Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0032 ATGGATGTTTCAACATATTTGCTCTCTGCTTTTCTGAGTGGCCTAGCTCTTCTCAATCTTGTTCAAGCTCAAGGTCAATTAGGCTTCATAAGCTTAGATTGTGGATTGCCACCAAACACAAACTACATTGAACCAACAACAACACTTCAATTTACTTCTGATGCTGCTTATATAAACAGTGGTGAAAGCAAAAGCTTATCCTCTAATTATAACGAATATCTACAACGACAATATCTTCATGTTAGAAGCTTTACCCAAGGACGTAGGAATTGCTACAATCTAAGTGTAAAAAGGGATACAAAATATTTGATGCGAGCAAGTTTTTTCTATGGAAATTACGATGGGCTCAGCCAACTGCCGAAATTCGATCTCTATTTTGGAGATAGCTTATGGAAGACAGTGAATTTTACTGATGAAAACACATATACCACAATAGATTCCATACATGTAACCTCAGACAATCAAGTACAAATTTGTCTCGTCAACACAAACACTGGAACTCCATTCATCTCTTCATTGGAATTCAGACCTTTGCCAAATGAGACTTATAAGTTCTTGACAAGATCGTTGTTGCTTTACTACCGATTAGATATGGGTACAACAACGAACGAAACATACAGGTTTCCTGGTGATATATATGATCGATTTTGGACGCCTTTCAATTGGTACGAGTGGACAAGCATAAGTACCACACTTAAGATAGATTCAGCTGATAATAATTACTACCAGCCAGGATCTGCTGTCATGGGAACTGCAGCTATTAGAATAGATACAAAAAAGCCTATGGAAATTTGGTGGGAGCCTGAAGATGAAAACACCCAGTATTATGTATACATGCACTTTGCTGAAGTTGAAAATCTCCAAGCCAATCAATCCAGAGGATTCAACGTCACTTATAATGGGAGTTTTTGGTATGGTCCTCTCATTCCCAACTACTTGTCAACAATAACGCTCTACAATCGAGGGCCATTACCAACACCAAATAAAAAGCATCTGTTCTCATTTATACAAATTGAAAATTCAACACGCCCTCCAATCATAAATGCTATGGAAATTTATTCTGTAATAGATCTATCAGAGCTAACGTCAGATCAAGGAGATGTGGATGCAATAACAAGCATCAAGTCAACTTACGGAATAGTCAGAGATTGGGAAGGAGATCCATGTGTTCCAAGAGCATACCCTTGGGAGGGTATAGATTGTACCAAAACAAATGGAACTGCTCCTAGAATCGTGTCTTTGAATTTGTCATCAAGTGGATTGACAGGAGAGATTTCTCAAAGTATAGAGAATCTACAAATGATACAAATATTGGACTTGTCAAACAATGGCTTGACGGGAACTATCCCTGATTTTCTGTCTAACTTGTCAAACCTTGAAGTCTTAAAGTTAGACAACAACAAGCTTTCAGGCTCTATTCCATCTGAACTCGTTAAGAGACTCAATAATGGTTCATTAACGTTAAGTGTTCAAGGGAATCCAAATCTAGATTGCATATCAAATTCGTGCAAGAGTAAGAAGACTAGTGTCGTTATTCCAATTGTAGCATCAATTGGCGGAGTGGTAGTCATCATTGTAGTTTCAATCATCATCCTTTGGATTGTTAAATCAAGGAAGAAACGAAAAAATGAAACCGTTGTTCCAAAGGTGGATCCCTCAGGAAGCAATGACCAAATAAGTGATCAGTTGTTGGAGACAAGGAGGCGGCAGTTCACATATTCAGAAGTCTTGAGGATGACCAACAATTTCGAGAGAATCCTAGGAAAAGGAGGTTTCGGGATGGTTTATTATGGCACCATAAATGACACTCAAGTGGCTGTGAAGATGCTATCTCAAGCTTCAGGTCAAGGTTATCAACAGTTTCAAGCAGAGGTTACACTTCTTTTGAGAGTTCACCACAAAAACTTGACAAGTCTTGTGGGGTATTTGAATGAAGGAGACCGCCTTGGGCTCATTTATGAGTTCATGGCCAAAGGAAACTTAGCAGAGCATCTTTCAGAAACGAGTTCCTATGTCTTAAGTTGGCAAGATAGGCTCCGGATAGCCATGGATGCAGCACAAGGATTGGAGTACCTACACGATGGTTGCAAGCCACCCATAATCCATAGAGATGTGAAAACAACAAACATCTTATTGACAGAGAATTTCCAAGCCAAACTTGCAGATTTTGGTTTATCCAAAAGCTTCCCAGTAGATGGCAACAAAACTAACAACTACATGTCCACCATTGTTGCTGGAACCCCTGGTTACCTTGATCCAGACTACTACTTATCGAACAGGCTGACGGAGAAAAGCGATGTGTACAGCTTTGGAGTGGTTCTGTTGGAGATAATCAGCTGCAGACCTGTGATATCAAGAAGCGAAGAAAATGGTCATATCAGTAAATGGGTAAACTCGATGGTGGCTCAAGGGGACATAAATGGAATAGTTGATGAAAGATTGAGAGGAAAATATGATGGTAACTCAGTTTGGAAGGCAGTGGAGGTGGCGTTGAGTTGTGTATCTGTGAACTCTGGAAAAAGACCGACGATGAACCACGTGGTGGCGGAACTGAAGAGTTGTCTGGCCATGGAATTGGAACGGACGCCGGAGAGTCAAGGTTTCGATTCGACGAATTCCGTTAACATGATGTCCATTGTTATGGATTACAGTGAATCCGCACCAATGGCGAGGATTGGAGTACCTGCACGATGGTTGCAAACCGCCCATAATCCACAGAGATGTGAAAACAACAATGCAGATTTTGGTTTATCCAAAAGCTTTCAAACAGGAGGCAACGACACCCATATGTCCACCATTGTTGCTGGCACTATTGGTTACCTTGATCCAGAGTACTATAAATCAAACAGGTTGACTGAGAAAAGTGATGTGTATAGCTTTGGGGTTGCTCTGTTGGAGATAATCAGCTGCAAACCTGTAAGACCACTAACTGACACGGATATTCATATCATCAAATGGGTAAACTCCCTGCCTGTTCGAGGGGATATTAACGGCATAATTGACCGAAGATTGAATGGAAATTATGATGTGAACTCAGTTTGGAAGGCAGTGGAAATAGCGATGAATTGTGTATCCAAGAAGCCTACAAGAAGACCGACAATGAACCAAGTGGTGGCAGAACTAAAGAATTGCTTAGCAATGGAATTGGAACGGATGCCGGAGAACGAAGCTTCCAATTCCATGTCCATTGTTATGGATTACAGTGTATCCCGTCCAATGGCAAGCTTATGGGAGACAATAAGCTTCACTGAAGTTGGCAAAGATGTTCTCAAAGATCTCATACATGTTACCTCCTCAAATGAAGTTCACATCTGTCTGATCAACACAGGAAATGGGGTGCCATTTATCTCAGCCTTAGAATTTAGACCTTTACTCAACGTCACTTATCAAACAGCCTCAGGATCTTTATCACTGTATTCTCGAATGGATATTGGTTCAACCGAAAATCGAACATACAGGTTCCCTTTTGATGTTTATGATCGCACCTGGGCACCATTTAACTTCAATGCGTGGACACAAGTGAGCACCAATCAAACTGTGGATGCAACTGATCACAACAATCACCAACCGCCATCAGTTGTCATGAAAACTGCCTCCGCCGCAAAAAATGCGAGCAACCCACTGGAAATTTGGTGGGATACAGAAGATTCATCTCGATATTATGTATTTCTCCACTTTGCTGAAGTTGTAGAGCTTCAAGGCAACCAGAGTAGAGGATTCAATATCATGCACAATGAGGATCTTTTTCATGGACCTCTAATTCCAACTTATTTATCTACACAAACCATTTTTCACCACAAACCATTGGATGAAGCAGATAGACATACATTTTCTTTAATTCCAATAGAGAATGCAACACTTCCTCCAATCTTTAATGCTTTCGAGATATATTCAGTGAAAGATATATCAGAGTTAGAGGCAGACAAAGGAGACGTGGATGCAATTACCAATATCAAGTCAACCTATGGGGTAAAGAAGGATTGGCAAGGAGATCCATGCGTGCCAATGGGATATCCCTGGAGTGGATTAAATTGTAGCAATGAAGCTGCACCAAGAATCATTTCCTTGAACTTATCTGCAAGTAGACTGAAAGGTGAAATATCTTCTTACATATCCAGTCTAACCATGTTGCAAACTTTGGACTTGTCAAACAATAATTTGACAGGGCAAGTGCCTGATTTCCTGTCTAGTTTGTCAGACCTCAAAACTCTGAACCTAGGCAACAACAAGCTCTCAGGTCCAATTCCGGCTGAGCTTTTGAAAAGATCCAATGATGGCTCACTATCATTAAGTGTGGGAGGTAACCAAAATCTCGATGGATGTACATCAGATCCATGTCCAAAGAATGAGAAGAAGAAGAACAACATCATCATTCCAATTGTAGCATCAATTGGTGGATTCCTAGTTGTCGTTACAATTGCTGCAGTAACCTTTTGGATCATCAAATCTCGAAAGAAACAAGAAGGTAAAAATGTTGTCTCAGTGGTGGATAAGTCAGAAACAAACAGTCAATTTGGTAATTCATTGGAGGTGAGAAGGCGTCAATTTACATATTCTGAGGTGGTGAAAATGACAAACAATTTCAGTAAAGTTTTGGGTAAAGGAGGTTTCGGGAAGGTCTATTATGGTGTCATTGACGAAATTCAAGTGGCAGTGAAGATGTTGTCTTTATCATCACCACAAGGATATCGGCAATTTCAAGCAGAGGTTACCCATCTTATGAGAGTTCACCACAGAAACTTGACCAGCCTCGTTGGATATTTGAATGAAGGAGATCACCTTGGCCTAATTTACGAGTACATGGCCAATGGAGATTTGGCCAAACACCTTTCAGAGAAGAGTGTACATATCCTAAGCTGGGAAAACAGACTTCGAATAGCAATGGATGCAGCTCAAGGATTGGAGTACTTGCATTATGGTTGTAAGCCACCCATAGTTCACAGAGATGTGAAAACAACAAACATCTTATTGACAGATAATTTCCAAGGCAAACTTGCAGATTTTGGTCTTTCCAAAAGCTTCCCCAGAGATGGCAACACCCACATGTCCACGGTTGTTGCTGGCACTCCTGGTTACCTTGATCCAGAGTACTACGTATCAAACAGGCTAACAGAGAAAAGCGATGTATACAGCTTTGGGATAGCTCTATTGGAGATAATCAGTTGCAAACCAGTAATATCAAGAACCGGAGATACACCACATATAGCTAAATGGGTTACCTCTTTGCTGGCGCGAGGAGATATCCAGAGTATAGTTGATCCCAGATTAGAAGGGCAATGTGAAACAAACTCTGTTTGGAAGACGGTGGAAGTGGCAATGGCTTGTGTAGCGGCAAATTCCAGTAGAAGGCCGACGATGAGCGACATTGTGGCGGAACTTAAAGATTGTTTAGCTACGGAATTGAGCCGAAAGCTTGAGAATCGTTCGCTTGATTCGACAAATTCCATTGAAATGAGGTCCATCTCTGTAGGATTTAATGCTTCCGATTCAAATCCCATGGCGAGGTGA 5508 40.89 MDVSTYLLSAFLSGLALLNLVQAQGQLGFISLDCGLPPNTNYIEPTTTLQFTSDAAYINSGESKSLSSNYNEYLQRQYLHVRSFTQGRRNCYNLSVKRDTKYLMRASFFYGNYDGLSQLPKFDLYFGDSLWKTVNFTDENTYTTIDSIHVTSDNQVQICLVNTNTGTPFISSLEFRPLPNETYKFLTRSLLLYYRLDMGTTTNETYRFPGDIYDRFWTPFNWYEWTSISTTLKIDSADNNYYQPGSAVMGTAAIRIDTKKPMEIWWEPEDENTQYYVYMHFAEVENLQANQSRGFNVTYNGSFWYGPLIPNYLSTITLYNRGPLPTPNKKHLFSFIQIENSTRPPIINAMEIYSVIDLSELTSDQGDVDAITSIKSTYGIVRDWEGDPCVPRAYPWEGIDCTKTNGTAPRIVSLNLSSSGLTGEISQSIENLQMIQILDLSNNGLTGTIPDFLSNLSNLEVLKLDNNKLSGSIPSELVKRLNNGSLTLSVQGNPNLDCISNSCKSKKTSVVIPIVASIGGVVVIIVVSIIILWIVKSRKKRKNETVVPKVDPSGSNDQISDQLLETRRRQFTYSEVLRMTNNFERILGKGGFGMVYYGTINDTQVAVKMLSQASGQGYQQFQAEVTLLLRVHHKNLTSLVGYLNEGDRLGLIYEFMAKGNLAEHLSETSSYVLSWQDRLRIAMDAAQGLEYLHDGCKPPIIHRDVKTTNILLTENFQAKLADFGLSKSFPVDGNKTNNYMSTIVAGTPGYLDPDYYLSNRLTEKSDVYSFGVVLLEIISCRPVISRSEENGHISKWVNSMVAQGDINGIVDERLRGKYDGNSVWKAVEVALSCVSVNSGKRPTMNHVVAELKSCLAMELERTPESQGFDSTNSVNMMSIVMDYSESAPMARIGVPARWLQTAHNPQRCENNNADFGLSKSFQTGGNDTHMSTIVAGTIGYLDPEYYKSNRLTEKSDVYSFGVALLEIISCKPVRPLTDTDIHIIKWVNSLPVRGDINGIIDRRLNGNYDVNSVWKAVEIAMNCVSKKPTRRPTMNQVVAELKNCLAMELERMPENEASNSMSIVMDYSVSRPMASLWETISFTEVGKDVLKDLIHVTSSNEVHICLINTGNGVPFISALEFRPLLNVTYQTASGSLSLYSRMDIGSTENRTYRFPFDVYDRTWAPFNFNAWTQVSTNQTVDATDHNNHQPPSVVMKTASAAKNASNPLEIWWDTEDSSRYYVFLHFAEVVELQGNQSRGFNIMHNEDLFHGPLIPTYLSTQTIFHHKPLDEADRHTFSLIPIENATLPPIFNAFEIYSVKDISELEADKGDVDAITNIKSTYGVKKDWQGDPCVPMGYPWSGLNCSNEAAPRIISLNLSASRLKGEISSYISSLTMLQTLDLSNNNLTGQVPDFLSSLSDLKTLNLGNNKLSGPIPAELLKRSNDGSLSLSVGGNQNLDGCTSDPCPKNEKKKNNIIIPIVASIGGFLVVVTIAAVTFWIIKSRKKQEGKNVVSVVDKSETNSQFGNSLEVRRRQFTYSEVVKMTNNFSKVLGKGGFGKVYYGVIDEIQVAVKMLSLSSPQGYRQFQAEVTHLMRVHHRNLTSLVGYLNEGDHLGLIYEYMANGDLAKHLSEKSVHILSWENRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTDNFQGKLADFGLSKSFPRDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALLEIISCKPVISRTGDTPHIAKWVTSLLARGDIQSIVDPRLEGQCETNSVWKTVEVAMACVAANSSRRPTMSDIVAELKDCLATELSRKLENRSLDSTNSIEMRSISVGFNASDSNPMAR 1835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1262582 1278158 + CaPI482276_09g000320.1 Cam09g0032 134361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0032 1835 Gene3D Ribonuclease Inhibitor 1312 1431 IPR032675 -
Cam09g0032 1835 Gene3D Ribonuclease Inhibitor 368 497 IPR032675 -
Cam09g0032 1835 SUPERFAMILY Protein kinase-like (PK-like) 1505 1793 IPR011009 -
Cam09g0032 1835 Gene3D Phosphorylase Kinase; domain 1 1513 1600 - -
Cam09g0032 1835 SUPERFAMILY Protein kinase-like (PK-like) 913 1075 IPR011009 -
Cam09g0032 1835 Gene3D Transferase(Phosphotransferase) domain 1 907 1068 - -
Cam09g0032 1835 Gene3D Transferase(Phosphotransferase) domain 1 1601 1818 - -
Cam09g0032 1835 Gene3D Transferase(Phosphotransferase) domain 1 656 874 - -
Cam09g0032 1835 Pfam Protein tyrosine and serine/threonine kinase 1528 1793 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 Pfam Protein tyrosine and serine/threonine kinase 583 851 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 FunFam Leucine-rich repeat receptor-like protein kinase 1499 1600 - -
Cam09g0032 1835 CDD STKc_IRAK 587 852 - -
Cam09g0032 1835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1645 1657 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 ProSiteProfiles Protein kinase domain profile. 1526 1797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 ProSiteProfiles Leucine-rich repeat profile. 1376 1398 IPR001611 GO:0005515(InterPro)
Cam09g0032 1835 SMART LRR_typ_2 456 480 IPR003591 -
Cam09g0032 1835 SMART LRR_typ_2 1398 1422 IPR003591 -
Cam09g0032 1835 SMART LRR_typ_2 432 455 IPR003591 -
Cam09g0032 1835 SMART LRR_typ_2 1374 1397 IPR003591 -
Cam09g0032 1835 FunFam Leucine-rich repeat receptor-like protein kinase 558 655 - -
Cam09g0032 1835 PRINTS Leucine-rich repeat signature 1377 1390 - -
Cam09g0032 1835 PRINTS Leucine-rich repeat signature 1398 1411 - -
Cam09g0032 1835 SUPERFAMILY L domain-like 394 482 - -
Cam09g0032 1835 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 1601 1806 - -
Cam09g0032 1835 FunFam Leucine-rich repeat receptor-like kinase 367 499 - -
Cam09g0032 1835 SUPERFAMILY Protein kinase-like (PK-like) 557 851 IPR011009 -
Cam09g0032 1835 Pfam Protein kinase domain 913 1039 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 Pfam Leucine Rich Repeat 458 477 IPR001611 GO:0005515(InterPro)
Cam09g0032 1835 Pfam Leucine Rich Repeat 435 456 IPR001611 GO:0005515(InterPro)
Cam09g0032 1835 Gene3D Phosphorylase Kinase; domain 1 563 655 - -
Cam09g0032 1835 ProSitePatterns Protein kinases ATP-binding region signature. 587 608 IPR017441 GO:0005524(InterPro)
Cam09g0032 1835 ProSitePatterns Protein kinases ATP-binding region signature. 1532 1553 IPR017441 GO:0005524(InterPro)
Cam09g0032 1835 Pfam Malectin-like domain 1074 1299 IPR024788 -
Cam09g0032 1835 Pfam Malectin-like domain 32 355 IPR024788 -
Cam09g0032 1835 PANTHER OS07G0107800 PROTEIN-RELATED 21 859 - -
Cam09g0032 1835 Pfam Leucine Rich repeats (2 copies) 1376 1412 IPR025875 -
Cam09g0032 1835 SMART serkin_6 1526 1797 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 SMART serkin_6 581 855 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 656 863 - -
Cam09g0032 1835 ProSiteProfiles Protein kinase domain profile. 581 855 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0032 1835 SUPERFAMILY L domain-like 1336 1424 - -
Cam09g0032 1835 FunFam Leucine-rich repeat receptor-like kinase 1310 1440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1218 Cam-Chr7:26550385 Cam09g0032 Cam-Chr9:1262582 1.00E-214 dispersed
Cam07g1219 Cam-Chr7:26560544 Cam09g0032 Cam-Chr9:1262582 3.70E-21 dispersed
Cam09g0029 Cam-Chr9:1226807 Cam09g0032 Cam-Chr9:1262582 2.90E-223 dispersed
Cam09g0030 Cam-Chr9:1240295 Cam09g0032 Cam-Chr9:1262582 8.20E-125 dispersed
Cam09g0032 Cam-Chr9:1262582 Cam09g0034 Cam-Chr9:1303745 7.00E-181 dispersed
Cam09g0032 Cam-Chr9:1262582 Cam09g0033 Cam-Chr9:1280932 1.00E-171 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85407 PF12819 Malectin_like 9.10E-109 CL0202 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0032 - - - 0.0