Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam08g2100 | ATGGCCGCGGCAGATAACTGTGTCCGTGTCACTCGTGCTTCCAAGAAGAGAGCTGCGGCGGCCGCCGTGGTCGAGGGCCAATCCGCCAATAAAAAGCGGGTGGTTCTTGGAGAGCTTTCCAACATTCAGAATGTTAATGGGTCAGTGGCCCCACAGAAGAGGAAGGCCAAGTCCCAGATGACTAAATGCAAGCCTAAGAAGAGAGCGAAGGTTGGTGTTGCTCCAACGATGAAGACGACGGTTGTTTCTGAAGATAATGATCCCAAGTTGACCGTTGATGATATTTTGGACGACCCAGAAATGAAGGGGCCTTATTCATCGGATATTTATGCTTATCTTCGCAAAATGGAGGCGGAACCAAAAAGAAGGCCGATTCCAAATTACATAGAGAAGATTCAGACGGATGTAAGTGCTAATATGAGAGGGGTTTTGGTTGATTGGATGGTTGAGGTAGCAGAGGAATACAAGCTTGGCTCCGATACTCTGTATCTATCCATCTCTTACCTCGATAGGTTCTTATCAATGAACATCCTCAGTAGGCAAAGGCTCCAATTGTTGGGGGTTTCTTCAATGCTTATTGCCTCGAAGTATGAAGAGATCACCCCTCCACATGTGGAGGATTTCTGTTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAGATGGAAGCTGATATACTTAAGTCTCTGAACTTTGAAATGGGAAATCCTACTGCCAAGACATTCTTAAGGAGGTTCACTAATATTGCTCAAGAAGATTTCAAAATACCAAATCTGCAGTTGGAGTTTCTTGGTTATTACCTTGCTGAGCTTAGCTTATTGGACTACAATTTTGTGAAGTTCTTGCCTTCTTTGGTTGCTGCCTCTGTTGTATTTCTTGCAAAATTTATCATCCGACCAAAGCTGCATCCTTGGGGTCCAAACATGCAACAATACACAGGCTACAAGCCAGCTGATCTAAGGCCATGTGTGATTCTGTTACATGATCTGTATATGGCCAGAAGAGGGGGGTCTCTGATAGCTGTGAGAGAAAAATACAAGCTACATAGGTTCAAATGTGTTGCAATGATGCCTTCACCTCCCGAGATACCGTTTTCATATTTTGAAGAAGCTTAG | 1122 | 44.03 | MAAADNCVRVTRASKKRAAAAAVVEGQSANKKRVVLGELSNIQNVNGSVAPQKRKAKSQMTKCKPKKRAKVGVAPTMKTTVVSEDNDPKLTVDDILDDPEMKGPYSSDIYAYLRKMEAEPKRRPIPNYIEKIQTDVSANMRGVLVDWMVEVAEEYKLGSDTLYLSISYLDRFLSMNILSRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRRFTNIAQEDFKIPNLQLEFLGYYLAELSLLDYNFVKFLPSLVAASVVFLAKFIIRPKLHPWGPNMQQYTGYKPADLRPCVILLHDLYMARRGGSLIAVREKYKLHRFKCVAMMPSPPEIPFSYFEEA | 373 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 26488282 | 26490095 | - | CaPI482276_08g021000.1 | Cam08g2100 | 134151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam08g2100 | 373 | Gene3D | - | 124 | 237 | - | - | |
Cam08g2100 | 373 | PANTHER | CYCLINS | 86 | 349 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cam08g2100 | 373 | SUPERFAMILY | Cyclin-like | 97 | 236 | IPR036915 | - | |
Cam08g2100 | 373 | SMART | Cyclin_C_2 | 239 | 362 | IPR004367 | - | |
Cam08g2100 | 373 | CDD | CYCLIN_AtCycA-like_rpt2 | 239 | 353 | - | - | |
Cam08g2100 | 373 | Pfam | Cyclin, N-terminal domain | 108 | 236 | IPR006671 | - | |
Cam08g2100 | 373 | Gene3D | - | 108 | 358 | - | - | |
Cam08g2100 | 373 | PIRSF | Cyclin_A_B_D_E | 1 | 367 | IPR046965 | GO:0016538(InterPro)|GO:0044772(InterPro) | |
Cam08g2100 | 373 | ProSitePatterns | Cyclins signature. | 141 | 172 | IPR048258 | - | |
Cam08g2100 | 373 | FunFam | Cyclin A1 | 226 | 358 | - | - | |
Cam08g2100 | 373 | SMART | cyclin_7 | 146 | 230 | IPR013763 | - | |
Cam08g2100 | 373 | SMART | cyclin_7 | 243 | 331 | IPR013763 | - | |
Cam08g2100 | 373 | FunFam | Mitotic cyclin 6 | 124 | 224 | - | - | |
Cam08g2100 | 373 | Pfam | Cyclin, C-terminal domain | 239 | 361 | IPR004367 | - | |
Cam08g2100 | 373 | SUPERFAMILY | Cyclin-like | 239 | 364 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam08g1030 | Cam-Chr8:16541368 | Cam08g2100 | Cam-Chr8:26488282 | 4.00E-78 | dispersed | |
Cam08g1748 | Cam-Chr8:23722187 | Cam08g2100 | Cam-Chr8:26488282 | 4.40E-68 | dispersed | |
Cam08g2100 | Cam-Chr8:26488282 | Cam09g0235 | Cam-Chr9:2993662 | 3.30E-77 | dispersed | |
Cam02g0694 | Cam-Chr2:8189765 | Cam08g2100 | Cam-Chr8:26488282 | 5.80E-79 | wgd | |
Cam05g2238 | Cam-Chr5:30609286 | Cam08g2100 | Cam-Chr8:26488282 | 3.90E-131 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam08g2100 | K06627 | - | csv:101206145 | 697.197 |