Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam09g0174 | ATGTGGAGGCTTAAGGTGGCAGATGGCGGGAATGATCCTTACATCTATTCTATGAACAACTTTGTAGGAAGGCAAATATGGGAATTCGACCCCAACGCAGGGACCCCTGAAGAGCGGGCCGAAGTTGAACGCGTTCGCGATGAGTTCACCAAAAATCGTCTCAAAGGTTTTCCAAGTGCTGACTTGCTTTGGCGCCTCCAGCTTCTGAGAGAGAAGAATTTCAAACAAAGCATCCCACGGGTGAAGGTTGAAGAAGGAGAAGAAATGAGTTACGAAATGGCATGGGATGCAATGAGAAGAGGGGCGCATTTCTTAGCGGCCATACAAGCAAGCGATGGGCATTGGCCCAGCGAAACATCGGGCCCACTATTTTACTTGTGTCCCCTCCTTATTTGCATGTACATAATGGGCTTTATGGATACCGCATTCACTCCCGAGCACAAGAAAGAAATGATGCGTTACGTTTACAACCATCAGAATGAAGATGGTGGATGGGGGTTACACGTTGGTGGTCACAGTAACATGTTCTGCACTACCTTCAATTATATCTCTTTACGTTTACTTGGTGAAGGACCTAATGTTGAGCTAGTTTCCAGAGCCAGAGAATGGATTCGTGATCACGGCGGTGTCACATCCATACTTTCTTGGGGAAAGACGTGGCTCTCGATATTAAACGTGTTCGACTGGTCTGCAAGCAACCCCATGCCTCCTGAATATTGGATGTTTCCCACTTGGGTTCCCATTCATCCATCAAACATGATGTGCTACACTCGGATCACCTACATGCCCATGTCTTACCTATATGGAAAAAGGTTCCAAGCACCTCTAACGCCTCTTGTTTTACAATTAAGAGATGAACTTCACACTCAACCCTACGACCAAATTAATTGGAGAAAAGTTCGTCACATGTGTGCTACGGAAGACCTCTACTTTCCACATCCCATTGTCCAAGACTTGCTTTGGGACACTCTTTACTTGCTAAGTGAACCACTCATGACCCGGTGGCCTTTTAACAAATTGATTCGCCAAAAAGCCCTCAATAAGACTATGAGGCATATTCATTATGAGGATGAAAATAGTCGCTACATCACTATTGGTTGCGTCGAAAAGCCATTATGCATGCTAGCTTGTTGGGTTGAAGATCCTAATAGTGAGTACGTGAAGAAGCATTTTGCGAGAATTCCTGATTATTTATGGATGGCGGAAGATGGCATGAAAATGCAAAGTTTTGGTAGCCAATCGTGGGATGCCGCTTTGGCAATGCAAGCGCTGCTTTCTTGTAATATCCCACATGAAATTGGGCCTGCTCTCAACACTGGCCATCAATTCATCAAGAACTCCCAGGTTAGAAACAATCCTCCTGGTGACTACAAAAGTATGTTCCGCTACATGTCTAAAGGATCTTGGACCTTCTCAGACTGTGATCATGGATGGCAAGTTTCTGATTGCACTGCCGAGAATTTGAAGTGTTGTCTACTGCTGTCGTTGCTACCACCTGAAATGGTTGGTGAGAAGATGGAACCTGAACGTTTTTACGATGCTGTTAATGTCATTCTGAACATGCAAAGCAAAAATGGGGGTTTACCAGCCTGGGAGCCAGCGTCAAGTTACTACTGGATGGAGTGGCTGAATCCAGTGGAATTTCTCGAAGATCTAATCATCGAGCACCAGCATGTGGAGTGCACCTCATCTGCGTTGCAAGCAATACTCTTATTTAGGAAACAATACCCAGGACATAGAAGGAAAGAGATCAACAATTTTATCAACAAGGCCGTTCAATTTCTTCAAGATATACAATTGCCTGATGGATCTTGGTATGGGAATTGGGGAATTTGCTATACTTATGGAACGTGGTTCGCACTCAAGGCATTGTCAATGGCGGGGAAGACCTATGAAAATTGTGAGGCACTTCGGAAAGGAGCTAATTTTCTAATCAAGATACAGAATCCAGAAGGAGGATTTGGAGAGAGCTACTTGTCATGTCCTTACAAGAGATATATACCGCTGGATGGGAAAAGATCAAATTTGGTGCAAACGGCATGGGGTATGATGGGTTTGATAAGTGCTGGACAGGCAGATGTAGACCCCACTCCTATTCATCGTGCTGCCAAGTTGTTGATCAATTCTCAAACAGAAGATGGTGATTTTCCACAAGAGGAAATTACGGGAGAATTCTTCAAAAATTGTACTTTACATTTTGCAGCATTTAGAGAAGTATTTCCTGTGATGGCACTAGGAGAATATTGTAATAAGGACCCCGCTCGATGCTCATTCTCATCGTTGACCAGACCCCGGAGAGTGGCACAGTGGTTTGGAATTGGATCAGCCCAAACGCTCTCTATACTTTCCAATTACAGTAGTTTGTTCGAGTTTCACAAGGCCAATCACCCCTTGAAGAAAGCGCAACGAGTAGAAGAGGAAGAAGAAGGACGAAAACTAGAGCCCCAACCCTCTCTCTCAACTTCTCAGAGTTGCAGTAGTCCAAGGTGCATCATTAGTCCATCAGCATTTTTCCCAACTCCATGCTGGAGAACCTTAAATGCTGTTCAACTTAACCCGTCTCATCTCATTATGCACCGGCTTTTGTTTCGGGATTCAATTCTCGTCTCAAAGTTATCGGCTTTACGAGTCAGACCAGGCTTTAGAATTACGTGTTCTATAAACCGCCTTTCCATCATTTTCTGCCTTATTCCAGTTTCCGCGAACTCTGTTTTGTTTTTGGTTTTTTCTTCCTTTGCTTGGGAAATTTCTATTCGTCCATTCCATCCACTTGACCGCCCCCATATTTTCATATTTCGTTTTCATTTGTATCAGTCAGGAATTTCCAAAATTCAGCGACCAGGGTCGGGGGGCGATTTGCCCCAGGGTGGCGAGTACAACCCTTATCCTATTGCGCGGAGGGTAAATTCCTCCCATACCGTTCTCATGGATGATGACATTGAAAATGCTAGCTTGGGGGTGTACCAAGACAGGCAAAGGACTTTCCCCGATATGCGTAGTAAAGTCAACACCCCATTGATATTTCGAATTATGATGGGGATAAATATTCGTGTTCTCTTAGTACTTCTTCTCTTTGCATTTGGAATAATATTCTACATTGGAGCAAGCACTTCCCCAATTATTGTGTTTGTCTTCTCAATTTGCATCGTCAGCTTCTGCTTTTCGATATATCTCACCAAATGGGTGCTCTCGAAAGATGAAGGGCCACAGGAGATGGCTCAGATTTCAGAGGCAATACGTGATGGGGCAGAAGGTTTCTTTAGGACTCAGTATAGTACCATCTCCAAAATGGCTATGTTACTTGCAGTAGTGATTCTTTGCATATACTTGTTTCGTAGTACTACTCCTCAACAAGAATCTTCCGGAATAGGGAGGTCAACAACTGCTTATATTACTGTTGCAGCATTTCTGTTAGGAGCCTTGTGTTCAGGTATTGCAGGGTATGTTGGAATGTGGGTTTCAGTTCGTGCAAATGTCAGGGTCTCTAGTGCTGCCAGACGGTCTGCAAGGGAGGCATTGCAGATTGCTGTCCGGGCTGGTGGTTTTTCTGCCATAGTTGTTGTTGGCATGGCTGTTATTGGTATAGCCATCCTGTATGCTGCATTTCATGTTTGGTTGGATGTGGGTTCGCCAGGTTCAACCAAGGTTACTGACTTGCCTCTTCTCCTTGTGGGTTATGGTTTTGGAGCTTCTTTTGTTGCCCTATTTGCTCAGTTGGGTGGTGGTATCTATACCAAAGCTGCTGATGTTGGGGCAGACCTTGTCGGAAAAGTTGAGCAGGGAATACCAGAAGATGACCCAAGAAATCCTGCTGTTATTGCAGATCTGGTTGGGGACAATGTGGGCGATTGTGCTGCTCGAGGTGCAGATCTCTTTGAAAGCATAGCTGCTGAAATTATTAGTGCCATGATACTTGGGGGGACAATGGCTGAACGTTGTAAAATTGAAGATCCATCTGGTTTCATTTTATTTCCGCTGGTAGTACACTCCTTTGATCTGGTGATTTCATCAATTGGCATTCTCTCTATCAGGAGAGGTAATCGTGAATCTGGTGTTAAGGGTCCCATAGAGGATCCAATGACTATTCTGCAGAGAGGATACTCTGTCACTATCGTTCTAGCTGTTCTAACATTTGGCGTGTCTACCCGGTGGTTGCTTCATACTGAACAAGCACCTTCTGCATGGTTCAACTTTGCCTTGTGTGGCTTGGTTGGTATTATAACGGCTTACATTTTTGTCTGGATCACCAAATACTACACTGACTACAAGCATGAGCCCGTGCGTTCATTAGCACTTTCTAGCTCCACAGGCCATGGGACAAACATAATTGCTGGAGTCAGTTTGGGCCTAGAATCAACAGCACTTCCTGTTCTTGTTATTAGTGTTTCTATTGTTTCAGCTTTCTGGTTGGGTCGCACATCAGGACTCGTGGACGAAGCTGGAAATCCAACAGGTGGACTATTTGGTACTGCTGTAGCAACAATGGGAATGCTCAGCACTGCTGCCTATGTTCTCACAATGGATATGTTTGGGCCAATAGCTGATAATGCTGGTGGAATTGTTGAGATGAGTCAGCAGCCAGAAAGCGTTCGGGAGATTACTGATCTTCTTGATGCAGTAGGTAACACAACTAAAGCGACCACAAAAGGTTTTGCCATTGGCTCTGCAGCACTGGCATCCTTCTTACTTTTCAGTGCTTATATGGATGAGGTATCTGCATTTGCTCATGAACCTTTTAAACAGGTAGATATTGCAATTCCAGAAGTTTTCGTTGGTGGTTTGTTGGGTTCCATGCTTATTTTTCTCTTTAGTGCTTGGGCCTGCTCTGCTGTTGGCCGAACAGCCCAAGAGGTTGTAAAGGAAGTAAGAAGACAGTTCATTGAGAGGCCTGGTATTATGGATTATACCGAGAAACCAGAATATGGACGTTGCGTTGCTATTGTAGCATCAGCATCTTTAAGGGAGATGATTAAACCTGGTGCTTTGGCTATCATTTCTCCTATGGCAGTTGGCTTCCTGTTTAGAATATTGGGACACTACACTGGGCAGCCGCTTTTAGGGGCCAAGGTCGTTGCTGCGATGCTGATGTTTGCCACAGTCTCCGGTATTCTCATGGCACTTTTTCTGAACACAGCAGGGGGTGCCTGGGATAATGCCAAGAAGTATATAGAGACTGGGGTTCTTGGAGGTAAAGGTAGCGATTGTCATAAAGCTGCCGTAACTGGGGACACTGTAGGTGACCCATTCAAGGACACAGCAGGGCCTTCTCTTCACGTTCTCATTAAAATGCTCGCAACCATAACGCTGATATATGACATGGAATCTGAAGAACACCTTGTTGTTGAAAACCGAATTCTTCCTCAGCTTCCCGCAGTAATATTTGGAATGCTTGGTGCTTGCTTTGATGATTTCCCATGTGGGAAAATAAAATATTTCAATCCTGAATACACAAAAGAGAGTAATCGCCAATCCAAATCAAATCATGTTGTACTCAGATCTTACAACTTGTTAGGAAACAACCAGCCAGAAAAAAAAACCTTGTTGACTGAGCAACCATCCTGGTTGAGTGGTAATTTGCAAATCGCGAATGGGAATGGAGCCTCGTGGTTGAGTGGGTCTGAGATAGATGGTCGGCGTACAACGTGGCAGAGAATGGCAACGGTGGCGTTGAAAGCTGAAGCAGCAGAGCTCAGTGGCTGTGGCTAG | 5706 | 44.67 | MWRLKVADGGNDPYIYSMNNFVGRQIWEFDPNAGTPEERAEVERVRDEFTKNRLKGFPSADLLWRLQLLREKNFKQSIPRVKVEEGEEMSYEMAWDAMRRGAHFLAAIQASDGHWPSETSGPLFYLCPLLICMYIMGFMDTAFTPEHKKEMMRYVYNHQNEDGGWGLHVGGHSNMFCTTFNYISLRLLGEGPNVELVSRAREWIRDHGGVTSILSWGKTWLSILNVFDWSASNPMPPEYWMFPTWVPIHPSNMMCYTRITYMPMSYLYGKRFQAPLTPLVLQLRDELHTQPYDQINWRKVRHMCATEDLYFPHPIVQDLLWDTLYLLSEPLMTRWPFNKLIRQKALNKTMRHIHYEDENSRYITIGCVEKPLCMLACWVEDPNSEYVKKHFARIPDYLWMAEDGMKMQSFGSQSWDAALAMQALLSCNIPHEIGPALNTGHQFIKNSQVRNNPPGDYKSMFRYMSKGSWTFSDCDHGWQVSDCTAENLKCCLLLSLLPPEMVGEKMEPERFYDAVNVILNMQSKNGGLPAWEPASSYYWMEWLNPVEFLEDLIIEHQHVECTSSALQAILLFRKQYPGHRRKEINNFINKAVQFLQDIQLPDGSWYGNWGICYTYGTWFALKALSMAGKTYENCEALRKGANFLIKIQNPEGGFGESYLSCPYKRYIPLDGKRSNLVQTAWGMMGLISAGQADVDPTPIHRAAKLLINSQTEDGDFPQEEITGEFFKNCTLHFAAFREVFPVMALGEYCNKDPARCSFSSLTRPRRVAQWFGIGSAQTLSILSNYSSLFEFHKANHPLKKAQRVEEEEEGRKLEPQPSLSTSQSCSSPRCIISPSAFFPTPCWRTLNAVQLNPSHLIMHRLLFRDSILVSKLSALRVRPGFRITCSINRLSIIFCLIPVSANSVLFLVFSSFAWEISIRPFHPLDRPHIFIFRFHLYQSGISKIQRPGSGGDLPQGGEYNPYPIARRVNSSHTVLMDDDIENASLGVYQDRQRTFPDMRSKVNTPLIFRIMMGINIRVLLVLLLFAFGIIFYIGASTSPIIVFVFSICIVSFCFSIYLTKWVLSKDEGPQEMAQISEAIRDGAEGFFRTQYSTISKMAMLLAVVILCIYLFRSTTPQQESSGIGRSTTAYITVAAFLLGALCSGIAGYVGMWVSVRANVRVSSAARRSAREALQIAVRAGGFSAIVVVGMAVIGIAILYAAFHVWLDVGSPGSTKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAERCKIEDPSGFILFPLVVHSFDLVISSIGILSIRRGNRESGVKGPIEDPMTILQRGYSVTIVLAVLTFGVSTRWLLHTEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRSLALSSSTGHGTNIIAGVSLGLESTALPVLVISVSIVSAFWLGRTSGLVDEAGNPTGGLFGTAVATMGMLSTAAYVLTMDMFGPIADNAGGIVEMSQQPESVREITDLLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSAFAHEPFKQVDIAIPEVFVGGLLGSMLIFLFSAWACSAVGRTAQEVVKEVRRQFIERPGIMDYTEKPEYGRCVAIVASASLREMIKPGALAIISPMAVGFLFRILGHYTGQPLLGAKVVAAMLMFATVSGILMALFLNTAGGAWDNAKKYIETGVLGGKGSDCHKAAVTGDTVGDPFKDTAGPSLHVLIKMLATITLIYDMESEEHLVVENRILPQLPAVIFGMLGACFDDFPCGKIKYFNPEYTKESNRQSKSNHVVLRSYNLLGNNQPEKKTLLTEQPSWLSGNLQIANGNGASWLSGSEIDGRRTTWQRMATVALKAEAAELSGCG | 1901 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 2499997 | 2522955 | - | CaPI482276_09g001740.1 | Cam09g0174 | 134503 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam09g0174 | 1901 | Pfam | Squalene-hopene cyclase C-terminal domain | 414 | 749 | IPR032696 | - | |
| Cam09g0174 | 1901 | SUPERFAMILY | Terpenoid cyclases/Protein prenyltransferases | 348 | 753 | IPR008930 | - | |
| Cam09g0174 | 1901 | FunFam | Terpene cyclase/mutase family member | 386 | 755 | - | - | |
| Cam09g0174 | 1901 | Hamap | Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. | 1038 | 1776 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
| Cam09g0174 | 1901 | MobiDBLite | consensus disorder prediction | 800 | 827 | - | - | |
| Cam09g0174 | 1901 | ProSitePatterns | Terpene synthases signature. | 602 | 616 | IPR002365 | GO:0016866(InterPro) | |
| Cam09g0174 | 1901 | Gene3D | - | 119 | 411 | - | - | |
| Cam09g0174 | 1901 | CDD | SQCY_1 | 98 | 748 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Cam09g0174 | 1901 | Pfam | Squalene-hopene cyclase N-terminal domain | 100 | 358 | IPR032697 | - | |
| Cam09g0174 | 1901 | Gene3D | - | 486 | 720 | - | - | |
| Cam09g0174 | 1901 | NCBIfam | squalene/oxidosqualene cyclases | 97 | 749 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Cam09g0174 | 1901 | NCBIfam | V-type H(+)-translocating pyrophosphatase | 1043 | 1771 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
| Cam09g0174 | 1901 | Pfam | Inorganic H+ pyrophosphatase | 1049 | 1770 | IPR004131 | GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro) | |
| Cam09g0174 | 1901 | PANTHER | TERPENE CYCLASE/MUTASE FAMILY MEMBER | 1 | 751 | IPR018333 | GO:0005811(InterPro)|GO:0016104(PANTHER)|GO:0016104(InterPro)|GO:0016866(InterPro)|GO:0042300(PANTHER) | |
| Cam09g0174 | 1901 | SUPERFAMILY | Terpenoid cyclases/Protein prenyltransferases | 121 | 407 | IPR008930 | - | |
| Cam09g0174 | 1901 | MobiDBLite | consensus disorder prediction | 800 | 814 | - | - | |
| Cam09g0174 | 1901 | SFLD | Prenyltransferase Like 2 | 94 | 750 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam02g1681 | Cam-Chr2:29761583 | Cam09g0174 | Cam-Chr9:2499997 | 0.00E+00 | dispersed | |
| Cam06g1302 | Cam-Chr6:24517065 | Cam09g0174 | Cam-Chr9:2499997 | 3.30E-116 | dispersed | |
| Cam06g1992 | Cam-Chr6:30650261 | Cam09g0174 | Cam-Chr9:2499997 | 0.00E+00 | dispersed | |
| Cam09g0001 | Cam-Chr9:990400 | Cam09g0174 | Cam-Chr9:2499997 | 0.00E+00 | dispersed | |
| Cam09g0174 | Cam-Chr9:2499997 | Cam09g2239 | Cam-Chr9:36948410 | 1.70E-267 | dispersed | |
| Cam09g0174 | Cam-Chr9:2499997 | Cam09g0175 | Cam-Chr9:2534789 | 1.60E-249 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam09g0174 | K23025 | - | ag:BAB68529 | 1509.2 |