Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2249 ATGGGCATTTGCAAATGCCCAACATCAGCCATCCAGTATGAAACCGCAGAGCAATACGCCAAACCAAATGCGGCTCATTGCCTCCCCCACCACATGCCCTCTAATTCAAACCAATTACCTTTGTTTGACTTTTGTATTCAACCCTCGATTAGCTTCAGAATCGGAATAAGGGAGGTGACGATGAGGACTGGATCACCACTTGGATTGTTCATTTTCATCACCGCTCTTCTCTTACTTCAATTATCCACAGTGGCAGACCCCAGATCCCGGACCGTCAAGATACTATGTTCAACCGTGCTAGAGCACAATACAACCGCCTTTGTGCCCAATTTCGTGGCCACAATGCAAATAATCAGCGACCAAATGCGAACCGGTGGGTTTGGAGTCGCAGTTGTGGGTAAAGGCCCGGACGCCAACTACGGCCTTGCTCAATGTTACGGAGATTTGTCGCTGATGGACTGTGTGTTGTGTTATGCGGAAGCCCGTACTGTCCTTCCTCAATGCTTCCCTTTCAACGGCGGCCGGATTTTCCTGGATGGCTGCTTCATGAGGGCTGAGAACTACAGCTTTTATGACGAATTTTCGGGGCCTCTTGACAGGGCTGTGTGCGGTAACAATTCCATCACCAACTCCCTTTTTGGACAGTCGGTCAGGCAGGCTGTGGCCCGAGCAACCCAAACTGCACCCAACAATGGAGGGTATGCCAGAATTCAAGTGGCTCCCCCTGGAACCCCCAATGCCTCCGTTTACCTGTTGGCTCAGTGCTGGAGGAATTTGAATCGCACCTCCTGCACTTCCTGTTTGCAAAACGCCTCTGCTTCTATCTTGAAATGCTTGCCTCGATCCGAAGCAAGAGCCCTCAACACAGGTTGCTTCATGAGATACTCTAACCTTGACTTCTTAAATGCCGAAGCTTCAGCTTCAAGGTCAAGGGGTACTATTATAGAAATTGTAGTCTCCCTGGTGAGTTCTGTTGCTGTTTTAGTCGTTGGAGTGTTGATTGGAATCTACATCTGGAATAACAGATATGTAAAGAAGAAGCGAAGAGGTTCAAACGATGCAAACAAGATGGCAAAAACACTGAACAATAGTAGCTTGAATTTCAAATACTCTACCCTTGAAAAGGCAACAGGATCTTTTGCTGAGGCTAACAAGCTTGGACAAGGAGGATTTGGCACTGTTTATAAGGCAATTCTGTCGGACGGAAGAGAGATAGCTGTGAAGAGGCTTTTCTTCAACAACAAACATAGAGCAGCAGACTTTTACAATGAAGTAAACATAATCAGTAGTGTGGAGCACAAAAACTTAGTACGGTTGCTCGGTTGTAGTTGTTCTGGACCTGAAAGTCTGCTCGTCTATGAATACCTTGCCAACAAGAGTCTCGACCGCTTCATTTTCGATCGAGATAGAGGTAAATCGCTCAATTGGGAGAAGAGATTTGATATCATTGTGGGAACAGTTGAAGGTTTGGCTTACCTTCATGAGAACTCGAAAACCAAGATCATACACAGAGACATCAAGGCTAGTAACATCCTGCTAGACTCCAAGCTTCGAGCTAAAATAGCTGATTTTGGATTAGCTAGATCCTTTGAAGAAGATGAGAGTCACATCAGCACGGCCATTGCTGGAACCTTGGGATACATGGCGCCAGAGTATTTAGCTCATGGGCAGCTAACAGAAAAGGCAGATGTGTACAGTTTTGGTGTGGTTTTGCTGGAGACCGTGACCGGCATACAAAACAGTAGAAGCAAAACCTCTGACTACTTGGAAAGCATAGTACTAATTGCATGGAAGCACTTTCAATCGGGGACAGTGGAAAGGATATTGGATCCGAACCTTATGGTTGAGGAAGATGGGAGCATAAAAGAGGAGATATTGAGAGTGGTGCAGATAGGGCTTCTTTGCACACAGGAGACTGCATCTCTGCGACCCACAATGTCCAAGGTACTGCAGATGCTGATGAAGAAGGAAGAGGAACTTCCGGCGCCGACCAACCCACCGTTCATGGACGAGAGGACAATGGAATTAAACGACACCAGTGGCACTGAGGATCCATCATGCTTCAACCTCACGAAAGCTTCTTCCTCAGCGGCCACCGTGACCCATAGTTCATTTCATCCCAGAACCCCGGATTCCATGGCGATCCAGCTTGTTTATGCTTCCAAATATGTCCTATTTTCAATCATCACTATTCTTCTGCTGCTCCCAACTTCGACTCTGGGGAAGCCAAGAGATCAAACTGTGAGAGTCATCTGCGGGAAAGAACTGGAGCACAACACCACCGCCTACGTCCCAAACTTTTTTGGTTCCATGGAAAAAGTTAGACAACAAATCGGAACTTCAGGATTTGGAACCGCCGGTACAGGAATAGGACCTGATGCCAGCTATGGGCTTGCCCAATGCCATGGAGATCTCTCACCCCTTGAATGTGTGCTGTGTCATTCTCAAGCACGTACAATGCTCCCCCAATGCTTCCCTTTCAACGGCGGCCGAGCTTTCATTGATGGCTGCTTCCTGAGGTTCGAAAACTATACCTTTTTCGACGAATACAAAGGACCTGAAGACACTGCAGTTTGTGGGAACTTCACCCAAAATGACCCCAACTATAGACAAGCAGTCAAGGAGGCAGTGATGCAAGTGGTTAACGGTGCACCAGATAACAGAGGCTTTGCGAAAGCTCGAATGGCTGTGGCTGGGATGGCAAATGAGTCCGCCGCTTATGCTCTGGGTCAGTGCTGGAGAAGTTTGAACCGCAGCTCTTGCAGTTCATGTTTGTTAATTGCTTCTGCTTCAATGTTGCGATGTTTACCTCAATCTGAAGGACGAGCGCTGAACACAGGCTGCTTCATGAGATATTCAAATACAGACTTCCTCAACAAGGACATCAAAAATAGTTCCAGAGGTGGCACAAGAACTGAATTGATAGTTTCAGTTTTGAGTTCTGTTGTTGTTTTGATAGTTGGCCTGGCGATTGGAGCTTATATCTGGAAGCGCAGACATATACAAAAGAAAAGGAAAGGAGGTTCAACTGACGTGAAGAAGTTTGCAAAAACTCTTCAAGATAGTAACTTGGAATTCAAGTACTCAACCCTTGAAAAAGCTACCAACAATTTCAGCCTTGATAACAAGATTGGACAGGGCGGGTTTGGCTCTGTTTATAAGGGAACTCTATCCGATGGAAGAGAAATTGCTGTGAAGAGATTCTTCTTTGATAACAGACATAGAGCAGCAGATTTCTACAATGAAGTAAACATGATCAGCAGTGTCGAACATAAAAATCTGGTAAGATTACTTGGATGCAGTTGTTCTGGACCTGAAAGCCTTCTTGTTTATGAATTCCTACCAAACAAGAGTCTCGATCGCTTCATTTTCGATACCAGTAGCAGTAAAGCTCTTGATTGGGATAAGAGATACAACATCATCACTGGAACGGTTGAAGGTTTAATATATCTACACGAAAATCCAAAGATCAAAATCATACACAGGGATATAAAGGCGAGTAATATCTTGCTGGATCTAAAGCTTCAAGCGAAAATAGCAGATTTTGGATTAGCAAGGTCTTTCCAAGAAAGCAAGAGCCATATTAGCACGGCTGTTGCAGGAACCCTAGGATATATGGCTCCGGAGTATCTAGCTTATGGCCAGTTATCAGAAAAGGCCGATGTCTACAGCTTTGGAGTGCTTTTGTTAGAAATTGTTACAGGATTGCAATATAGTGGCATTCAAGTCTCCGGCAACATTGAAAGTCTGATCACTGCTATGTGGAGACATTTCCAAGCAGGCACAGTTGAGAGATTATTTGATCCAAATCTCAATCTTCAGAATCACTATAACAAGAAAGTGAAGGATGAAGTAAAGAGAGTGGTGCACATAGGGCTCTTATGCATCCAGGAGATTCCATCTCTACGACCAACAATGTCGAAGGTTCTACGAATGCTGACCATGGAGGAAGAGCATCTTCCTCCACCCACCAAACCACCCTTCACGGATGAGATGACCATGGAACTTGATGATTCATGCAAGTACTCACGATGTTATTCTAATACGGAGGGATCTTCTACTGCCACAGTCGGCCATAGTTCTTTCCATCCCAGATAA 4098 45.39 MGICKCPTSAIQYETAEQYAKPNAAHCLPHHMPSNSNQLPLFDFCIQPSISFRIGIREVTMRTGSPLGLFIFITALLLLQLSTVADPRSRTVKILCSTVLEHNTTAFVPNFVATMQIISDQMRTGGFGVAVVGKGPDANYGLAQCYGDLSLMDCVLCYAEARTVLPQCFPFNGGRIFLDGCFMRAENYSFYDEFSGPLDRAVCGNNSITNSLFGQSVRQAVARATQTAPNNGGYARIQVAPPGTPNASVYLLAQCWRNLNRTSCTSCLQNASASILKCLPRSEARALNTGCFMRYSNLDFLNAEASASRSRGTIIEIVVSLVSSVAVLVVGVLIGIYIWNNRYVKKKRRGSNDANKMAKTLNNSSLNFKYSTLEKATGSFAEANKLGQGGFGTVYKAILSDGREIAVKRLFFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLANKSLDRFIFDRDRGKSLNWEKRFDIIVGTVEGLAYLHENSKTKIIHRDIKASNILLDSKLRAKIADFGLARSFEEDESHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVVLLETVTGIQNSRSKTSDYLESIVLIAWKHFQSGTVERILDPNLMVEEDGSIKEEILRVVQIGLLCTQETASLRPTMSKVLQMLMKKEEELPAPTNPPFMDERTMELNDTSGTEDPSCFNLTKASSSAATVTHSSFHPRTPDSMAIQLVYASKYVLFSIITILLLLPTSTLGKPRDQTVRVICGKELEHNTTAYVPNFFGSMEKVRQQIGTSGFGTAGTGIGPDASYGLAQCHGDLSPLECVLCHSQARTMLPQCFPFNGGRAFIDGCFLRFENYTFFDEYKGPEDTAVCGNFTQNDPNYRQAVKEAVMQVVNGAPDNRGFAKARMAVAGMANESAAYALGQCWRSLNRSSCSSCLLIASASMLRCLPQSEGRALNTGCFMRYSNTDFLNKDIKNSSRGGTRTELIVSVLSSVVVLIVGLAIGAYIWKRRHIQKKRKGGSTDVKKFAKTLQDSNLEFKYSTLEKATNNFSLDNKIGQGGFGSVYKGTLSDGREIAVKRFFFDNRHRAADFYNEVNMISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDTSSSKALDWDKRYNIITGTVEGLIYLHENPKIKIIHRDIKASNILLDLKLQAKIADFGLARSFQESKSHISTAVAGTLGYMAPEYLAYGQLSEKADVYSFGVLLLEIVTGLQYSGIQVSGNIESLITAMWRHFQAGTVERLFDPNLNLQNHYNKKVKDEVKRVVHIGLLCIQEIPSLRPTMSKVLRMLTMEEEHLPPPTKPPFTDEMTMELDDSCKYSRCYSNTEGSSTATVGHSSFHPR 1365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27634786 27641236 + CaPI482276_08g022490.1 Cam08g2249 134300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2249 1365 FunFam Cysteine-rich receptor-like protein kinase 2 745 846 - -
Cam08g2249 1365 FunFam Cysteine-rich receptor-like protein kinase 2 1114 1321 - -
Cam08g2249 1365 SUPERFAMILY Protein kinase-like (PK-like) 365 674 IPR011009 -
Cam08g2249 1365 Gene3D Phosphorylase Kinase; domain 1 998 1113 - -
Cam08g2249 1365 Gene3D Phosphorylase Kinase; domain 1 340 455 - -
Cam08g2249 1365 SMART serkin_6 380 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 SMART serkin_6 1038 1315 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524(InterPro)
Cam08g2249 1365 ProSiteProfiles Gnk2-homologous domain profile. 745 846 IPR002902 -
Cam08g2249 1365 ProSiteProfiles Protein kinase domain profile. 380 669 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 225 684 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam08g2249 1365 FunFam Putative DUF26-domain receptor-like protein kinase family protein 1008 1113 - -
Cam08g2249 1365 CDD STKc_IRAK 386 655 - -
Cam08g2249 1365 FunFam Cysteine-rich receptor-like protein kinase 3 199 300 - -
Cam08g2249 1365 ProSiteProfiles Protein kinase domain profile. 1038 1315 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 FunFam Putative DUF26-domain receptor-like protein kinase family protein 349 455 - -
Cam08g2249 1365 Gene3D Transferase(Phosphotransferase) domain 1 456 665 - -
Cam08g2249 1365 Gene3D Transferase(Phosphotransferase) domain 1 1114 1321 - -
Cam08g2249 1365 ProSiteProfiles Gnk2-homologous domain profile. 850 957 IPR002902 -
Cam08g2249 1365 ProSiteProfiles Gnk2-homologous domain profile. 89 190 IPR002902 -
Cam08g2249 1365 CDD STKc_IRAK 1044 1314 - -
Cam08g2249 1365 FunFam Cysteine-rich receptor-like protein kinase 2 456 661 - -
Cam08g2249 1365 FunFam Cysteine-rich receptor-like protein kinase 3 855 957 - -
Cam08g2249 1365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1159 1171 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 ProSiteProfiles Gnk2-homologous domain profile. 195 300 IPR002902 -
Cam08g2249 1365 ProSitePatterns Protein kinases ATP-binding region signature. 1044 1066 IPR017441 GO:0005524(InterPro)
Cam08g2249 1365 Pfam Salt stress response/antifungal 103 188 IPR002902 -
Cam08g2249 1365 Pfam Salt stress response/antifungal 759 844 IPR002902 -
Cam08g2249 1365 Pfam Salt stress response/antifungal 203 297 IPR002902 -
Cam08g2249 1365 Pfam Salt stress response/antifungal 859 954 IPR002902 -
Cam08g2249 1365 Gene3D - 856 957 IPR038408 -
Cam08g2249 1365 Gene3D - 89 190 IPR038408 -
Cam08g2249 1365 Gene3D - 199 300 IPR038408 -
Cam08g2249 1365 Gene3D - 746 846 IPR038408 -
Cam08g2249 1365 SUPERFAMILY Protein kinase-like (PK-like) 1022 1339 IPR011009 -
Cam08g2249 1365 Pfam Protein kinase domain 1039 1311 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 Pfam Protein kinase domain 382 652 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam08g2249 1365 FunFam Cysteine-rich receptor-like protein kinase 2 89 190 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g2249 Cam-Chr8:27634786 Cam10g1281 Cam-Chr10:26241173 1.20E-132 dispersed
Cam06g0237 Cam-Chr6:4135466 Cam08g2249 Cam-Chr8:27634786 7.00E-24 transposed
Cam05g2747 Cam-Chr5:34734828 Cam08g2249 Cam-Chr8:27634786 1.50E-130 wgd
Cam06g1867 Cam-Chr6:29723566 Cam08g2249 Cam-Chr8:27634786 6.40E-52 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85402 PF00069 Pkinase 5.50E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2249 - - - 0.0