Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0033 ATGGTGCACACAACTTCAATAGATAAATTGCCAATCTGTCTTATCAACATTGGCTATGGAATACCATTCATCTCAACATTAGAGTTTAGAGAGCTTCCTTATCTCATTTACTATGCTCTATCAGTTTCCTTGCGCCTTTACCATCGGTACGATATGGGGTCAATAACAAATGAGCAATACAGCTCTGATCCAGTCCCTAGAATCACATCACTGAACTTGTCTTCAAGCGAATTGAAGGGTGAGATATCTCCGCACATAATCAGTCTACCAATGTTACAAACATTGGATTTGTCAAACAATTACTTGACAGGAGAAGTACCTAGATTTCTGTCCCAGTTGGAACACCTCAAAATCCTAAACTTAGAGAATAACAATCTCACAGGCTCTCTTCCACCAGAGCTTATCAAAAAACAGAAGAACCGTTCACTTACATTAAGAGGAAATCTGGCCGAGCATCTTTCTGAGAAAAGCTCAAGTATCTTAAGCTGGGAAAACAGACTTCGGATTGCAATAGATGCAGCTCAAGGGCTGGAGTATCTGCATCATGGTTGTAAGCCACCAATAGTCCACAGGGATGTGAAAACAACAAACATCTTATTGACAGAAAAATTCAACGCCAAACTTTCTGATTTTGGTCTTTCCAAGACTTATCCAACAGATGACAAGTCCTACATGAGCACTGTTATTGTTGGCACTCCCGGTTACCTTGATCCAGAGTACTTTACATCAAACAGGCTAACTGAAAAAAGCGATGTGTATGGTTTTGGAGTTTCCTTGATGGAAGTAATTAGTTGCAGACCAGTAATTTCAAACATCCAAGACCCGGAAACGAATTACATAGCCAAATGGCTTCGTACCATGGTTGCTCAGGGAGATATCAAGAACATAGTCGACCCAAGGTTAAAAGAAGCATATGAATGTAACTCTGTTTGGAAAGCTGTAAAAGTAGCATTGGCTTGCGTATCAGAAAACTCCAGTCAAAGGCCAACGATGAATCAAGTGGTGATAGAGCTGAAGGATTGCTTGGGCATGGAGTTGAATCAGAGATCTAAAAGTGATTTTAGAAATATAGCAGACCAAAGATTAAAAGGAGAACATAGCATAAACTCTGTCCGAAAAGTAGTGGAAGTAGAAATGGCTTGTGTATCAGTGAATTCTGAGAGAAGGGCAACAACAAATCAAGTAGTGGCAGAATTGAAAAGTTGGTTGGCTATAGAATTGAGTATAACGTCTGACGGTCAGCCTCCTGACTCAACAGAGTCCATTGAGATGGCATCCATCTACATGGCTTTGCCTCCTCAATCAAGTCCCATGGCGAGGAACTTGTCATCGACCAGTTTGACAGGCCTTATATCAAATGATATATCTGATCTAACTGCCTTGCAAATTTTGGACTTGTCAAACAATAGCTTAACAGGAAAAGTGCCCGATTTTTCCAAATTGTTATACCTCAAAGTCCTAAATTTGGAGAACAACAATTTCTCATGTCCAATTCCACCTGAACTCGTGGTATCGAGTTTGCAAAATGCAGGACTTGAATACCTGCATGATGGTTGTAAGCCACCAATTATCCACGGAAATGTGAAACCAACAAACATCTTGTTGACTAAAAAATTCCAAGCTAAACTTTCTGACTTCGGTGTTTCCAAGAGCTACTCAACAAATGATAATACCGGTTATCTTGACCCAGAGTACAAAACATCAAACAGGTTGAGTTCGAAAAGTGATGTGTACAGCTTCGGCCTTACACTGTTAGAGATAGTGTGTTGCAAACCAGTGATATCGAAATCTCAAGGCCATGATTCAATTCATATAATTAAATGGGTTGGCTCCATGGTTGCTCAAGGTGATTTCAGAAACATAGCAGACGAAAGATTAAAAGGAAAATATAACATAACCTCCGTCCGAAAAGCGGTGGAAGTAGCAATGGCTTGTGTGTCAGTGAATTCTGAGAGAAGGCCAACAATGAATCAAGTGGTGGCAGAACTGAAAAGTTGCTTAGCTATAGAACTAAGTCGAACACCAGAGAATCAAGATCCTTATTCAACAGAATCCACGGAAATGACATCAATCTACATGGTTTTGCCTCCTCAAACGGGTCCCATGGCGAGGGACTTGTCAAACAATGGCTTAACAGGAAAACTGCCTGATTCTCTGTCCAAATTGTCAAACCTCAAAGTCTTTTTACAAAATGCAGGACTAGAATATCTGCATGCTGGTTGTAAGCCACTAATAGTCCATGGAGATGTGAAACCAGCAAACATCTTGTTAACTGAAAATTTCCAAGCTAAACTTTCTGATTTCGGTCTTTCCAAGAGCTACCCAACAAATGATAAAACTAGTTACCTTGACCCAGAGTACAAAACATCAAACAGGCTAAGTCCAAAAAGTGATGTGTATAGCTTTGGCATCGCTCTGTTGGAGATAGTGAGTTGCAGACCGGTGATATCAAAATCCCAAGGCCACAGTTCGGTTCATATAGTTAAATGGGTTGGTTCCATGGTTGCACAAGGTGACATTCGAAATATAGCAGACCCAAGATTGAAAGAAGAATATAACATACACTCTGTTCGAAAAGCAGTGGAAGTAGCAATGGCTTGTGTATCAGTGAATTCTGAGAGAAGGCCAACAATAAGTCAACTGCTGGCAGAACTGAAAGGTTGCTTGGCCACAGAATTGAGCCGAGCACCGGATAGTCAGCCTCCTAATTCAACAGAGTCCATTGAAATGACATCCATCTACATGGTTTTGCCCCCTCAGTCAGGTCCCACGGCGAGAGACTTGTCAAATAATAGCTTATCAGGAAAAGTACCTGATTTCTTGGCCTATATGTCAAGCCTCAAAGTCATAAAATTAGACAAAAACAACCTCACGGGTCCACTTCCACCTGAACTTCTAAAAAAAGTGAATAATGGTTCACTAAAATTAAGTCAAATCTCGAAAAATACAGGACTGGAGTACCTGCATCATGGTTGTAAGCCACCCATAGTCCACAGAGATGTCAAAACAACAAACATATTGCTAACAGACAATTTCCAAGCCAAACTTGCTGATTTCGGACTCTCCAAAAGTTTCCCAAATGATGGTAGCAAGACTCACATGTCCACAATGGTGGCTGGCACTCCTGGTTACTTTGATCCAGAATACTACACCTCGAACAGACTGACTGAGAAAAGTGATGTTTATAGCTTCGGAGTAGTATTGTTGGAGATAATTACTTGCAGACCAGTGATTTCCAGAGCTCAGGAAAACGTTCACATAATTCAATGGGCGACCACCATGATTGCGCGAGGGGACATCAGGAACGTGATCGACTCAAGATTAAAAGGGGAATTCAACTCCAACTCTGCTCGGAAATCGGTGGAAATAGCAATGGCTTGCGTGTCTTCAAATTCAAGCAGTAGGCCGACAATGAACCAGGTAGTAACAGAACTGAAGAATTGCCTGGCCATGGAAATGAGTCGGAAGACAGAGAATCGCTCTCTTAATTCGAGGAATTCCAGTGAGACGTTCTCAATTTCCATTACTTTACCAACATCCAGCCCTGAGGCAAGATGA 3558 41.2 MVHTTSIDKLPICLINIGYGIPFISTLEFRELPYLIYYALSVSLRLYHRYDMGSITNEQYSSDPVPRITSLNLSSSELKGEISPHIISLPMLQTLDLSNNYLTGEVPRFLSQLEHLKILNLENNNLTGSLPPELIKKQKNRSLTLRGNLAEHLSEKSSSILSWENRLRIAIDAAQGLEYLHHGCKPPIVHRDVKTTNILLTEKFNAKLSDFGLSKTYPTDDKSYMSTVIVGTPGYLDPEYFTSNRLTEKSDVYGFGVSLMEVISCRPVISNIQDPETNYIAKWLRTMVAQGDIKNIVDPRLKEAYECNSVWKAVKVALACVSENSSQRPTMNQVVIELKDCLGMELNQRSKSDFRNIADQRLKGEHSINSVRKVVEVEMACVSVNSERRATTNQVVAELKSWLAIELSITSDGQPPDSTESIEMASIYMALPPQSSPMARNLSSTSLTGLISNDISDLTALQILDLSNNSLTGKVPDFSKLLYLKVLNLENNNFSCPIPPELVVSSLQNAGLEYLHDGCKPPIIHGNVKPTNILLTKKFQAKLSDFGVSKSYSTNDNTGYLDPEYKTSNRLSSKSDVYSFGLTLLEIVCCKPVISKSQGHDSIHIIKWVGSMVAQGDFRNIADERLKGKYNITSVRKAVEVAMACVSVNSERRPTMNQVVAELKSCLAIELSRTPENQDPYSTESTEMTSIYMVLPPQTGPMARDLSNNGLTGKLPDSLSKLSNLKVFLQNAGLEYLHAGCKPLIVHGDVKPANILLTENFQAKLSDFGLSKSYPTNDKTSYLDPEYKTSNRLSPKSDVYSFGIALLEIVSCRPVISKSQGHSSVHIVKWVGSMVAQGDIRNIADPRLKEEYNIHSVRKAVEVAMACVSVNSERRPTISQLLAELKGCLATELSRAPDSQPPNSTESIEMTSIYMVLPPQSGPTARDLSNNSLSGKVPDFLAYMSSLKVIKLDKNNLTGPLPPELLKKVNNGSLKLSQISKNTGLEYLHHGCKPPIVHRDVKTTNILLTDNFQAKLADFGLSKSFPNDGSKTHMSTMVAGTPGYFDPEYYTSNRLTEKSDVYSFGVVLLEIITCRPVISRAQENVHIIQWATTMIARGDIRNVIDSRLKGEFNSNSARKSVEIAMACVSSNSSSRPTMNQVVTELKNCLAMEMSRKTENRSLNSRNSSETFSISITLPTSSPEAR 1185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1280932 1302116 + CaPI482276_09g000330.1 Cam09g0033 134362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0033 1185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 996 1008 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 ProSiteProfiles Leucine-rich repeat profile. 460 482 IPR001611 GO:0005515(InterPro)
Cam09g0033 1185 ProSiteProfiles Protein kinase domain profile. 393 667 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 SUPERFAMILY L domain-like 43 163 - -
Cam09g0033 1185 Gene3D Ribonuclease Inhibitor 911 978 IPR032675 -
Cam09g0033 1185 Gene3D Ribonuclease Inhibitor 391 510 IPR032675 -
Cam09g0033 1185 Gene3D Ribonuclease Inhibitor 49 145 IPR032675 -
Cam09g0033 1185 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 Pfam Malectin-like domain 1 69 IPR024788 -
Cam09g0033 1185 ProSiteProfiles Protein kinase domain profile. 44 403 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 Gene3D Transferase(Phosphotransferase) domain 1 716 904 - -
Cam09g0033 1185 Gene3D Transferase(Phosphotransferase) domain 1 511 687 - -
Cam09g0033 1185 Gene3D Transferase(Phosphotransferase) domain 1 146 350 - -
Cam09g0033 1185 SUPERFAMILY Protein kinase-like (PK-like) 983 1145 IPR011009 -
Cam09g0033 1185 FunFam Lectin-domain containing receptor kinase A4.3 977 1162 - -
Cam09g0033 1185 Pfam Protein kinase domain 510 661 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 Pfam Protein kinase domain 983 1143 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 Pfam Protein kinase domain 732 883 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 Pfam Protein kinase domain 147 335 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 SUPERFAMILY Protein kinase-like (PK-like) 511 689 IPR011009 -
Cam09g0033 1185 ProSiteProfiles Protein kinase domain profile. 829 1149 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 PRINTS Leucine-rich repeat signature 458 471 - -
Cam09g0033 1185 PRINTS Leucine-rich repeat signature 92 105 - -
Cam09g0033 1185 Gene3D Transferase(Phosphotransferase) domain 1 979 1163 - -
Cam09g0033 1185 SUPERFAMILY Protein kinase-like (PK-like) 733 912 IPR011009 -
Cam09g0033 1185 SUPERFAMILY Protein kinase-like (PK-like) 146 336 IPR011009 -
Cam09g0033 1185 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 144 351 - -
Cam09g0033 1185 PANTHER OS07G0107800 PROTEIN-RELATED 65 145 - -
Cam09g0033 1185 SMART LRR_typ_2 458 480 IPR003591 -
Cam09g0033 1185 SMART LRR_typ_2 89 112 IPR003591 -
Cam09g0033 1185 SMART LRR_typ_2 944 968 IPR003591 -
Cam09g0033 1185 SMART LRR_typ_2 113 137 IPR003591 -
Cam09g0033 1185 Pfam Leucine rich repeat 66 126 IPR001611 GO:0005515(InterPro)
Cam09g0033 1185 SMART serkin_6 621 889 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0033 1185 Pfam Leucine Rich Repeat 705 722 IPR001611 GO:0005515(InterPro)
Cam09g0033 1185 Pfam Leucine Rich Repeat 461 477 IPR001611 GO:0005515(InterPro)
Cam09g0033 1185 Pfam Leucine Rich Repeat 484 502 IPR001611 GO:0005515(InterPro)
Cam09g0033 1185 SUPERFAMILY L domain-like 441 987 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0033 Cam-Chr9:1280932 Cam11g1697 Cam-Chr11:29658893 1.10E-59 dispersed
Cam09g0032 Cam-Chr9:1262582 Cam09g0033 Cam-Chr9:1280932 1.00E-171 tandem
Cam09g0033 Cam-Chr9:1280932 Cam09g0034 Cam-Chr9:1303745 1.10E-57 tandem
Cam11g1509 Cam-Chr11:27951395 Cam09g0033 Cam-Chr9:1280932 8.80E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85408 PF00069 Pkinase 9.10E-27 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0033 - - - 0.0