Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2147 ATGGCTCCTTGGTGGGGAAGAGAAAGCCATAAAGGAACCCCTGTTGTTGTAAAGATGGAAAATCCCAACTGGTCAATAGTCGAAGTTGAAAGTCCTTCCGATGATGACTTCATCATCGGCGCCGAGTCGCCACCGGGTCGAGCCCGAGACAAGGGACGAGGAAAAAATGCCAAACAGCTCACTTGGGTTCTTCTTCTTAAAGCCCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGATCAACATCGTCGCCGCCGTTAAACGCCGTCTTGCTTCTGGAAGAACCGACGCCGACGCCGACGCCGACGCTGACAACGCCGACGGCGGCGTAAGGGAGAACCCAACTGTCAAAACCAGGTTTTATTTGTTTATTAAGGCTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAGGTGGCGGCATATTACAAAGGTTGGCATTTTAAGGCACCCCATCTTCCATTGGACTACTTATGGACAACCCCATTTGGGGTTAAGGATGTTTTTGACTGGTTTTATTCGAAATGGGTTTTGATTCGGGTTGCATATTTTGCTCCTCCTCTACAGTTTTTAGCCAATGTTTGTATAGTGTTGTTCCTTATTCAGACTTTGGATAGGCTTATTCTTTGTTTGGGTTGTTTCTGGATCCGATTCAAGAAAATCAAACCTGTTCCTAAGATTGCTGCTTTTGATCTTGAGTCTGGAGAGAGTGGCTACTTCCCTATGGTTCTTGTACAAATTCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTTGATGACTCGGATGATCCAATCACCCAATTGCTGATCAAAGAGGAGGTATATAAATGGCAGCAACTCGATGCCAACATTGAATACCGACATCGAGTGATCCGAGAGGGCTATAAGGCAGGCAATCTCAAGTCTGCCATGAGTTGCAGCTATGTAAAAGACTATGAATTTGTTGCAATCTTTGATGCTGATTTTCAGCCTGCCTCGGATTTCCTCAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGGACTTGTTCAAGCGCGATGGTCGTTCGTCAACAAAGACGAGAACTTATTAACCAGACTGCAGAACATTAACTTAGCCTTCCATTTTGAAGTAGAGCAACAAGTGAATGGCGTGTTTCTCAATTTCTTTGGATTCAATGGTACTGCTGGAGTTTGGAGGATAAAGGCGCTTGAAGAAGCCGGTGGCTGGTTGGAGAGGACCACTGTTGAGGATATGGACATTGCCGTTCGTGCTCATCTTCATGGCTGGAAATTCATATTCCTCAATGATGTTGAGTGCCAATGTGAATTACCAGAATCGTATGAAGCATATAGAAAACAACAGCACAGATGGCATTCGGGACCGATGCAACTGTTTCGACTTTGTTTGCCTGACATAGTTCGATCAAAGATTGGCATATCAAAGAAATTCAATTTGATCTTCTTGTTCTTTCTCTTACGAAAGCTGATATTGCCATTTTATTCATTTACTCTCTTCTGCATAATTCTCCCAATGACGATGTTCGTTCCTGAAGCTGTGTTACCGGCGTGGGTTGTATGTTACATTCCAGCTACCATGTCCTTTCTCAACATCCTTCCAGCACCAAAATTCTTCCCCTTCATTGTCCCTTACCTCCTCTTTGAGAACACAATGTCAGTAACTAAGTTTAACGCAATGGTCTCAGGACTATTCCAGCTAGGTAGTGCATATGAGTGGGTCGTTACGAAGAAATCAGGCCGCTCGTCCGAGGGTGATCTTGCCTCAATGGTTGAGAAGAAAAAGCTGAACACTGAAAAGAGTGTCTCAGTAAACGACCTTGAGGAGAGCGAGTTGATCCGAAGACAGGACAAGAAGTTGCCAAGGAAGAAGCATAACAGAATATACATGAAGGAACTAGCACTGGCTTTCCTTCTTCTAACAGCATCTGCTAGAAGCCTCCTCTCAGCTCAAGGGATTCATTTCTACTTCTTGCTGTTCCAGGGTATATCCTTCCTCCTTGTCGGTCTAGACTTGATTGGCGAGCAGGTTGTTTGA 2109 44.62 MAPWWGRESHKGTPVVVKMENPNWSIVEVESPSDDDFIIGAESPPGRARDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALINIVAAVKRRLASGRTDADADADADNADGGVRENPTVKTRFYLFIKAFLWLSVLLLGFEVAAYYKGWHFKAPHLPLDYLWTTPFGVKDVFDWFYSKWVLIRVAYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPKIAAFDLESGESGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITQLLIKEEVYKWQQLDANIEYRHRVIREGYKAGNLKSAMSCSYVKDYEFVAIFDADFQPASDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIVRSKIGISKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAVLPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLASMVEKKKLNTEKSVSVNDLEESELIRRQDKKLPRKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVV 702
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26856318 26858868 - CaPI482276_08g021470.1 Cam08g2147 134198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2147 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Cam08g2147 702 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 173 701 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Cam08g2147 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 542 IPR029044 -
Cam08g2147 702 Pfam Glycosyl transferase family group 2 338 546 IPR001173 -
Cam08g2147 702 FunFam probable xyloglucan glycosyltransferase 5 237 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2848 Cam-Chr5:35544258 Cam08g2147 Cam-Chr8:26856318 0.00E+00 dispersed
Cam08g2147 Cam-Chr8:26856318 Cam09g0834 Cam-Chr9:8546514 4.20E-243 dispersed
Cam08g2147 Cam-Chr8:26856318 Cam08g1257 Cam-Chr8:18897857 2.50E-110 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2147 - - - 0.0