Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam08g2252 ATGCGCTCCACTTCTCAATTCCCTCCCAAATCCTTCCTTTCATCTGACAATCCCATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTTTCTTCGGATCCCATGACTTGGTTTCCACTACTTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCAGTAAATTTAAGATATGCGCAGAATTTACACAACTTTCACCTCCCCCTCTGTCATCTATAAATGCCTGGAAGGCCCTCCTCCTCCTCCTAGTGCATGCTCGTTTGGTTGAATTAGTCACACGTAACAACAGTGTGGCAGGTGGTGTAGATTGTTACCTTTGCTTTATATGCTGGACTGTATCAAACAGTTCCCTCATCTTATTGGACTAG 753 48.47 MRSTSQFPPKSFLSSDNPILPLHYHTLLSSTNFRDRIPFFGSHDLVSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSSKFKICAEFTQLSPPPLSSINAWKALLLLLVHARLVELVTRNNSVAGGVDCYLCFICWTVSNSSLILLD 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27655089 27657485 - CaPI482276_08g022520.1 Cam08g2252 134303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam08g2252 250 Pfam KNOX2 domain 126 172 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cam08g2252 250 SMART KNOX2_2 122 173 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cam08g2252 250 PANTHER FUSED COMPOUND LEAF 1 68 179 - -
Cam08g2252 250 Pfam KNOX1 domain 75 115 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cam08g2252 250 SMART KNOX1_2 72 116 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1854 Cam-Chr6:29610541 Cam08g2252 Cam-Chr8:27655089 3.70E-24 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam08g2252 - - - 0.0