Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0210 ATGGCGATTGGGAATGGAATTACGACACGAATTCTTCCATTTTCCTGCTTTCTATACTGCTATTATTGCTTTATATTAGTGTTCTTTTTGGTGGAGTTTTCCCATGGCCAGTCTACACAAACCAATAATGTTCTTACACAAGGCCAAAAGCTATCAATTGGGTCTCAATTAATTTCATCCACCGCCAACTTTATGCTAGGATTTTACAATCCTTACAATTCTAATACCACTTATTTAGGAATCTCCTACAACACTAATCACCAGAAGCCAATCTGGATAGCCAATCCAAACTCCCCATTTCCCAGCAATTCCACTCCCATCAGCCTCACCATCGACGCCAACGGCAGCTTCAAAATTCAAAATGGCTATTATTCCTTTTCACTCTTCGATGTCGGGCAACCAACCACCAGCAGCGCCATATTGCAAGACGACGGCAACTTTGTACTGCGAGAGCTGAACAGAGATGGATCGGTTAAGCAAATTCTGTGGCAGAGCTTTGATCATCCAACAGATACTCTGCTTCCCGGAATGAAAATTGGGATCAATCACAAAACAAACTCCACTTGGTCATTAACATCATGGACAACCATTGAATCTCCCATGGCAGGAGCATTCACTCTGGCAATGAATCCAAACAATACATATCAATTACTGATGTTTTTCAGAGGTGCTCTGTTTTGGAGCAGCGGGAATTGGAAAGACGGTTCGTTCGAATTCTTACAATATCTGTCGAATTCCGACCCTTACAACAGCAATCAAAACCAAGAAATGTATATCAATCGAATTTCGAATGAGAATGAAACGTTTTTCATTTACTACATTCCGAAATTCGATCGATCTCCCACTCCTTACGCGTATCGAAATCTATATTACCCAAAATCAGGGGAATTTGTACTACCCCAATTGAGATTAGAAGATGGTGGGAATTTGGGGATTAACAATCAGAGTTCGTACTCTGTTTGCTCCCTGTTTGAAAACGAGGATGGAGGGTGTGTGTGGAAAGAACAGCAGAAAATTCCGGAGTGCAGGAATTGGCTGTATGGGTTTAGCGAGCCATTTAGCCCGAGGTTTGGTTACATGGAGGAGGGAATTAATGGTTCTAATTACAACAAACAAAGTGGGAACTTAACCATGTTTGAATGTGAAACTATTTGCATTTTTGATTGTGATTGCATAGCTATTGGATTTAGCGATGAAGAAGATGGCACCAGCTGTGAGATTTGGAAATCAGGAGCCACGTTTAATTCAGTCTCCGCCGGTTCACGAGAGTATTTCTTTCTGGACCCCACGACCCAGACCGGCCAAGGAAAATGGAAGGTTTGGATGCAAGTCACTATCGCTCTAACCATCCCTGCAATTTTGCTACTACTCTGTTTTATTTTGTACATCAAATGGAAAACACATATATTCAAGGTTACGGGGAAAATGAAGAGAAGCTTTGTTTGCGTGATGGGGTTCATATCCGAAGGTTTTAATATTTTAGGAATAATGATAAGACAAATAAGAGATGGGAAAAAGAATCCTGAATTGCAAATTTTTGACTTTGAAACCATTGTTTCTGCCACAAATAATTTTGGAGATGAATGTAAGCTTGGACAAGGTGGTTTTGGACCTGTTTATAAGGGAATTTTGACGGATGGCCAAGAAGTAGCCATTAAAAGATTGTCTAAGAATTCAGGACAAGGATTGGTGGAGTTCAAGAATGAAACTATTTTGATTGCTAAACTTCAACACACAAATTTGGTTAGGCTTATTGGTTGCTGCATTTATAAAGAAGAGAAATTGTTGGTGTATGAGTACATGCCCAACAAAAGCCTTGACTTCTTCCTCTTTGACTCCGAGAAGAAGTTAGCATTAAATTGGGAGAAACGTTTGCACATCATTCAAGGAATCGTTCAAGGACTACTCTACCTTCACTACTACTCAAGGGTACGAATAATTCATCGAGATTTAAAAGTCAGCAATATCTTACTCGATGATGAGATGAATGCGAAAATATCAGATTTTGGTATGGCTAGAGTGTTTAAGCCATCAGAGCATGAAGCAAATACAAGTCGAGTGGTTGGTACATATGGTTATATATCACCAGAATATGCAATGGAGGGCATTTTTTCAATAAAGTCGGACGTGTACAGCTTTGGAATATTATTGTTGGAGATCGTAACAAGTCGAAAAAACTACAACAATTATGACACAGAACGACCACTCAATCTCATAGGATACGCATGGGAATTGTGGGTGAATGGGAGAGGAGAAGAGCTGATTGATTTGGGTTTGTGCAATAACTGTGATGAGAAAGCAAAGGCTTTAAGGTGCATTCATGTTAGTCTTTTGTGCGTCCAACAAGTTCCAGCGGATAGGCCGACGATGTTGGATGTTTATTTCATGATTAATAATGATTCGACTCAACTTCCCTCTCCCAAACAACCTGCTTTTTTTGTTGCTCAAAACCCAAATTCCTCCCAACTACAACTGGTGGAGGTGGTCGATACTGTGCTCATACAACCAGCTGCAGAGCCAACACTGGAAATTTCTTCATTCAATACTATGTCACTCTCACTCATGCTTGCTAGGTGA 2577 40.28 MAIGNGITTRILPFSCFLYCYYCFILVFFLVEFSHGQSTQTNNVLTQGQKLSIGSQLISSTANFMLGFYNPYNSNTTYLGISYNTNHQKPIWIANPNSPFPSNSTPISLTIDANGSFKIQNGYYSFSLFDVGQPTTSSAILQDDGNFVLRELNRDGSVKQILWQSFDHPTDTLLPGMKIGINHKTNSTWSLTSWTTIESPMAGAFTLAMNPNNTYQLLMFFRGALFWSSGNWKDGSFEFLQYLSNSDPYNSNQNQEMYINRISNENETFFIYYIPKFDRSPTPYAYRNLYYPKSGEFVLPQLRLEDGGNLGINNQSSYSVCSLFENEDGGCVWKEQQKIPECRNWLYGFSEPFSPRFGYMEEGINGSNYNKQSGNLTMFECETICIFDCDCIAIGFSDEEDGTSCEIWKSGATFNSVSAGSREYFFLDPTTQTGQGKWKVWMQVTIALTIPAILLLLCFILYIKWKTHIFKVTGKMKRSFVCVMGFISEGFNILGIMIRQIRDGKKNPELQIFDFETIVSATNNFGDECKLGQGGFGPVYKGILTDGQEVAIKRLSKNSGQGLVEFKNETILIAKLQHTNLVRLIGCCIYKEEKLLVYEYMPNKSLDFFLFDSEKKLALNWEKRLHIIQGIVQGLLYLHYYSRVRIIHRDLKVSNILLDDEMNAKISDFGMARVFKPSEHEANTSRVVGTYGYISPEYAMEGIFSIKSDVYSFGILLLEIVTSRKNYNNYDTERPLNLIGYAWELWVNGRGEELIDLGLCNNCDEKAKALRCIHVSLLCVQQVPADRPTMLDVYFMINNDSTQLPSPKQPAFFVAQNPNSSQLQLVEVVDTVLIQPAAEPTLEISSFNTMSLSLMLAR 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2751518 2755481 - CaPI482276_09g002100.1 Cam09g0210 134539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0210 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 805 - -
Cam09g0210 858 ProSiteProfiles Protein kinase domain profile. 525 812 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0210 858 Pfam D-mannose binding lectin 91 194 IPR001480 -
Cam09g0210 858 SMART serkin_6 525 795 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0210 858 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 156 813 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam09g0210 858 Gene3D Transferase(Phosphotransferase) domain 1 601 809 - -
Cam09g0210 858 PIRSF SRK 14 840 IPR024171 GO:0004674(InterPro)
Cam09g0210 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0210 858 SMART blect_4 42 169 IPR001480 -
Cam09g0210 858 Pfam Protein tyrosine and serine/threonine kinase 529 737 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0210 858 SUPERFAMILY Protein kinase-like (PK-like) 508 817 IPR011009 -
Cam09g0210 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 495 600 - -
Cam09g0210 858 Gene3D - 37 167 IPR036426 -
Cam09g0210 858 CDD STKc_IRAK 531 799 - -
Cam09g0210 858 CDD B_lectin 51 169 IPR001480 -
Cam09g0210 858 Gene3D Phosphorylase Kinase; domain 1 499 600 - -
Cam09g0210 858 ProSiteProfiles Bulb-type lectin domain profile. 42 162 IPR001480 -
Cam09g0210 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 196 IPR036426 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0210 Cam-Chr9:2751518 Cam09g0254 Cam-Chr9:3168723 2.20E-270 dispersed
Cam09g0210 Cam-Chr9:2751518 Cam03g0533 Cam-Chr3:6181029 3.50E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85414 PF07714 PK_Tyr_Ser-Thr 1.50E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0210 - - - 0.0