Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0101 ATGGGTTTCAAAAAGCTATTCTCTCTAAAATATTTGATACCCAGTTGTTTAAAGCCAAAGAAGCTGCTCACAGGCCCTTCTTCTGCTGGATTTCAAACCTCAAAAAAAATATCTCTTAGAAGAATCTTATCATTGTCTGATATGAGTGTTAGATCATCTTTATCAGTTATTAGTGATCTTTCAAACTCTTGTAATGGTTCAAATCTTCAAATTTTCACCTTTAAAGAACTTGAGGAAGTCACTGAAAACTTCACCAAAAGTAATTATTTGGGTGAAGGAGGATTTGGGCCTGTGTTTAAAGGGTTCATTGAAGACAATTTCAAGCCTGGTTTGAAATCACAGCAAGTGGCTGTGAAGATTTTGGATTTGGATGGCTCTCAAGGCCATAGAGAGTGGCTGGCTGAAGTGTTTTTTCTTGGGCAATTGAGACACCCAAATCTTGTTAATTTGATTGGATATTGTCTTGAAGATGAACAGAGGCTTCTTGTATATGAATATATGGAAGGAGGAAACTTGGAGAATCTGTTGTTTAAATGTTGTTATGTTTCAAATTTGACATGGTTACAAAGGATAAAAATTGCATTAGGATCAGCAAAAGGCCTTGCTTTCTTGCACGAAACCGAAAAACCGATCATTTTTCGAGATTTCAAGGCTTCGAACATCTTACTCGACTCGGATTACAATCCAAAACTTTCAGATTTTGGATTGGCCATAAATGGTCCCGACGAAGATGATACACATGTAACGACTCGTATCATGGGGACAGAAGGTTATGCGGCCCCAGAATACATCATGACAGGTCATTTGTCAACAATGAGTGATGTGTTCAGCTTTGGGGTGCTCCTATTAGAGTTGCTAACCGGTCGACGAGCGATCGACAAGAATCGACCGAGCCGAGAACAGAACTTGGTGGCTTGGGGAAGACATCTTTTGAAAGATCACCACAAACTTGAAAAGATAATTGATCCAAGGCTTGAGGGGCATTACTCAAATGAAGGGGCTAAAAAATTGGCTACAATAGCTCACCAATGCCTTAGCCACCACCCAAAATGTAGGCCCTCAATGAGCACAGTGGTGAAGGATTTGGAGGTTGTTCTTAACATGAAAGAGTTTCTAACTGAGCCATTTGTGTATATTGTCCCAAGTGAAGAGATGAAAGAGGTGGAGAGACTGGAGAACCGTCATCGATACGATGACCGAAAAGGTCGAAGCTATAGGCTTCGGGTGTCGTCATCGAGATTGAGATCTGGTGCTGTTCATTCTGATACAGCTTTTATGGAAAATTTATAG 1290 40.16 MGFKKLFSLKYLIPSCLKPKKLLTGPSSAGFQTSKKISLRRILSLSDMSVRSSLSVISDLSNSCNGSNLQIFTFKELEEVTENFTKSNYLGEGGFGPVFKGFIEDNFKPGLKSQQVAVKILDLDGSQGHREWLAEVFFLGQLRHPNLVNLIGYCLEDEQRLLVYEYMEGGNLENLLFKCCYVSNLTWLQRIKIALGSAKGLAFLHETEKPIIFRDFKASNILLDSDYNPKLSDFGLAINGPDEDDTHVTTRIMGTEGYAAPEYIMTGHLSTMSDVFSFGVLLLELLTGRRAIDKNRPSREQNLVAWGRHLLKDHHKLEKIIDPRLEGHYSNEGAKKLATIAHQCLSHHPKCRPSMSTVVKDLEVVLNMKEFLTEPFVYIVPSEEMKEVERLENRHRYDDRKGRSYRLRVSSSRLRSGAVHSDTAFMENL 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1808751 1810413 + CaPI482276_09g001010.1 Cam09g0101 134430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0101 429 PANTHER OS01G0588500 PROTEIN-RELATED 60 365 IPR050823 -
Cam09g0101 429 Pfam Protein tyrosine and serine/threonine kinase 87 362 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0101 429 Gene3D Phosphorylase Kinase; domain 1 55 166 - -
Cam09g0101 429 ProSiteProfiles Protein kinase domain profile. 84 377 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0101 429 SUPERFAMILY Protein kinase-like (PK-like) 69 386 IPR011009 -
Cam09g0101 429 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 167 374 - -
Cam09g0101 429 FunFam Serine/threonine-protein kinase BIK1 51 166 - -
Cam09g0101 429 CDD STKc_IRAK 90 363 - -
Cam09g0101 429 Gene3D Transferase(Phosphotransferase) domain 1 167 374 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1744 Cam-Chr5:26086969 Cam09g0101 Cam-Chr9:1808751 5.10E-109 dispersed
Cam09g0101 Cam-Chr9:1808751 Cam11g1148 Cam-Chr11:22539145 3.40E-102 dispersed
Cam11g0153 Cam-Chr11:3177617 Cam09g0101 Cam-Chr9:1808751 2.30E-121 wgd
Cam03g1526 Cam-Chr3:30206806 Cam09g0101 Cam-Chr9:1808751 2.30E-122 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85412 PF07714 PK_Tyr_Ser-Thr 5.30E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0101 - - - 0.0