Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2233 ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGGGAGGCGGAAGCTGCTGCCGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAGGGAAGCTGTTAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCCTGGCGCCGGCGGTAGACAAACGGAGAGCCAGGGCTTGACGCCGGAGGAGATGATTCGGCTTCCAACTGGTCCGAAAGACCGCTCTGGTGAGGAAGTGCGTCCTGGCCGCCTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGTCTGCTGGTCGATATCGAGACCGTGATGAAGGCGATGGGTCCTGGGGTAGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGCAGGGGTCCATCTCCTAGGGCTTCCAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCGCATTGGATTCGGGTCGACAAAATAGGTACGGGTCGCTAGGCGGTGGCGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTCAAAAAGCCTATTCCATCAAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCAAACGAGCCTGATCGCTGGGGTAGAGGTCGTTCACGTGATAGTGACACAGAACGACCCCGATTAGTACTGGATCCACCTAAAGGTAATGTCGTTACAAATGAAGCAACGAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGTAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTCGGGGATGCTAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGATCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTCAAGGGATAGATGGTAA 1596 52.07 MSKPWGGIGAWAADAERAEAEEREAEAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGPGAGGRQTESQGLTPEEMIRLPTGPKDRSGEEVRPGRLGGGFPTYDRHSMSAGRYRDRDEGDGSWGSGRRSYGGFDEERRGPSPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGVGGIASRADEVDNWASVKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRSTDDRKPIQGARDRGFLGNRDVERSRDRW 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27541036 27545307 + CaPI482276_08g022330.1 Cam08g2233 134284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2233 531 MobiDBLite consensus disorder prediction 303 322 - -
Cam08g2233 531 MobiDBLite consensus disorder prediction 276 302 - -
Cam08g2233 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 441 IPR010433 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)
Cam08g2233 531 Coils Coil 15 37 - -
Cam08g2233 531 Coils Coil 403 430 - -
Cam08g2233 531 Pfam Plant specific eukaryotic initiation factor 4B 1 459 IPR010433 GO:0003743(InterPro)
Cam08g2233 531 Pfam Plant specific eukaryotic initiation factor 4B 457 517 IPR010433 GO:0003743(InterPro)
Cam08g2233 531 MobiDBLite consensus disorder prediction 227 248 - -
Cam08g2233 531 MobiDBLite consensus disorder prediction 117 132 - -
Cam08g2233 531 MobiDBLite consensus disorder prediction 439 531 - -
Cam08g2233 531 MobiDBLite consensus disorder prediction 59 81 - -
Cam08g2233 531 MobiDBLite consensus disorder prediction 483 531 - -
Cam08g2233 531 MobiDBLite consensus disorder prediction 1 344 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1214 Cam-Chr2:24107461 Cam08g2233 Cam-Chr8:27541036 9.80E-27 dispersed
Cam08g2233 Cam-Chr8:27541036 Cam02g0451 Cam-Chr2:5223378 4.80E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2233 K03258 - csv:101206526 919.842