Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0023 ATGGGGAAAGCTACCAGATGGTTGAAGGGTTTATTGGGGATCAAGAAAGAAAAAGACCCATCTGGGAATTCAAATTCAAATTCAAATTCAACCACCCTCGCCGCCGACAGAAAGGACAAGAAACGCTGGAGTTTTGCAAAGTCCGCTAGAGATTCCGGCCAAACGCCGCCTCCACCGCCGGACACTACTTGGTTCAGATCCTCCTACATTTCTGATTCAGAGAAAGAGCAGAACAAACACGCAATTGCTGTAGCTGCAGCCACCGCCGCCGCCGCAGACGCCGCCGTCGCTGCCGCGCAAGCGGCGGTGGCCGTCGTCCGCCTGACTAGCCAAGGAAGAGGGTCTCTTTATATCACTGGAAGAGATAGATGGGCTGCTGTGAAGATTCAAACAGTTTTTAGGGGCTATTTGGCAAGAAAGGCCCTGCGAGCTCTCAAAGGGCTTGTTAAATTGCAGGCTGTGGTTAGAGGATTTCTTGTGAGGAAAAGAGCTGCTGCTACTCTTCACAGTATGCAAGCTCTTTTTCGAGCTCAAACTGCAGTTAGAACTCAGAGAGCTCGTCGATCTTTCAACAAAGAGAACAGGTTTATCCCCGAGATTCGTCCCCGAAAATCTTCGGAACGCTTTGATGAAACAAGAAGTGAATTATTCCATAGTAAGAGGTTGTCTGTAGCATCATCTTATGACACAACCTGTATGAATTCATTGGATGAGAGTCCCAAAATTGTGGAAATCGACACCTACCGAACTCGATCGAGGTCTCGTAGGTACATTTCGACATTGTCTGAATGCGGAGGAGATGATGTAGCTTTCCAAGCAATCTCTTCATCGCCATTACCTTGTCCGAATCGACCTCGCGTCGTTGTGGATTGCCACAACAATGTGCTTCAAGACTTTGAATGGTGCTTGATGGGTGAGGACTGCAAGTTCCCTACAGCTCACAGCACGCCCCGGCTATCGAATAACTCGTTCGTCTCTGCCAACGTGCCAGTCACCCCATCCAAGAGCGTGTGCGGGGACAGCTTCTTTAGGCCATACATGAACTACTGCCCCAATTATATGGCGAACACACAATCTTTCAAGGCAAAACTGAGGTCTCAAAGTGCCCCAAAGCAAAGGCCAGAGCCAGGGTCCAAGAAGAAGCTATCATTGAATGAAATAATGGCAGCAAGAAACAGCTTGAGCAGTGTAAGAATGCGAAGACCAAATAACCAAATGCTGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGAAGAAGAAGAAGAAACATCATATGGTTTTTGA 1311 47.44 MGKATRWLKGLLGIKKEKDPSGNSNSNSNSTTLAADRKDKKRWSFAKSARDSGQTPPPPPDTTWFRSSYISDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGSLYITGRDRWAAVKIQTVFRGYLARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTAVRTQRARRSFNKENRFIPEIRPRKSSERFDETRSELFHSKRLSVASSYDTTCMNSLDESPKIVEIDTYRTRSRSRRYISTLSECGGDDVAFQAISSSPLPCPNRPRVVVDCHNNVLQDFEWCLMGEDCKFPTAHSTPRLSNNSFVSANVPVTPSKSVCGDSFFRPYMNYCPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEIMAARNSLSSVRMRRPNNQMLQEEEEEEEEEEEDDDDDDDEEEEETSYGF 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1193365 1195155 + CaPI482276_09g000230.1 Cam09g0023 134352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0023 436 MobiDBLite consensus disorder prediction 1 63 - -
Cam09g0023 436 Gene3D - 75 148 - -
Cam09g0023 436 MobiDBLite consensus disorder prediction 19 33 - -
Cam09g0023 436 ProSiteProfiles IQ motif profile. 122 150 - -
Cam09g0023 436 MobiDBLite consensus disorder prediction 408 436 - -
Cam09g0023 436 Pfam IQ calmodulin-binding motif 123 143 IPR000048 GO:0005515(InterPro)
Cam09g0023 436 Pfam IQ calmodulin-binding motif 149 163 IPR000048 GO:0005515(InterPro)
Cam09g0023 436 MobiDBLite consensus disorder prediction 362 436 - -
Cam09g0023 436 PANTHER IQ-DOMAIN 5-RELATED 6 385 - -
Cam09g0023 436 ProSiteProfiles IQ motif profile. 146 173 - -
Cam09g0023 436 MobiDBLite consensus disorder prediction 388 403 - -
Cam09g0023 436 SMART iq_5 144 165 IPR000048 GO:0005515(InterPro)
Cam09g0023 436 SMART iq_5 121 143 IPR000048 GO:0005515(InterPro)
Cam09g0023 436 Coils Coil 404 427 - -
Cam09g0023 436 Pfam Protein of unknown function (DUF4005) 314 399 IPR025064 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1624 Cam-Chr3:31233212 Cam09g0023 Cam-Chr9:1193365 1.80E-56 dispersed
Cam09g0023 Cam-Chr9:1193365 Cam09g2081 Cam-Chr9:35375784 6.80E-10 dispersed
Cam07g1230 Cam-Chr7:26639794 Cam09g0023 Cam-Chr9:1193365 4.90E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0023 - - - 0.0