Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0254 ATGACTATAGCTCAGCTCACCAACAATTTCAAAGCTAATTCATTTCCTCGAAACAACTATCCAAATTGCAAACCAAAAAGAGTTGATCTCTGGAGTTTTCATCAGTTCCATAACAGAAGGTCAAGGTGCAATTTGGGAATGGCGACCAGCAACGAAATCATGTTTAATTGCTTTGTTCTGGTTTTGCTTCTGCCGTTTTCAAACGCCCAATCTGACGTATTGGCACAAGGCCAAAAACTAACACCTGAGTCTACGCTAATTTCGGCCACGGAGACTTTTTCGCTCGGGTTTTACAGTCCTAGCCTATTGAACAACAGTTACATAGCAATTTGGTACACTAGAGATTCACAGAATCCAGTGTGGATTGCCAATCGTAATTTTGCATTTCCCAGAGATTTTGGGACACCCTGTCTCACAATTGACAGCAATGGCAGCTTGAAGATTGTCCCTAAAGAAGGAAAAGGAAGAAATGGCTATAATTTCTATCTCTTTGAAGTTGAAGAACCCACCAACAGCAGCGCCATTCTTCTAGATAGTGGCAACTTTGTATTGGGTGTGTTGAATCCAGATGGGTCAATTAAGCGACAGCTATGGCAGAGTTTTGATCATCCAACAGACACTCTTCTTCCTGGGATGAAGCTTGGGATCAACCACAAAACTGGAGCCACTTGGTCTATAACATCCCGAAGAGGTGACTATTCTGTTCTATCAGGTTCTTTTACCCTCATAATGAATCCCAACAATACAAATCAGTTGCTGATATTACTTAGAGGAGCCGTTTTCTGGACCAGTGGGAACTGGCAGGATGGTCGATTTGAGTTCTCGGAAGAACTTTCCAACATTAACAATCGAGAATTCGTGTTCAGTCGATTTTCAAATGAGAACGAGACATTTTTCAATTACTCCACCTCCAATCTCTTTCAATTGCCTAACCAGAACACGGGATTGATTGAAGTTCAAACCTTATTGAGATTGGGGAACGACGGGAAATTGGTGGGGCGTAATTCGAATTCAGAAGTTGAATGTCCCTATTTTGAAAATGAGTTGTTTGAGCCTAAGAATGTTTCTGAAGGTGGGTGTGTGGGGAAAACACAGCACAAAGTACCCGAGTGCCGAAATCCACCAAAACAGTTTTCCACTTCACAGAGATTTGGAAACATGGAAGGAAATGGTTCGAGGTTCAGAGAAAGTGAGAACCTGACCATTTATGATTGCGAAAAGAATTGCATTTCAAGCTGTGATTGCATTGCCTTTAGTTCTACAAACGAAGAAGGCACTGGCTGTGAGATGTGGAATGTGGGCGCAACGTTTATTCCAGTGGAGGGAGGCAAACGGATTATTTGGTCTCTTGAGGTGACTGAAGGGAAAGCTCCTGCAGGAGAAAAAAGGGTATGGTTGCAAGTTACAATCGGCCTAATAGTACCTGTAACTTCTCTCCTTTTGTGTTTTATTGTCTATCTCAAATGGAAAACACAAATACTCCAAGCTATTGGAAAAATGAGGAAGGATTCTGAACATCAAAATTTTCTACAAGAAATGGGGGCCAAATCTAAGAGTATTAACATTCTAACAATGAACAAGCAAAGAAGAGACTTAAAGAACTCCGAATTGCAGTTTTTCAGTTTTAGAAGTATAGTTTTTACAACAAACAATTTCGCTGACGATTGTAAGCTCGGACAAGGTGGGTTTGGACCAGTTTATAAGGGAAGTTTGGCCGATGGCCAAGAAGTTGCCATTAAAAGACTTTCAAAGAATTCTGGACAAGGGCTAGAGGAGTTCAAGAATGAAGTCATACTGATTGCCAAACTGCAACACACAAATCTGGTTAGGCTTATTGGTTGCTGCATTCATAAAGAAGAGAGGTTATTGGTGTATGAGTACATGCCCAACAAAAGCCTTGACTCCTTCCTCTTTGATCCAGTTAGAAAGCTAATTCTAGATTGGGACAAACGCCTACACATAATCCAAGGGATAGTTCAAGGACTACTCTACCTTCATAACTACTCGAGATTACGAATAGTTCATCGAGATTTAAAAGTCAGCAACATCTTGCTTGATGATGAGATGAATGCAAAAATATCAGATTTTGGCATGGCCAAAATCTTTAATCTCACAGAGGAAGAAGCAAATACTAATCACATTGTTGGTACATTGGGTTATATAGCACCTGAAAATGCAATGGGGGGCATTTCCTCCCTAAAATCAGATGTTTACAGCTTTGGAGTGTTATTATTGGAGATCATAACAGCTCAAAAAAACTACAACAATTATGATGTGGAACGACCTATGAATCTCATTGGATATGCATGGGAAGTGTGGGTGAATGGTAGAGGAGAAGAACTAATTGATCCAACTTTGTGCAACTCTGATCAGAAACCAAAGGCTCTAAGATGCATCCATGTTAGTCTTCTATGCGTCCAACAAATACCAACAGATAGACCTACCATGCTTGATGTTTATTTCATGATTCAGAATGATTCTACTCAACTTCCATTGCCAAAACAACCTCCGTTTTTCATCACCCAGAACTCCAAACTGGAAGTGGTGACAGATGACATTGAACTCAAATCAGAATCAACAACAGAAATATGTTCTTCAAATAGTATGTCAGTTTCCATGATGGTTGCGAGATGA 2634 40.36 MTIAQLTNNFKANSFPRNNYPNCKPKRVDLWSFHQFHNRRSRCNLGMATSNEIMFNCFVLVLLLPFSNAQSDVLAQGQKLTPESTLISATETFSLGFYSPSLLNNSYIAIWYTRDSQNPVWIANRNFAFPRDFGTPCLTIDSNGSLKIVPKEGKGRNGYNFYLFEVEEPTNSSAILLDSGNFVLGVLNPDGSIKRQLWQSFDHPTDTLLPGMKLGINHKTGATWSITSRRGDYSVLSGSFTLIMNPNNTNQLLILLRGAVFWTSGNWQDGRFEFSEELSNINNREFVFSRFSNENETFFNYSTSNLFQLPNQNTGLIEVQTLLRLGNDGKLVGRNSNSEVECPYFENELFEPKNVSEGGCVGKTQHKVPECRNPPKQFSTSQRFGNMEGNGSRFRESENLTIYDCEKNCISSCDCIAFSSTNEEGTGCEMWNVGATFIPVEGGKRIIWSLEVTEGKAPAGEKRVWLQVTIGLIVPVTSLLLCFIVYLKWKTQILQAIGKMRKDSEHQNFLQEMGAKSKSINILTMNKQRRDLKNSELQFFSFRSIVFTTNNFADDCKLGQGGFGPVYKGSLADGQEVAIKRLSKNSGQGLEEFKNEVILIAKLQHTNLVRLIGCCIHKEERLLVYEYMPNKSLDSFLFDPVRKLILDWDKRLHIIQGIVQGLLYLHNYSRLRIVHRDLKVSNILLDDEMNAKISDFGMAKIFNLTEEEANTNHIVGTLGYIAPENAMGGISSLKSDVYSFGVLLLEIITAQKNYNNYDVERPMNLIGYAWEVWVNGRGEELIDPTLCNSDQKPKALRCIHVSLLCVQQIPTDRPTMLDVYFMIQNDSTQLPLPKQPPFFITQNSKLEVVTDDIELKSESTTEICSSNSMSVSMMVAR 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3168723 3172175 - CaPI482276_09g002540.1 Cam09g0254 134583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0254 877 Pfam Protein tyrosine and serine/threonine kinase 556 765 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0254 877 SUPERFAMILY Protein kinase-like (PK-like) 536 854 IPR011009 -
Cam09g0254 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam09g0254 877 CDD B_lectin 80 204 IPR001480 -
Cam09g0254 877 Pfam D-mannose binding lectin 120 230 IPR001480 -
Cam09g0254 877 Pfam PAN-like domain 398 432 IPR003609 -
Cam09g0254 877 ProSiteProfiles Bulb-type lectin domain profile. 71 197 IPR001480 -
Cam09g0254 877 ProSiteProfiles PAN/Apple domain profile. 371 452 IPR003609 -
Cam09g0254 877 SMART blect_4 71 204 IPR001480 -
Cam09g0254 877 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 191 839 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cam09g0254 877 Gene3D Transferase(Phosphotransferase) domain 1 628 831 - -
Cam09g0254 877 PIRSF SRK 46 877 IPR024171 GO:0004674(InterPro)
Cam09g0254 877 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 628 831 - -
Cam09g0254 877 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 517 627 - -
Cam09g0254 877 Gene3D - 65 202 IPR036426 -
Cam09g0254 877 SUPERFAMILY alpha-D-mannose-specific plant lectins 109 268 IPR036426 -
Cam09g0254 877 Gene3D Phosphorylase Kinase; domain 1 525 627 - -
Cam09g0254 877 SMART serkin_6 552 821 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam09g0254 877 CDD STKc_IRAK 558 825 - -
Cam09g0254 877 ProSiteProfiles Protein kinase domain profile. 552 839 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0210 Cam-Chr9:2751518 Cam09g0254 Cam-Chr9:3168723 2.20E-270 dispersed
Cam09g0254 Cam-Chr9:3168723 Cam10g0584 Cam-Chr10:8981569 2.30E-118 dispersed
Cam09g0254 Cam-Chr9:3168723 Cam01g2300 Cam-Chr1:35192918 2.80E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85416 PF00069 Pkinase 2.20E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0254 - - - 0.0