Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2175 ATGTTCTTCATTGAGGATTTGTGGCAGATGCTCTTCGTTCGAGGTTTTCAGGATACAACTCGACTTCTCTCTGAGTCTTTTATACGGACGATATCCGAATCCATGGCCAATTCATCTTGTGGGGTCTCGGAAATAGAACTCTGTAGGAACGATACGGCTGCGCTCCATTTCAAATTAGTCGCCATCGCCTCGATTCTAACATCGGGAGTCATCGGAATCGCCATTCCGTTGTTTGGTAGACAGAGTCGGTTCCTCAAAACAGACGGCAACCTGTTTGTGGCGGCGAAGGCGTTTGCCGCCGGTGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCGGATGGATCGAAGGCCCTCTCCGATCCGTGCTTGCCGGAATTTCCTTGGTCTAAATTCCCCTTCTCTGGATTCTTCGCGATGATGGCGTCGCTGTTGACGCTTCTCGTCGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGGATGATTCGGTCGAAAGAGGAGGCGAATCGGGTCGGGTCGATTATGGATTCCGGGTTGGAATCCGGCATTGTTCCGGCCGGAGATTTGAACGTGAAAGTGTTTGGGGAAGAGGACGGCGGCGCGATGCACATTGTCGGAATGCATGCCCACGCCGCCCACCACCGGCACAGTCATCCACAGGGGAAGCAGGCATGTGATGGGCACGTGACGGGTCATGATCATGGGCATGGGCACGGGCATGCCCATGGACATGTTCATTCTCATGGGCTGCACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTCATAATTGGGCTATCTCTTGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCTCTCTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCTCAGGCTCAATTCAACACCCTCTCCACCTCCCTCATGGCTGTCTTCTTCGCCATCACCACGCCCCTCGGCATCTCCATAGGCGCTGCCGTTGCCTCCACCTACAACCCCAACAGCACCGGGGCATTGGTTGCTGAAGGCATTTTGGACTCTCTATCGGCTGGAATTTTGGTGTACATGGCTCTGGTTGATTTGATTGCGGCCGACTTTCTTAGCAAAAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCGTATTGTACTCTCTTCCTCGGCGCGGGGTTGATGTCTTCGCTTGCGCTTTGGGCTTGA 1260 52.7 MFFIEDLWQMLFVRGFQDTTRLLSESFIRTISESMANSSCGVSEIELCRNDTAALHFKLVAIASILTSGVIGIAIPLFGRQSRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGMIRSKEEANRVGSIMDSGLESGIVPAGDLNVKVFGEEDGGAMHIVGMHAHAAHHRHSHPQGKQACDGHVTGHDHGHGHGHAHGHVHSHGLHGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGISIGAAVASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27141642 27144470 - CaPI482276_08g021750.1 Cam08g2175 134226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2175 419 Pfam ZIP Zinc transporter 56 416 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Cam08g2175 419 PANTHER ZINC/IRON TRANSPORTER 52 418 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cam08g2175 419 NCBIfam ZIP zinc/iron transport family 40 419 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cam08g2175 419 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g2175 Cam-Chr8:27141642 Cam11g1710 Cam-Chr11:29785393 7.10E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2175 K14709 - csv:101218224 734.176