Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0207 ATGGATTTCTGGCCAGAATTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCTGGTGGATTTGGTGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAGTAAGGCAACAGCAATCCATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATCATTGCCAACGATGGCGTTGCTGGTCTTTACAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCAACTCCTCCTCCCAATCCAATGGTGACCCTCCAAGCTATAAGGCCGTGGCCTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTGGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGCCATGCAGCAGCATCACACCAACAATTAATTTCTTCTTCTTCCCATAGAGGTCCATTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGAATTTACAGAGGACTTACCATAACCATGCTGAGAGATGCACCTGCACACGGCATCTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGCGTCGGCACAATGCTGGTCGCCGGAGGGCTTGCCGGAGTTGCTAGCTGGGTTTTTTGTTATCCCTTAGATGTATTGAAGACTAGAATTCAGGGTCAGACACAAAGTTCACCTCGAAAGTACAATGGAATTGTGGATTGTCTTAGCAAAAGTGTGAGAGAAGAGGGTTACAGAGTGCTATGGCGAGGGCTCGGGACAGCAGTTGCCAGAGCATTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACATTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAACAATAA 939 48.78 MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGVAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSSQSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHAAASHQQLISSSSHRGPLSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSPRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNQTQQ 312
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2740689 2741734 - CaPI482276_09g002070.1 Cam09g0207 134536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0207 312 Pfam Mitochondrial carrier protein 213 303 IPR018108 -
Cam09g0207 312 Pfam Mitochondrial carrier protein 11 95 IPR018108 -
Cam09g0207 312 Pfam Mitochondrial carrier protein 110 203 IPR018108 -
Cam09g0207 312 Gene3D Mitochondrial carrier domain 110 311 IPR023395 -
Cam09g0207 312 Gene3D Mitochondrial carrier domain 3 109 IPR023395 -
Cam09g0207 312 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 8 302 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Cam09g0207 312 SUPERFAMILY Mitochondrial carrier 12 296 IPR023395 -
Cam09g0207 312 PRINTS Mitochondrial carrier protein signature 119 137 IPR002067 GO:0055085(InterPro)
Cam09g0207 312 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085(InterPro)
Cam09g0207 312 PRINTS Mitochondrial carrier protein signature 175 193 IPR002067 GO:0055085(InterPro)
Cam09g0207 312 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085(InterPro)
Cam09g0207 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 202 IPR018108 -
Cam09g0207 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 92 IPR018108 -
Cam09g0207 312 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0207 Cam-Chr9:2740689 Cam10g2188 Cam-Chr10:35335101 8.00E-21 dispersed
Cam07g1258 Cam-Chr7:26940571 Cam09g0207 Cam-Chr9:2740689 1.10E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0207 K15109 - csv:101222165 548.895