Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0060 ATGAAAACTGCAGAAATTTCCTTTGAAATTGGGACTCTGATGGGGTTTCGATTACTGTTTCTGCTGTTCCAAATTTATTTTGCTGTTAGCTCTTTCTCTGTCTGTGAAGCTGCAGTTATTCTCCCAGGCAGGCCGAGTGGATCGCGTTCTGCACTCCCAGACCATGCTGTCACTCCAACATCTCATGGCTTTGGCAGGAAACACCATGGCAATTTGGATAATGCAGCCCCTAGTAAACCATTTAAAAGTTCATCTCCTCAGATCCATTCTCATTATAAAGCCATTCAATCAGATGATTCAAGTAGAGCTCCTAGCATTGCACTTCCGCCCACCGCGCCTGTTAAGAAATGGGGGCACGAACATACACTCTCACCATTGATCTCTTTTCATAAATTTCGCCATTCAAGAAGGAAGTTCAGGAACAATGCTCCACAGCCTACTTATCATGCATTGCCCCCGACTAGCAGCCAGAAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGTTACCATCTGTAGCGAGAGGGAGGTCGCCCGGACCTGCACCATCACCAACAATTGAACCCAACCACTATTATATGCCCATTCCTGCACCTACAACTTCTCCTATGGGTTCTTACAAGAAGAAGAAGAGTATGCCACCATCACAAGTTATGATTCTACCACCTCCACCTCCTAATGGGGATTGTACAATAGCATGTACAGAGCCATTGACATATACGCCTCCCGGGACGCAATGTGGCTGCGTGTGGCCAATTCAAGTCAAAATCATTCTTGATGTTGCAGTATACACGTTTTTTCCTCTGGTTTCAGAACTTGCAGAGGAAATTGCTGACAGTATCAGTCTGAACCAAAGCCAAGTTCGAATTATGGGAGCCGATGCTGCTAGTCAGCAGTTAGAAAAAACGACTGTCCTCATCAACTTGGTTCCGAGAGGATCAAAATTCAATCATAACACAGCCTTTTTTATATATCAGAAATTTTGGCGGAGAAAGATATTCATCAACCCTTCTTTGTTTGGAAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCGTTGGCGCCTTCAGGTACGTCGTCTATTAATGATGGTTTGAACACTAGCAATACTAATGCTGGAAATGCAATTAAACCGTTGGGAGTTGACGTGCCAAGACGAAAAAAAGAAGGGCTTGGCAGAAACATGATCGCGGTGATTACTATATCATCGTTCACTGCCCTTGTCATGTGTGTTGGGTTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTACACATCAAACAGCACAAATTCCACAAAACTTGATAGCCTCACCTACAAAACCACCAGGCACTGCTGGATTGATAATGGTTGGAAGTGAACCTGGTTCTTCATCCATGCCTCTCGATGCCGATCCTATGACGTATATTGGAGCTGCAAAGAACTTCACCTTGAAAGATATGGAGAAAGCCACTGACAACTTCGATACTGCAAGAATATTAGGAGAAGGTGGTTTTGGAATTGTATACAGTGGCAGTTTAGACGATGGAAGAGAAGTGGCTGTGAAGGTTCTTAAACGACATAATCAACATGGTATTCGGGAATTCTTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAGTTGATTGGTATCTGCACAGAAGATCAGATTCGCTGCCTGGTATATGAATTGGTTCCTAATGGAAGTGTTGAATCACACTTACATGGCATTGACAAGTTAACCAGTCCACTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTAGCCTATCTGCATGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGTTGGAATATGACTTTACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACACATGTCATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACTGGCCACCTTCTTGTAAAGAGCGATGTCTATAGCTATGGTGTTGTCCTTCTCGAGCTGCTTACAGGAAGAAAGCCAGTAGACTTGTCACTTCCACCCGGACAAGAAAATCTTGTTGCTTGGGCTCGTCCGCTTCTCACGAGCAAGGAAGGATTAGATGCAATAACAGACCCAGCTATCAAGTCTGACATCTCCATTGATAGCTTGGCCAGAGTAGCAGCGATTGCTTCAATGTGTGTACAGCCAGAAGTATCTCACAGACCATTTATGGGTGAGGTTGTTCAAGCCCTGAAACTCGTTTGCAATGAATTTGAAGAAACTAACGATCCAGTTTCACGAAGTTACAGCCGAGACGAACTTCTAAGTTACATGGATAGTAAATTTGGAGGAATTTCCGGTGAAATACTAAACGCTCCTGAGACCTCACACACCTTTCCTTCAGGAAAAGAGAAGAATGTAGGATTATCGGCATCGGATTTGATCAGTGCATCTGCAAGATTTGAAGGACAGGAACTGGTTTCTTCTAGATGGCATTCATCAAACTCGGAACCATTAAGAACTGGAAGAAAAAAGCACTTATGGCAGAAGCTAAGAAGTTTCTCACGAGGCAGCTTCAGTGAACATGGCTTTTCTGCTAAGTTTTGGCCTGGATTTCGTTAG 2670 44.16 MKTAEISFEIGTLMGFRLLFLLFQIYFAVSSFSVCEAAVILPGRPSGSRSALPDHAVTPTSHGFGRKHHGNLDNAAPSKPFKSSSPQIHSHYKAIQSDDSSRAPSIALPPTAPVKKWGHEHTLSPLISFHKFRHSRRKFRNNAPQPTYHALPPTSSQKGPAAVSPIQSPLPSVARGRSPGPAPSPTIEPNHYYMPIPAPTTSPMGSYKKKKSMPPSQVMILPPPPPNGDCTIACTEPLTYTPPGTQCGCVWPIQVKIILDVAVYTFFPLVSELAEEIADSISLNQSQVRIMGADAASQQLEKTTVLINLVPRGSKFNHNTAFFIYQKFWRRKIFINPSLFGRYQVLNVKYPGLPPSPPLAPSGTSSINDGLNTSNTNAGNAIKPLGVDVPRRKKEGLGRNMIAVITISSFTALVMCVGFAWLCLLRCRVSTHQTAQIPQNLIASPTKPPGTAGLIMVGSEPGSSSMPLDADPMTYIGAAKNFTLKDMEKATDNFDTARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPNGSVESHLHGIDKLTSPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNDPVSRSYSRDELLSYMDSKFGGISGEILNAPETSHTFPSGKEKNVGLSASDLISASARFEGQELVSSRWHSSNSEPLRTGRKKHLWQKLRSFSRGSFSEHGFSAKFWPGFR 889
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1502068 1506377 - CaPI482276_09g000600.1 Cam09g0060 134389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0060 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0060 889 FunFam Receptor-like serine/threonine-protein kinase ALE2 570 787 - -
Cam09g0060 889 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524(InterPro)
Cam09g0060 889 Pfam Protein tyrosine and serine/threonine kinase 497 767 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0060 889 CDD STKc_IRAK 500 768 - -
Cam09g0060 889 MobiDBLite consensus disorder prediction 45 113 - -
Cam09g0060 889 Gene3D Transferase(Phosphotransferase) domain 1 570 789 - -
Cam09g0060 889 PANTHER OS01G0750732 PROTEIN 230 788 IPR050885 -
Cam09g0060 889 ProSiteProfiles Protein kinase domain profile. 494 775 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0060 889 FunFam receptor-like serine/threonine-protein kinase ALE2 468 569 - -
Cam09g0060 889 MobiDBLite consensus disorder prediction 77 104 - -
Cam09g0060 889 MobiDBLite consensus disorder prediction 147 163 - -
Cam09g0060 889 MobiDBLite consensus disorder prediction 176 192 - -
Cam09g0060 889 SUPERFAMILY Protein kinase-like (PK-like) 474 767 IPR011009 -
Cam09g0060 889 Gene3D Phosphorylase Kinase; domain 1 465 569 - -
Cam09g0060 889 MobiDBLite consensus disorder prediction 142 195 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g0148 Cam-Chr7:2621570 Cam09g0060 Cam-Chr9:1502068 1.20E-170 dispersed
Cam09g0060 Cam-Chr9:1502068 Cam10g1128 Cam-Chr10:24350236 7.40E-104 dispersed
Cam03g1572 Cam-Chr3:30707699 Cam09g0060 Cam-Chr9:1502068 1.30E-206 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85410 PF07714 PK_Tyr_Ser-Thr 6.30E-47 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0060 - - - 0.0