Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2202 ATGTCCCCCTCCACTTTACTAATTGGTATGATGACCCGGGTGCGAACTAAGATGTTGAAGCTAAGGCTAAGACTTTTTACGGACCTGCGGAAGAAAGGACCGAGTCTGAACTTAAGAGTCAGAAATGAAAATTTGAAGGTGGTGGGCTCGTCGTTCCTTCATACTCCGCACGCTCGCTCTCCCAAGTCCCATCTTTCTCGAAATTTCACGGAATTCCCCGAATCAGAGACTATGTACTTGTCTGATAAGCCTCGCCCAATCGATATTTACAAGGAAGAAGGTAGCAGAGATATGATGATCGAGGTCGCCTCCAATGGCGACCACCATATTCAACCTCATCAGCCACAGCCACAGCCACAGCAGACTCATCAGCAGCACCAAATGATGCTTGGTGACAGCAGTGGTGAGGATCATGAAGTCAAGGCTCCCAAGAAGCGAGCGGAGACTTGGGTTCAGGATGAGACTCGAAGCTTAATTGCCCTACGCCGGGAGATGGATGGCTTGTTTAATACTTCGAAATCCAACAAGCATTTGTGGGAGCAGATATCGGCTAAGATGAGGGAAAGGGGATTTGATCGCTCCCCGACTATGTGTACTGATAAGTGGAGGAACTTGCTCAAGGAGTTCAAGAAAGCAAAGCACCATGACAGGGGAAGTGGCTCTGCTAAGATGTCGTGTTACAAGGAGATTGAAGAAATTTTGAAGGAGAGAAGCAAAAGTACGCAGTACAAGAGTCCCACGCCACCCAAGATTGATTCATATATGCAATTCTCAGACAAAGGAATAGAGGATAATGGTCTATCGTTCGGACCTGTTGAAGGTGGCAGACCTTCACTCAATCTTGAAAGACAACTAGATCACGATGGACATCCCCTTGCCATCACAGCAGCTGATGCAGTTGCTGCAACGGGCATTCCACCTTGGAATTGGAGGGAGGCATCAGGAAATGGTGGGGAGAGTCAAGCATTTGGCGGGAGAGTAATATCAGTGAAGTGGGGGGACTACACAAGAAGAATTGGTGTTGATGGCACCTCAGAGGCAATCAAGGAGGCAATCAAGTCTGCATTCAGATTGAGAACCAAACGTGCATTTTGGTTAGAGGATGAGGACCAGGTTGTCAGAAGTCTGGACAGGGACATGCCTTTAGGAAACTACACTCTTCACCTTGATGAAGGTGTGGCTGTTAAAATCTGCCTATATGATGAATCTGACCACTTACCGGTACATACTGAAGACAAAGTTTTTTACATTGAAGAAGATTACCGAGATTTTTTAGCTCGTCGAGGCTGGACATGCCTTCGGGAGTTTGATGGGTATAGAAACATCGATAATATGGATGACCTCCGTCCTGGTGCAATATACCGTGGTTATATTCCCTCTGTATATACCAATATGGATTGTTGGCAGTATCGTCTCATCTGTACACTTATTAGCGGATCAGTTATATTAGCCTGGTGA 1458 46.43 MSPSTLLIGMMTRVRTKMLKLRLRLFTDLRKKGPSLNLRVRNENLKVVGSSFLHTPHARSPKSHLSRNFTEFPESETMYLSDKPRPIDIYKEEGSRDMMIEVASNGDHHIQPHQPQPQPQQTHQQHQMMLGDSSGEDHEVKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGSGSAKMSCYKEIEEILKERSKSTQYKSPTPPKIDSYMQFSDKGIEDNGLSFGPVEGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREASGNGGESQAFGGRVISVKWGDYTRRIGVDGTSEAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGVAVKICLYDESDHLPVHTEDKVFYIEEDYRDFLARRGWTCLREFDGYRNIDNMDDLRPGAIYRGYIPSVYTNMDCWQYRLICTLISGSVILAW 485
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27359770 27364596 - CaPI482276_08g022020.1 Cam08g2202 134253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2202 485 CDD GT1 148 213 - -
Cam08g2202 485 MobiDBLite consensus disorder prediction 109 131 - -
Cam08g2202 485 SMART sant 146 208 IPR001005 -
Cam08g2202 485 PANTHER FI21293P1 113 450 - -
Cam08g2202 485 Gene3D - 150 212 - -
Cam08g2202 485 FunFam trihelix transcription factor GT-1 150 212 - -
Cam08g2202 485 Pfam Myb/SANT-like DNA-binding domain 149 233 IPR044822 -
Cam08g2202 485 ProSiteProfiles Myb-like domain profile. 142 206 IPR001005 -
Cam08g2202 485 MobiDBLite consensus disorder prediction 132 149 - -
Cam08g2202 485 MobiDBLite consensus disorder prediction 107 149 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52501 PF13837 Myb_DNA-bind_4 2.90E-20 CL0123 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2202 - - - 0.0