Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0228 ATGGAGATCAAAGAAAAGAAGAGAATTTCAAGTATCTCCTCTCCATTAATGTCATCCTCTTCGATGGCTATCCTCCTGGTTTTTCTTTGTTTCATTTTTAGCGATCCCAGCACAGCATTCGTAGCCGGGGCGGGCACTTCCTTCATTCCCAAAGATAATTTTCTCATTGACTGTGGTGCCAACAAGGAACTTGGTGCACTCCCTGATGGAAGAGTGTTCAAAACTGATGAGCAATCCAAGCAACTCTTAGATGCCAAGGATGATATCATAGCAACCGCTGCACCGGATAAGAAGGCACCGTCCCCGGTCGATTTGACAGCAAGAGTTTTCCTCCAAGAAGCTACTTACATTTTTCAGATGGCAGAGCCTGGATGGCATTGGGTGCGCCTACATTTCATGCCTGTTAAAAGCAATGACTTCGATCTCTTGCAGGCTAAATTTTCAGTAGCTACTGAAAAGTATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTCCTCAATATCACTGAACCAAAACTGTCAATCAAGTTCTTCCCTATGAGGAACTCAGCCGCTTTCATCAATGCCATCGAGGTCGTTTCGGCTCCGGTGGACTTGATTGCTGACTCGAATGTGGAGCTGTCTCCAGTTGGGACTATTGAGGGCCTGACGAAATATGCATTTCAGACATTGTATAGGTTAAACATGGGAGGACCTATAATCAATCCAAGAAATGACACTCTTGGGAGGACATGGGAGACGGATGAAGTTTACAGGACACCCAAAGTTGCTGGTAGGAATGTGGTTGTTGAGACCAACACCATCAAATACCAAGGAGGATTGAAAGAAACAGGCATGTTAATTGCTCCTCCAAGTGTTTATGCAAGTGCAGTTCAAATGGGAGATGCTCAAGTTAGTGTACCAAATTTCAATATCACATGGAAATTTGAGGCAGATCCCTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTCAGCAAAGTACTCAATAATCTGTATTTTAATGTATATGTGAACGGGAAGGCTGCCATAACCAACTTGGATTTGTCACACAAGCTAGGAAGTTTGGCAACTGCATACTACAAGGATGTTGTGGTTAATGCTTCCCTGATTGTAGATGGACTGACAGTTCAAATTAGTCCAGCTAATGTCGAAACCGGTGATGCGAATGCCATTCTAAATGGCATAGAGGTATTGAAAATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAGGTCGGCAAATGGGTCTAACCGTGGCACGGTCGCGGCTGTTGGGTTTGCGATGATGTTTGGGGCGTTTGTTGGGCTCGGTGCCATGGTGATGAAATGGCATAAAAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCCTGGTTGCTTCCTGTACATGCTGGTGACTCAAGCTTTATGACAAGTAAGACTTCATATGGGTCACACAAGACCAACATTTACTCCTCTACTTTAGGCCTTGGTAGGTTCTTCACTTTGGCAGAACTACAAGAAGCCACAAAGAACTTTGATCCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACCAAAGTTGCAGTTAAGAGAGGAAATCCACAATCTGAACAAGGCATAACAGAATTCCAAACAGAAATTCAAATGCTTTCCAAACTCAGACACAGGCATTTGGTTTCTTTGATCGGTTACTGTGATGAAAACGCTGAAATGATCTTGGTATATGAGTTCATGTCAAATGGCCCATTCAGAGATCATTTATATGGAAAGGACTTGTCTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGTATCGGAGCGGCTCGAGGCCTTCATTACCTTCACACAGGAACAGCCCAGGGAATCATCCACCGTGATGTCAAAACAACCAACATTTTACTCGACGAAAACTTCACCGCCAAAGTCGCCGATTTCGGGCTGTCAAAGGATGCTCCAATGGGGCAAGGACATGTCAGTACTGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGGCAACAGTTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTGCTTGAGGCTTTGTGTGCAAGGCCAGCAATCAACCCATCTTTGACAAGAGAACAAGTGAACTTGGCTGATTGGGCAATGCAATGTAAGAAAAAAGGGTGTTTGGAAAAGATAATGGATCCCCTTCTAGCTGGAGCCATAAATCCTGAGTCCATGAAGAAGTTTGCAGAAGCAGCAGAGAAGTGTCTTGCTGAACATGGTGTAGATAGGCCAAGCATGGGGGATGTATTGTGGAATTTGGAGTATGCATTACAACTTCAAGAAGCATTCTCACAAGGCAAGACTGAAGATGAAAACAAAGCTGCAGGCACAGCAACCGTCGCCCCCGCTACCCCTACCACTGTTGATGCTTCGACAAATGCACCGAACTCCGACAACCGCCCTGTTGTGCAGCCAGAACAGAATAGGCAACCAGCAGAGGTACAAGCCATTGATGATCACTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 2628 44.14 MEIKEKKRISSISSPLMSSSSMAILLVFLCFIFSDPSTAFVAGAGTSFIPKDNFLIDCGANKELGALPDGRVFKTDEQSKQLLDAKDDIIATAAPDKKAPSPVDLTARVFLQEATYIFQMAEPGWHWVRLHFMPVKSNDFDLLQAKFSVATEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFFPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLTKYAFQTLYRLNMGGPIINPRNDTLGRTWETDEVYRTPKVAGRNVVVETNTIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLIRFHFCDIVSKVLNNLYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVETGDANAILNGIEVLKISNSVNSLDGEFGVDGRSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLAELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDLSPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLAGAINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENKAAGTATVAPATPTTVDASTNAPNSDNRPVVQPEQNRQPAEVQAIDDHSGSAMFAHFSNLNGR 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2919266 2921893 + CaPI482276_09g002280.1 Cam09g0228 134557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0228 875 CDD STKc_IRAK 530 794 - -
Cam09g0228 875 MobiDBLite consensus disorder prediction 819 851 - -
Cam09g0228 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0228 875 FunFam Receptor-like protein kinase FERONIA 229 414 - -
Cam09g0228 875 PANTHER OS07G0166700 PROTEIN 512 801 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cam09g0228 875 Gene3D Phosphorylase Kinase; domain 1 485 599 - -
Cam09g0228 875 Gene3D Transferase(Phosphotransferase) domain 1 600 821 - -
Cam09g0228 875 FunFam Receptor-like protein kinase FERONIA 600 814 - -
Cam09g0228 875 SUPERFAMILY Protein kinase-like (PK-like) 508 791 IPR011009 -
Cam09g0228 875 ProSiteProfiles Protein kinase domain profile. 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0228 875 Gene3D - 228 414 - -
Cam09g0228 875 Gene3D - 53 207 - -
Cam09g0228 875 FunFam Putative receptor-like protein kinase 53 205 - -
Cam09g0228 875 FunFam receptor-like protein kinase FERONIA 488 599 - -
Cam09g0228 875 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524(InterPro)
Cam09g0228 875 Pfam Protein tyrosine and serine/threonine kinase 529 788 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0228 875 SMART serkin_6 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0228 875 MobiDBLite consensus disorder prediction 806 855 - -
Cam09g0228 875 Pfam Malectin-like domain 56 411 IPR024788 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam06g1737 Cam-Chr6:28671624 Cam09g0228 Cam-Chr9:2919266 3.10E-256 dispersed
Cam09g0228 Cam-Chr9:2919266 Cam11g1862 Cam-Chr11:31189357 1.90E-224 dispersed
Cam01g2108 Cam-Chr1:34046757 Cam09g0228 Cam-Chr9:2919266 1.70E-64 transposed
Cam11g0309 Cam-Chr11:4618815 Cam09g0228 Cam-Chr9:2919266 1.40E-62 wgd
Cam06g1289 Cam-Chr6:24334112 Cam09g0228 Cam-Chr9:2919266 5.40E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85415 PF12819 Malectin_like 1.70E-36 CL0202 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0228 - - - 0.0