Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0191 ATGGCCGTTGTCATGTCCGACGACCACCCCTCTCGCCGTCTTAAGATTCTTCCTTCTTCTCCGGCTCTCTCTCTCACTCTTGCTGGGGTTTTTGGGAATGCGGCGGCGATGGATGTGGAGTTCGACGCCCCGGTGAGGAGGGACGACAGCTACAGCGACAACTCTGAACCGGCGGGATCCAGGTCGGCGGAGGATTTGGGGGTCGACCCTGATGATGAAGATGAAGATAAATTACAGGGGAATACAAGGAAGAGGAAGAATCGTCATACTTTAGAGCAAATCAGAGAAATGGAAATGTTGTTTAAAGAATCACCTCATCCAGATGAGAAACAACGGCAACAACTCAGTGAGAAACTTGGTCTTTCTTGTAGGCAAATCAAGTTCTGGTTTCAGAATCGTAGAACTCAAATCAAGGCTATTCACGAGCGTCATGAAAACGCTTTATTGAAAGGAGAAATGGAGAAATTGCGAGAAGAAAACCAAGCTATGAGAGAAATGATCAGTAAATCTTCTTGCCCTAAATGTTGTTCTTCACCTAATTCCGTAGACCCAATTTTCACCAGCTCTGATCAACAACAACAACAACTAGTAACTGAAATTGCTCGACTAAAAGCTGAGGTGGAGAGATTACGAACAGCTCTGGATAAATACGTACCGGCGGGGACATCATCGGGGGAGAACAACGAGGAAGGAATAGAGAGGAGGAGGAATTTGGAGAAATCGAAGAGTATTTTGGGGACGGAGAAAGGTAGGGTTATGATGATAGGGAAGCGGGCGATTGAGGAGGTGGTGAAAATGGGGGATTCCGATGAGCCGCTGTGGGTGAGAAGCGTGGAAACAGGGAGAGAACTACTGAATTACGATGTGTATATGAAGGAATTGGCGGCCGGAAATGAGCGAGGGAAGAGAGAAGTGGAAGCGTCGAGAGAAACCGGCGTGGTGTTCGTGGATCTCCATCGATTGGTTCAGAGCTTCATGGATGTGGTTCGATGGAAGGAAATGTTTCCGTCGATAATCTCCAAGGCGTCGACAATGGAGGTCGTCTGCAATGGCGACGGGACCAACAAGGACGGCGCAGTTCAACTGATGTATGCAGAGCTCCAAATGTTGACCCCAATCCTCCCTCCAAGAGAGATCTTTTTCATTCGAAGTTGCAAGCAACTAAGCTCCAATAAATGGGTCGTCGCCGATGTCTCCATCGACAAAGTCGGAGACCATATCGACTCATCTTCCTCTCGTTGTAGGAAACGCCCCTCTGGTTGCATCATCCAAGACACATCTGACGGTCATTGTAAGGTCACGTGGGTAGAGCACTGGGAATGCCACAAGATTGGACTTCACACCATATATCGAACCATTGTCAACAGTGGGTTGATATTCGGGGCGAGGCATTGGATGGCCACGTTACAAAGCCATTGTGAGTGGCAGGTTTTCTTCATGGCTACCAACGTTCCCATGAAGGATTCCACTGGAATCACCACTGTTGGTGGGAGAAAAAGTGTTCTTCGATTGGCTCAGAGAATGGCCTCTAGTATTTATCAAGCCATTGGTGCTTCAAGCAGCCATACATGGACCAAGATCCAGAGCAAAATAGGTGAAACCATACGTATTGCTTCTAGGAAGAACTTGAAAAACCCACAAGAACCTACTGGTTTGATCTTGTGTGCAGTTGCTTCTGTTTGGCTACCTGTTTCCCCTAAACTCTTGTTCGAATTCTTGATCGATGAATCTCGCCGACCCGAGTGGGATGTAATGCTAAGTGGTGGTCAAGCTGAAATGTTAGCAAACTTTGCCAAAGGACAGAATCGAGGCAATGCCGTAACTATCCAAGCAATAAAATCAGACGAAATCAACACGTGGATTCTACAAGATAGTCTAACGAATGAATACGAATCAACGGTCGTCTATGCTCAAGTTGACATGAATAGCATGAAATCTGTGATGGCCGGGTTCGACCCGAGCAATATCACGACGTTACCGACAGGCTTCTCGATTCTTCCAGATGGACACCCCACAAGGCCATTGGTTATCAGTTCTAGCAAAGAGGAGAGGGAGACGGAAGGAGGCTCATTGCTAACAATAGCATCTCAAATCCTTGTTAGTCCCTCCCCAACAGCCGAAACAACGTCGCAGTCAGTTGATTATGTTAACAATATTATATCACATACATTAGAAAATATTAAAGCAAGCCTAAAAGGTGAGGATGATTGA 2211 46.72 MAVVMSDDHPSRRLKILPSSPALSLTLAGVFGNAAAMDVEFDAPVRRDDSYSDNSEPAGSRSAEDLGVDPDDEDEDKLQGNTRKRKNRHTLEQIREMEMLFKESPHPDEKQRQQLSEKLGLSCRQIKFWFQNRRTQIKAIHERHENALLKGEMEKLREENQAMREMISKSSCPKCCSSPNSVDPIFTSSDQQQQQLVTEIARLKAEVERLRTALDKYVPAGTSSGENNEEGIERRRNLEKSKSILGTEKGRVMMIGKRAIEEVVKMGDSDEPLWVRSVETGRELLNYDVYMKELAAGNERGKREVEASRETGVVFVDLHRLVQSFMDVVRWKEMFPSIISKASTMEVVCNGDGTNKDGAVQLMYAELQMLTPILPPREIFFIRSCKQLSSNKWVVADVSIDKVGDHIDSSSSRCRKRPSGCIIQDTSDGHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGARHWMATLQSHCEWQVFFMATNVPMKDSTGITTVGGRKSVLRLAQRMASSIYQAIGASSSHTWTKIQSKIGETIRIASRKNLKNPQEPTGLILCAVASVWLPVSPKLLFEFLIDESRRPEWDVMLSGGQAEMLANFAKGQNRGNAVTIQAIKSDEINTWILQDSLTNEYESTVVYAQVDMNSMKSVMAGFDPSNITTLPTGFSILPDGHPTRPLVISSSKEERETEGGSLLTIASQILVSPSPTAETTSQSVDYVNNIISHTLENIKASLKGEDD 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2666975 2674417 + CaPI482276_09g001910.1 Cam09g0191 134520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0191 736 ProSiteProfiles 'Homeobox' domain profile. 80 140 IPR001356 GO:0003677(InterPro)
Cam09g0191 736 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 73 732 IPR042160 -
Cam09g0191 736 Pfam Homeodomain 83 138 IPR001356 GO:0003677(InterPro)
Cam09g0191 736 ProSitePatterns 'Homeobox' domain signature. 115 138 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Cam09g0191 736 SMART START_1 254 475 IPR002913 GO:0008289(InterPro)
Cam09g0191 736 Pfam START domain 258 474 IPR002913 GO:0008289(InterPro)
Cam09g0191 736 CDD homeodomain 83 138 IPR001356 GO:0003677(InterPro)
Cam09g0191 736 SMART HOX_1 82 144 IPR001356 GO:0003677(InterPro)
Cam09g0191 736 SUPERFAMILY Bet v1-like 518 722 - -
Cam09g0191 736 SUPERFAMILY Bet v1-like 255 474 - -
Cam09g0191 736 MobiDBLite consensus disorder prediction 46 92 - -
Cam09g0191 736 MobiDBLite consensus disorder prediction 218 240 - -
Cam09g0191 736 SUPERFAMILY Homeodomain-like 71 139 IPR009057 -
Cam09g0191 736 Gene3D - 253 476 IPR023393 -
Cam09g0191 736 Coils Coil 193 213 - -
Cam09g0191 736 ProSiteProfiles START domain profile. 245 478 IPR002913 GO:0008289(InterPro)
Cam09g0191 736 MobiDBLite consensus disorder prediction 76 92 - -
Cam09g0191 736 Coils Coil 139 166 - -
Cam09g0191 736 CDD START_ArGLABRA2_like 249 474 - -
Cam09g0191 736 FunFam Homeobox-leucine zipper protein HDG1 69 156 - -
Cam09g0191 736 Gene3D - 70 151 - -
Cam09g0191 736 FunFam Homeobox-leucine zipper protein GLABRA 2 254 474 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0191 Cam-Chr9:2666975 Cam09g1150 Cam-Chr9:12205998 4.00E-111 dispersed
Cam07g1252 Cam-Chr7:26905000 Cam09g0191 Cam-Chr9:2666975 1.60E-208 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52523 PF01852 START 1.10E-50 CL0209 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0191 K09338 - csv:101218545 1296.18