Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g0191 | ATGGCCGTTGTCATGTCCGACGACCACCCCTCTCGCCGTCTTAAGATTCTTCCTTCTTCTCCGGCTCTCTCTCTCACTCTTGCTGGGGTTTTTGGGAATGCGGCGGCGATGGATGTGGAGTTCGACGCCCCGGTGAGGAGGGACGACAGCTACAGCGACAACTCTGAACCGGCGGGATCCAGGTCGGCGGAGGATTTGGGGGTCGACCCTGATGATGAAGATGAAGATAAATTACAGGGGAATACAAGGAAGAGGAAGAATCGTCATACTTTAGAGCAAATCAGAGAAATGGAAATGTTGTTTAAAGAATCACCTCATCCAGATGAGAAACAACGGCAACAACTCAGTGAGAAACTTGGTCTTTCTTGTAGGCAAATCAAGTTCTGGTTTCAGAATCGTAGAACTCAAATCAAGGCTATTCACGAGCGTCATGAAAACGCTTTATTGAAAGGAGAAATGGAGAAATTGCGAGAAGAAAACCAAGCTATGAGAGAAATGATCAGTAAATCTTCTTGCCCTAAATGTTGTTCTTCACCTAATTCCGTAGACCCAATTTTCACCAGCTCTGATCAACAACAACAACAACTAGTAACTGAAATTGCTCGACTAAAAGCTGAGGTGGAGAGATTACGAACAGCTCTGGATAAATACGTACCGGCGGGGACATCATCGGGGGAGAACAACGAGGAAGGAATAGAGAGGAGGAGGAATTTGGAGAAATCGAAGAGTATTTTGGGGACGGAGAAAGGTAGGGTTATGATGATAGGGAAGCGGGCGATTGAGGAGGTGGTGAAAATGGGGGATTCCGATGAGCCGCTGTGGGTGAGAAGCGTGGAAACAGGGAGAGAACTACTGAATTACGATGTGTATATGAAGGAATTGGCGGCCGGAAATGAGCGAGGGAAGAGAGAAGTGGAAGCGTCGAGAGAAACCGGCGTGGTGTTCGTGGATCTCCATCGATTGGTTCAGAGCTTCATGGATGTGGTTCGATGGAAGGAAATGTTTCCGTCGATAATCTCCAAGGCGTCGACAATGGAGGTCGTCTGCAATGGCGACGGGACCAACAAGGACGGCGCAGTTCAACTGATGTATGCAGAGCTCCAAATGTTGACCCCAATCCTCCCTCCAAGAGAGATCTTTTTCATTCGAAGTTGCAAGCAACTAAGCTCCAATAAATGGGTCGTCGCCGATGTCTCCATCGACAAAGTCGGAGACCATATCGACTCATCTTCCTCTCGTTGTAGGAAACGCCCCTCTGGTTGCATCATCCAAGACACATCTGACGGTCATTGTAAGGTCACGTGGGTAGAGCACTGGGAATGCCACAAGATTGGACTTCACACCATATATCGAACCATTGTCAACAGTGGGTTGATATTCGGGGCGAGGCATTGGATGGCCACGTTACAAAGCCATTGTGAGTGGCAGGTTTTCTTCATGGCTACCAACGTTCCCATGAAGGATTCCACTGGAATCACCACTGTTGGTGGGAGAAAAAGTGTTCTTCGATTGGCTCAGAGAATGGCCTCTAGTATTTATCAAGCCATTGGTGCTTCAAGCAGCCATACATGGACCAAGATCCAGAGCAAAATAGGTGAAACCATACGTATTGCTTCTAGGAAGAACTTGAAAAACCCACAAGAACCTACTGGTTTGATCTTGTGTGCAGTTGCTTCTGTTTGGCTACCTGTTTCCCCTAAACTCTTGTTCGAATTCTTGATCGATGAATCTCGCCGACCCGAGTGGGATGTAATGCTAAGTGGTGGTCAAGCTGAAATGTTAGCAAACTTTGCCAAAGGACAGAATCGAGGCAATGCCGTAACTATCCAAGCAATAAAATCAGACGAAATCAACACGTGGATTCTACAAGATAGTCTAACGAATGAATACGAATCAACGGTCGTCTATGCTCAAGTTGACATGAATAGCATGAAATCTGTGATGGCCGGGTTCGACCCGAGCAATATCACGACGTTACCGACAGGCTTCTCGATTCTTCCAGATGGACACCCCACAAGGCCATTGGTTATCAGTTCTAGCAAAGAGGAGAGGGAGACGGAAGGAGGCTCATTGCTAACAATAGCATCTCAAATCCTTGTTAGTCCCTCCCCAACAGCCGAAACAACGTCGCAGTCAGTTGATTATGTTAACAATATTATATCACATACATTAGAAAATATTAAAGCAAGCCTAAAAGGTGAGGATGATTGA | 2211 | 46.72 | MAVVMSDDHPSRRLKILPSSPALSLTLAGVFGNAAAMDVEFDAPVRRDDSYSDNSEPAGSRSAEDLGVDPDDEDEDKLQGNTRKRKNRHTLEQIREMEMLFKESPHPDEKQRQQLSEKLGLSCRQIKFWFQNRRTQIKAIHERHENALLKGEMEKLREENQAMREMISKSSCPKCCSSPNSVDPIFTSSDQQQQQLVTEIARLKAEVERLRTALDKYVPAGTSSGENNEEGIERRRNLEKSKSILGTEKGRVMMIGKRAIEEVVKMGDSDEPLWVRSVETGRELLNYDVYMKELAAGNERGKREVEASRETGVVFVDLHRLVQSFMDVVRWKEMFPSIISKASTMEVVCNGDGTNKDGAVQLMYAELQMLTPILPPREIFFIRSCKQLSSNKWVVADVSIDKVGDHIDSSSSRCRKRPSGCIIQDTSDGHCKVTWVEHWECHKIGLHTIYRTIVNSGLIFGARHWMATLQSHCEWQVFFMATNVPMKDSTGITTVGGRKSVLRLAQRMASSIYQAIGASSSHTWTKIQSKIGETIRIASRKNLKNPQEPTGLILCAVASVWLPVSPKLLFEFLIDESRRPEWDVMLSGGQAEMLANFAKGQNRGNAVTIQAIKSDEINTWILQDSLTNEYESTVVYAQVDMNSMKSVMAGFDPSNITTLPTGFSILPDGHPTRPLVISSSKEERETEGGSLLTIASQILVSPSPTAETTSQSVDYVNNIISHTLENIKASLKGEDD | 736 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2666975 | 2674417 | + | CaPI482276_09g001910.1 | Cam09g0191 | 134520 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g0191 | 736 | ProSiteProfiles | 'Homeobox' domain profile. | 80 | 140 | IPR001356 | GO:0003677(InterPro) | |
Cam09g0191 | 736 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 73 | 732 | IPR042160 | - | |
Cam09g0191 | 736 | Pfam | Homeodomain | 83 | 138 | IPR001356 | GO:0003677(InterPro) | |
Cam09g0191 | 736 | ProSitePatterns | 'Homeobox' domain signature. | 115 | 138 | IPR017970 | GO:0000981(InterPro)|GO:0006355(InterPro) | |
Cam09g0191 | 736 | SMART | START_1 | 254 | 475 | IPR002913 | GO:0008289(InterPro) | |
Cam09g0191 | 736 | Pfam | START domain | 258 | 474 | IPR002913 | GO:0008289(InterPro) | |
Cam09g0191 | 736 | CDD | homeodomain | 83 | 138 | IPR001356 | GO:0003677(InterPro) | |
Cam09g0191 | 736 | SMART | HOX_1 | 82 | 144 | IPR001356 | GO:0003677(InterPro) | |
Cam09g0191 | 736 | SUPERFAMILY | Bet v1-like | 518 | 722 | - | - | |
Cam09g0191 | 736 | SUPERFAMILY | Bet v1-like | 255 | 474 | - | - | |
Cam09g0191 | 736 | MobiDBLite | consensus disorder prediction | 46 | 92 | - | - | |
Cam09g0191 | 736 | MobiDBLite | consensus disorder prediction | 218 | 240 | - | - | |
Cam09g0191 | 736 | SUPERFAMILY | Homeodomain-like | 71 | 139 | IPR009057 | - | |
Cam09g0191 | 736 | Gene3D | - | 253 | 476 | IPR023393 | - | |
Cam09g0191 | 736 | Coils | Coil | 193 | 213 | - | - | |
Cam09g0191 | 736 | ProSiteProfiles | START domain profile. | 245 | 478 | IPR002913 | GO:0008289(InterPro) | |
Cam09g0191 | 736 | MobiDBLite | consensus disorder prediction | 76 | 92 | - | - | |
Cam09g0191 | 736 | Coils | Coil | 139 | 166 | - | - | |
Cam09g0191 | 736 | CDD | START_ArGLABRA2_like | 249 | 474 | - | - | |
Cam09g0191 | 736 | FunFam | Homeobox-leucine zipper protein HDG1 | 69 | 156 | - | - | |
Cam09g0191 | 736 | Gene3D | - | 70 | 151 | - | - | |
Cam09g0191 | 736 | FunFam | Homeobox-leucine zipper protein GLABRA 2 | 254 | 474 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam09g0191 | Cam-Chr9:2666975 | Cam09g1150 | Cam-Chr9:12205998 | 4.00E-111 | dispersed | |
Cam07g1252 | Cam-Chr7:26905000 | Cam09g0191 | Cam-Chr9:2666975 | 1.60E-208 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52523 | PF01852 | START | 1.10E-50 | CL0209 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g0191 | K09338 | - | csv:101218545 | 1296.18 |