Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2219 ATGGCTTCCATATCACCTTACCGCCCAAACTTTGTGTTCTCTTCATTTCCGACCCGTGTTCCGAACTCAAACCCTCTATTTCATGGAGTTCGATTCCGAGGTTTATCCCACCATAAGCCTTTCCTTCGCGGTTCCCTTGCTGTGGCGAGATTTGGGTTTAAACCCGAGTTCTTGCCTGACCCGGATAACGCCGAGGGCTTTGTTAGAGACTTGTTTGGCAAAGCTGAGAGCGTTCTTTACACGATTGCCGACGCCGCCGTGTCTGCTTCGCCGGAGAATGTTACCACCGCCAAGCAGACTGACGATTGGTTTACGGGGATTACCAATTATATGGAGAGCGTCCTTAAAATTCTTAAGGATGGACTTTCTACTCTACATGTTCCTTATGCCTATGGTTTTGCTATTATACTCCTTACAGTTCTTGTTAAGGCTGCTACGTTTCCTTTAACAAAGAAGCAGGTAGAATCTGCAATGGCGATGCGTTCTTTGCAACCACAAGTGAAGGCTGTTCAACAACGCTATGCTGGGGATCAGGAGAGGATTCAACTTGAGACGGCTAGACTGTACAAATTAGCTGGCATAAACCCATTGGCAGGATGCCTACCCACGTTGGCAACAATTCCTGTATGGATTGGACTATACAGGGCTCTTTCAAATGTGGCCAACGAGGGTCTCCTCACGGAAGGTTTTTTCTGGATACCCTCTCTAGCTGGTCCAACTACGATTGCCTCTCGACAAAATGGGAGTGGTATTTCTTGGCTCTTTCCATTTGTTGATGGTCACCCACCACTTGGGTGGTCAGATACCTTTGCGTATCTTGTCTTGCCTGTGTTGCTGGTCGTTTCGCAGTACATCTCTGTTCAAATTATGCAATCATCGCAGACTAATGATCCAAGCATGAAGAGTTCTCAAGCGATAACGAAGTTCCTACCATTAATGATTGGATATTTTGCACTTTCAGTTCCTTCTGGTCTAAGTCTTTATTGGCTTACTAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTTAGGTGGTGCCAAAACCCCCGACAAACAGTTCATTGATGAAATCATCAAACAAGAACAAGAACAAGCCCGTGTCCAGAGTGAAGCGCCCAAGTTAAACTCAATCTCAAGTAGCACAGTAGCCCGACAAGAAGAGAAGCTGACAGCAGAAGGGCTAAAGCCTGGTGAAAGATTTAAACAGTTGAAGGAGCAAGAGGCTAGGTTAAGACAGCTAGAAGAAGAAAAAAGGAAAGCTGAAAAGGTAGCCACGGTTGAATCTCTGACAATAAATGACAGTGACAAGAGTGCAACTGTTGGAGTTGTTGTCAATGGCAGTCTTTCTAGGCAGGATGTAAAGGAGGATCGGAACTCCATTCCCACGACTTCTAGACAAAGAACTGATGCGGACAACGAGCCAAGTGCAACTCAAGGAGAGGGAGTACTCGAGACATACACCAGGGTGGCCAAGGATGCCAAACTAAACGGAGAAGAACAAAGAGAGTAA 1518 45.98 MASISPYRPNFVFSSFPTRVPNSNPLFHGVRFRGLSHHKPFLRGSLAVARFGFKPEFLPDPDNAEGFVRDLFGKAESVLYTIADAAVSASPENVTTAKQTDDWFTGITNYMESVLKILKDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQTNDPSMKSSQAITKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKLGGAKTPDKQFIDEIIKQEQEQARVQSEAPKLNSISSSTVARQEEKLTAEGLKPGERFKQLKEQEARLRQLEEEKRKAEKVATVESLTINDSDKSATVGVVVNGSLSRQDVKEDRNSIPTTSRQRTDADNEPSATQGEGVLETYTRVAKDAKLNGEEQRE 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27461628 27466081 + CaPI482276_08g022190.1 Cam08g2219 134270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2219 505 Pfam 60Kd inner membrane protein 131 345 IPR028055 -
Cam08g2219 505 Coils Coil 403 426 - -
Cam08g2219 505 CDD 5TM_YidC_Alb3 132 345 IPR047196 -
Cam08g2219 505 PANTHER OXA1 48 379 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Cam08g2219 505 NCBIfam membrane protein insertase YidC 131 345 IPR028055 -
Cam08g2219 505 MobiDBLite consensus disorder prediction 448 505 - -
Cam08g2219 505 MobiDBLite consensus disorder prediction 466 485 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0164 Cam-Chr3:2529064 Cam08g2219 Cam-Chr8:27461628 4.50E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2219 K03217 - csv:101205346 914.064