Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0265 ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAGCGGTGAGAAAGGACAGCTAACACAGTTCAATAGCGACCTATTTGAACAGGTTATTTCAGAATGCCAGCAGCATCATCTTGAGCTTCAGTCCTTAATTAGGAAAGTACAGGAAGAAGGATTCGATCTTCAGACAACTAAGAATGAAGATCATTTTGGTGCGCTCATTCACCACCTTGCATTAGTTCGCAATAAACGCTGCCTTATGGCTTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGTAGGATCTATGATTCCACCGGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTCAAGAAGCATTCTGCACGTCTGAAAGAATATATGTCAAAACTGGAGTTGGATTTGACAGTGGACATGGTGCCACCTAAGGATCCTTATATCCAAGTGAGGGTGCTTGATGATATCGGTGAAGGAATCGTATTGAGTGATGATAAAACAGCAAATTTTGCGCTTCATTCCATACATTTTCTTAAACGAACAGACGCTGAACAATACATCTCACGGTTGTTAGCAAGCGATGTGTTTCCTGCATCTGTTGTGAAAGCAATTCTATATCCTGGAGCCATTGCAAAAGCCATCTTTAACAACAAACCTATTCCATCCTTTAATAGCTTGCCAAAGCTATACAAGTTTATCCATGTTAAACCAACAGCTTTTCCTCTCACCTCGGATCTCCATCGCCTAGAGGTTATTGCAGGAAGTTATTTGGCAGTAGGAGGAGGTGTCATGGGAATGGTTAAAGCGGGGAGTGGGAGAATGAGTCTATTTGGTTGCCTTATCGCAATGTGGGGAATTGTTTGGAGGAAATCTTCAAATTTAAATCCCAATAAGGAAATTGGCCAAATCTATCCGACCATGTTTCTTGCTCTGCTTTTGGCTTTCTTGTCTGTTAGGAAGGATGTGAGGAGAATAGTACGTACCCTCAAACCTCAATCCAACCCTTTTTCTTCATGGAACAAACACAAGCACAAATGA 1047 41.17 MYGRKACQLVKELASGEKGQLTQFNSDLFEQVISECQQHHLELQSLIRKVQEEGFDLQTTKNEDHFGALIHHLALVRNKRCLMAYVYNRAEIIRSLIWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHFLKRTDAEQYISRLLASDVFPASVVKAILYPGAIAKAIFNNKPIPSFNSLPKLYKFIHVKPTAFPLTSDLHRLEVIAGSYLAVGGGVMGMVKAGSGRMSLFGCLIAMWGIVWRKSSNLNPNKEIGQIYPTMFLALLLAFLSVRKDVRRIVRTLKPQSNPFSSWNKHKHK 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3230701 3236237 - CaPI482276_09g002650.1 Cam09g0265 134594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0265 348 CDD GINS_B_Psf1 149 190 - -
Cam09g0265 348 Pfam GINS complex protein helical bundle domain 63 135 IPR021151 -
Cam09g0265 348 SUPERFAMILY GINS helical bundle-like 1 147 IPR036224 -
Cam09g0265 348 Gene3D - 1 135 - -
Cam09g0265 348 CDD GINS_A_psf1 3 137 IPR005339 GO:0000811(InterPro)|GO:0006260(InterPro)
Cam09g0265 348 PANTHER PARTNER OF SLD5 1 192 IPR005339 GO:0000811(InterPro)|GO:0000811(PANTHER)|GO:0006260(InterPro)|GO:1902983(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam08g1783 Cam-Chr8:24039790 Cam09g0265 Cam-Chr9:3230701 1.50E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0265 K10732 - csv:101205409 378.637