Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2112 ATGGACAAAAGCAATATGCCACAAGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAATCAGTTTCTGATTCAGCCCAAATGCTTTATTCCTACAACACAGTTGTTCATGGCTTCTCCACAAGATTGACTGTCGAGGAGGCTAAGTTAATAGAAAAGCAAGAAGGAATTCTTGCTGTCATACCTGAGGTGAAGTATGAGCTTCATACCACTCGAACGCCTGAGTTTCTTGGACTTGGGAAGAGTGTTTCTTTCTTCCCGGCGTCGGAGAAGGTCGGGGAAGTGATCATTGGAGTTCTCGACACCGGTGTATGGCCTGAATTGGAGAGCTTCAATGATAGAGGGCTTGGACCAGTACCTGCAAGCTGGAAAGGTGAGTGTGAAGTGGGTAAAAACTTCACCTCATCTAGTTGTAACAGGAAATTGATAGGAGCCAGGTACTTTTCCAAGGGCTATGAAGCAGCCTTTGGTGCAATTGATGAATCCCAGGAGTCGAAATCGCCAAGGGACGATGATGGCCATGGTTCTCACACGTCAACAACCGCTGCAGGATCGGCTGTGACGGGTGCCAGCCTCTTTGGCTTTGCTGCAGGGACTGCAAGAGGAATGGCGGCTGAAGCTCGGGTTGCGACATATAAGGTATGTTGGCTTGGAGGGTGTTTCGGCACTGACATTTTAGCTGCAATGGATAAGGCTGTTGAAGATGGCGTCAATATTCTATCCATGTCGCTTGGTGGATCCTCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCAGCTCAGGGAATTTTTGTGTCATGTTCTGCTGGAAATGGTGGCCCATCCTCAGGTAGCTTGTCCAATGTGGCGCCATGGATAACCACGGTCGGCGCCGGGACTCTGGACAGAGACTTCCCAGCATATGTTACTCTTGGAAATGGGAAGAAGATCACAGGGGAGTCGCTCTACAGTGGAAAGCCTTTGCCGGACTCTTTACTACCAATTGTATATGCAGGCAATGCGAGTAACTCAACCAGTGGTAGCCTTTGTTTGAGCAGTACTCTGAATCCGGCGAAGGTGGCCGGAAAAATAGTCGTGTGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGGTTGGTGGTAAAAGAGGCCGGGGGTGTAGGGATGATTCTAGCCAACACTGAAACATATGGGGAAGAACAATTAGCCGATGCACATCTCTTGCCGACGGCGGCCGTTGGCCAAAAATCTGGCGACGCAATAAAGAGCTACATCATCTCCGACGCTAACCCAACAGCAACAATCAGCAGCGGCACCACAAGATTAGGCGTTCAACCGTCGCCGCTGGTGGCAGCATTCAGTTCTCGTGGCCCTAATCTCCTCACTCCACATATTCTCAAACCCGATTTGATAGCACCGGGAGTGAACATTCTGGCTGGATGGACCGGCGGCGCTGGACCAACTGGTTTAGACAGCGATAAGCGGCACGTGGCCTTCAACATCATCTCCGGCACATCAATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTTAAAGCCGCTCATCCAGATTGGAGCCCAGCTGCCATTAGATCTGCCCTAATGACCACAGCATACTCAACATACAAAAATGGCGAAGCGATTCAAGACGTATCCAACGGATCACCGTCGACGCCGTTCGATGTCGGAGCCGGACATGTAAATCCAACGGCTGCCCTTGATCCCGGCCTTGTTTACGATACCACCACCGACGATTACTTCGCCTTCCTCTGTGCCCTAAACTACAGCTCACTTCAAATTAAAGTAATCAGCAAGAAAGACTTCACCTGTAATAGAAACAAGAACTACAAATTGGAGGATCTGAACTACCCGTCATTTGCAGTTCCACTAGAAACCCCTTCCACCAAAGGAGGTGAAGACGTCGCTCCGACCACCGTAAAATATACAAGGACTCTGACCAACAAGGGTGCTCCGTCGACGTATAAGGTCTCAGTGACGGCGAAAAGTCCATCGGTGAAGATCGTGGTTGAACCGGAATCATTGAGTTTTGCAGAGGCAAATGAGCAAAAGAGTTATACAGTGACATTCATTGCTTCTCCAATGCCGTCGGGATCGGAGAGCTTTGCTCGTCTGGAATGGTCAGATGGGAAACACATTGTGGGCAGCCCCATAGCTTTCACCTGGACTTAA 2193 49.61 MDKSNMPQAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQEGILAVIPEVKYELHTTRTPEFLGLGKSVSFFPASEKVGEVIIGVLDTGVWPELESFNDRGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGAIDESQESKSPRDDDGHGSHTSTTAAGSAVTGASLFGFAAGTARGMAAEARVATYKVCWLGGCFGTDILAAMDKAVEDGVNILSMSLGGSSPDYYRDNVAIGAFSAAAQGIFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKITGESLYSGKPLPDSLLPIVYAGNASNSTSGSLCLSSTLNPAKVAGKIVVCDRGGNSRVQKGLVVKEAGGVGMILANTETYGEEQLADAHLLPTAAVGQKSGDAIKSYIISDANPTATISSGTTRLGVQPSPLVAAFSSRGPNLLTPHILKPDLIAPGVNILAGWTGGAGPTGLDSDKRHVAFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTAYSTYKNGEAIQDVSNGSPSTPFDVGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVISKKDFTCNRNKNYKLEDLNYPSFAVPLETPSTKGGEDVAPTTVKYTRTLTNKGAPSTYKVSVTAKSPSVKIVVEPESLSFAEANEQKSYTVTFIASPMPSGSESFARLEWSDGKHIVGSPIAFTWT 730
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26545423 26547615 - CaPI482276_08g021120.1 Cam08g2112 134163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2112 730 SUPERFAMILY PA domain 355 422 IPR046450 -
Cam08g2112 730 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 71 IPR037045 -
Cam08g2112 730 ProSitePatterns Serine proteases, subtilase family, serine active site. 504 514 IPR023828 -
Cam08g2112 730 Pfam PA domain 334 421 IPR003137 -
Cam08g2112 730 Gene3D - 591 729 - -
Cam08g2112 730 PRINTS Subtilisin serine protease family (S8) signature 172 185 IPR015500 -
Cam08g2112 730 PRINTS Subtilisin serine protease family (S8) signature 503 519 IPR015500 -
Cam08g2112 730 PRINTS Subtilisin serine protease family (S8) signature 94 113 IPR015500 -
Cam08g2112 730 FunFam Subtilisin-like protease SBT1.9 1 71 - -
Cam08g2112 730 ProSiteProfiles Serine proteases, subtilase domain profile. 67 574 - -
Cam08g2112 730 MobiDBLite consensus disorder prediction 162 184 - -
Cam08g2112 730 Pfam Subtilase family 96 550 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam08g2112 730 CDD PA_subtilisin_like 308 435 - -
Cam08g2112 730 Pfam Peptidase inhibitor I9 1 71 IPR010259 -
Cam08g2112 730 SUPERFAMILY Subtilisin-like 70 578 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam08g2112 730 Gene3D Peptidase S8/S53 domain 97 587 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam08g2112 730 FunFam subtilisin-like protease SBT1.5 302 442 - -
Cam08g2112 730 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 725 IPR045051 -
Cam08g2112 730 Gene3D - 302 442 - -
Cam08g2112 730 Pfam Fibronectin type-III domain 621 726 IPR041469 -
Cam08g2112 730 CDD Peptidases_S8_3 68 540 IPR034197 -
Cam08g2112 730 FunFam Subtilisin-like protease SBT1.5 96 313 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1524 Cam-Chr3:30176632 Cam08g2112 Cam-Chr8:26545423 7.50E-222 dispersed
Cam05g0909 Cam-Chr5:8165522 Cam08g2112 Cam-Chr8:26545423 3.80E-229 dispersed
Cam08g2112 Cam-Chr8:26545423 Cam09g0104 Cam-Chr9:1840967 1.30E-210 dispersed
Cam01g1779 Cam-Chr1:31352739 Cam08g2112 Cam-Chr8:26545423 2.70E-296 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2112 - - - 0.0