam08g2079 | 521 | ProSitePatterns | Protein kinases ATP-binding region signature. | 187 | 209 | IPR017441 | GO:0005524(InterPro) | |
Cam08g2079 | 521 | Gene3D | Transferase(Phosphotransferase) domain 1 | 257 | 463 | - | - | |
Cam08g2079 | 521 | FunFam | Probable serine/threonine-protein kinase At1g01540 | 161 | 256 | - | - | |
Cam08g2079 | 521 | SMART | serkin_6 | 181 | 459 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam08g2079 | 521 | SUPERFAMILY | Protein kinase-like (PK-like) | 162 | 453 | IPR011009 | - | |
Cam08g2079 | 521 | Gene3D | Phosphorylase Kinase; domain 1 | 155 | 256 | - | - | |
Cam08g2079 | 521 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 303 | 315 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g0543 | Cam-Chr2:6202243 | Cam08g2079 | Cam-Chr8:26348287 | 6.90E-141 | dispersed | |
Cam05g0162 | Cam-Chr5:1791345 | Cam08g2079 | Cam-Chr8:26348287 | 5.00E-170 | dispersed | |
Cam05g0999 | Cam-Chr5:9058338 | Cam08g2079 | Cam-Chr8:26348287 | 4.20E-73 | dispersed | |
Cam08g2079 | Cam-Chr8:26348287 | Cam09g2283 | Cam-Chr9:37299108 | 1.30E-145 | dispersed | |
Cam01g1736 | Cam-Chr1:30948296 | Cam08g2079 | Cam-Chr8:26348287 | 1.00E-198 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85395 | PF00069 | Pkinase | 2.50E-47 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam08g2079 | - | - | - | 0.0 |