Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0271 ATGCTTCAAAAGAAGGGTTGCCTCCCACTACTCAATCGAATCATTGGGGTTTCAGGCTGCTTAAACTTAGAGGGTTTTCAGATGACATATTTTCCTGGTTTAAGTAATCAAAGAGACTCCATGTTAGGTGATCAGAAACTTGGTTCTTCTTGCCAAGAACAGCCTCTTTGTTCTGGGAATTTGATGATGTTCATGAATCAAGACCCTTCTTGCAGAGATTATTCAGAGATTTTTTCTGGGGTTTCTTCAAACTATGTTGAAACTGTGGGAGATAGAAGTAATGTTGAAATGGCTTTCATTCCACCAGTTGTGGGAATTTTAGATGACTCAAATTTCCAATGTCAAGGTGTTTCACTTAGCCTTTCCACACACTCACCCTCTGTTGTTTCCATGCCTTCATTTCCTCACCAATATCAGACCCCTGCTATGCCTTCTTCATTCATCAATAATGCACCTCCTTTGATCTTCGAGAAGAGGCCGAATCTGAAACCTTCTATAAATGATGCGAAAAATGGCATGTATATAGCGGTGGGTTCTGGATATTCGACATTGAATTCGGTATACATCGAAGCTGCACAGCAGTTGCTCGACGAAATGGTTAGCATCCGCGAAGCTTTGAAAGAGTTGAAGTCTAAGAAACTCAAAGCTTCCAATGGTTTGGGTGTTGATTCCTGCAGAGAAAATGATGGTGGATCTAATGATTTGACTGGGGAGATGTGTGGCAATGTGAGGCAGTCGCCGATTAATCCGTCAGGGGATCTATCGCCTACCGAACGTCAGGACTTGAAGAACAAAAACTCAAAGCTTTTGTCCTTGTTGGGCGAGGTGGATCGAAGATACAGGCAATATTACCAACAGCTGCAATATTTGGCGTCGTCTTTTGACATGGTAGCAGGCCGAGGGGCTGCAGATTTCTACACTGCACTCGCACACCAAACTATTTCGTGCCACTTTCGCCGCTTGCGAGATGCAATCAATGCACAGATTGAGGTCACCAGGAGAACCTTGGGGGAGCAAGATGCTTTACATTCTGGTCAAGAGGGCATTCCTCGTCTCCGCTTTGTCGACCAACACCTCAGGCAACAGAGAGCTCTTCAGCAGCTTGGTGTCACGCCACATAGTTGGAGGCCTCAACGAGGGCTTCCCGAAAGTTCCGTGTCAATTCTTCGCGCTTGGCTGTTCGAACACTTCCTCCATCCATATCCCAAGGACTCCGAGAAACTTAAGCTAGCTAGACAAACTGGCCTGACGAGAAACCAAGTCGCAAACTGGTTTATAAATGCACGTGTTCGGCTATGGAAACCAATGGTAGAGGAGATGTACAAAGAAGAATTTGGAGACTCCAACATTGACATCAAATCCTCACCAGAAAATGCATCCAAAGTATCATGGAACAATTCACTATTCTCCGAAGATAAGGGAGGAGACGAGATGCACGACAGCACGAAATCTGCAGCAAACAACGGCGAGCGAGTCCTCTACCGCCCGTGTGCTACCGACGACATGATCAACTCGAGTAACTTCTCAATGGGAGGAGGAGGAGATGTTTCACTTGCACTGGAGTTGAAGCATTGTGAAGGTGATGAATTTGGGATGTTTGGGAATAACAATAGAATGGTTGGTTCTGTGGAGCTTGAGGCACAAGATTTTCCATGTTTGGAACCAGAAAGACATCATCAATGCAGGCTCACAAGTTCAAATATGTTGCATGATTTTATTGGCCTGGATCTGTGTCGGTCTCATTCTTCCAGAACAACCACTAAGCTAAATTCAACTAACTTGCCTCCACATGCAGTGGCGGATTTTCACTCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCATCACTGTTTTCACTTCACTGCAATTTCGTCGCGAAGTGGGGGAGGTTTGAGCTTGTGCGCGTTGAAACATCGATCTCCTGTAATACGCATCATGAAACGCCCCTTTCTATCTGTTACAATGGCGAAGAAGAGATGGCCGTTGATGATCTTAGCATTGGTTTCAATTTCCACGGCAATGGTTTTCTTCATGAGGACTACGTTCGATTCTTGTAGTGGTAATGGAAATAGACGTTTTGTGGAAGAAAATGGTATCGACTCACAGATTCGTTCCTCCCAAATCGAGAGAAAAGCTCCGAATCCTCTTGATTTCATGAAGTCCAAGCTCGTCCTCTTGGTCTCACATGAGCTCTCTCTTTCTGGTGGGCCTCTACTACTCATGGAGCTTGCATTTTTGTTGAGAGGCGTCGGTACTCAAGTTGTTTGGATTACCAATCAAAAGCCATCGGAGCCTGATGAAGTAGTGTACAGTTTGGAGCGCAAGATGTTAGATCGAGGAGTGCAGGTTTTATCTGCTAAGGGACAAGAAGCTGTGGAAACCGCTCTAAAAGCTCATTTGGTTGTTCTAAATACCGCTGTTGCTGGGAAATGGTTGGATGCTGTCCTTAAGGAAAATGTTCCCCGTGTCCTTCCCAAGGTTCTGTGGTGGATTCATGAGATGCGAGGGAATTATTTCAAAGTTGAGTATGTGAAGCACCTCCCTTTTGTTGCAGGTGCTATGATTGATTCACATACAACTGCAGAATACTGGAAAAACAGAACACGGGAACGTTTAGGGATTCAAATGCCTGAAACTTATGTCGTGCATCTTGGAAATAGTAAGGACCTTATGGAAGTGGCTGAAAATAATGTGGCCAAGAGGGTTCTTCGAGAGCATATTCGTGAGTCCCTTGGAGTTCGGAATGAAGATATATTGTTTGCAATTATAAATAGTGTTTCGCGTGGGAAAGGTCAGGATTTATTTCTCCGGGCCTTTCATCAGAGCCTGCAAATGATCCAAGATAAAAAGCTGCGGGTACCAAGGATACATGCAGTGGTAGTTGGCAGTGACATGAGTGCTCAAACAAAGTTTGAAACAGAACTGCGCAACTTTGTGAATGAGAATAAAATTCAGGATCGTGTTCATTTTGTCAACAAAACCCTGTCTGTGGCTCCGTATCTCGCTTCTATTGATGTTCTTGTTCAAAACTCTCAGGGTAGGGGAGAATGCTTTGGAAGGATAACCATTGAAGCCATGGCGTTTCAACTACCTGTGCTGGGCACGGCTGCTGGAGGAACAATGGAGATCGTAGTGAACGGGACAACGGGTTTGCTGCATCCTGCAGGGAAAGAAGGTGTAACTCCACTGGCACATAACATTGTGAAGTTAGCGACACACGTCGAGCGAAGGCTGACCATCGGAAAGAAAGGATATGAGAGGGTGAGGCAAATGTTCCTGGAACAACACATGGGGCAAAGAATTGCTGTTGTTTTGAAGAAAGTTCTGGAGAAAGCAAAGAGCCACTCTAGTCATTAG 3369 44.88 MLQKKGCLPLLNRIIGVSGCLNLEGFQMTYFPGLSNQRDSMLGDQKLGSSCQEQPLCSGNLMMFMNQDPSCRDYSEIFSGVSSNYVETVGDRSNVEMAFIPPVVGILDDSNFQCQGVSLSLSTHSPSVVSMPSFPHQYQTPAMPSSFINNAPPLIFEKRPNLKPSINDAKNGMYIAVGSGYSTLNSVYIEAAQQLLDEMVSIREALKELKSKKLKASNGLGVDSCRENDGGSNDLTGEMCGNVRQSPINPSGDLSPTERQDLKNKNSKLLSLLGEVDRRYRQYYQQLQYLASSFDMVAGRGAADFYTALAHQTISCHFRRLRDAINAQIEVTRRTLGEQDALHSGQEGIPRLRFVDQHLRQQRALQQLGVTPHSWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKLKLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSNIDIKSSPENASKVSWNNSLFSEDKGGDEMHDSTKSAANNGERVLYRPCATDDMINSSNFSMGGGGDVSLALELKHCEGDEFGMFGNNNRMVGSVELEAQDFPCLEPERHHQCRLTSSNMLHDFIGLDLCRSHSSRTTTKLNSTNLPPHAVADFHSLLLLLLLLLLLLPPHHCFHFTAISSRSGGGLSLCALKHRSPVIRIMKRPFLSVTMAKKRWPLMILALVSISTAMVFFMRTTFDSCSGNGNRRFVEENGIDSQIRSSQIERKAPNPLDFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTQVVWITNQKPSEPDEVVYSLERKMLDRGVQVLSAKGQEAVETALKAHLVVLNTAVAGKWLDAVLKENVPRVLPKVLWWIHEMRGNYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIQMPETYVVHLGNSKDLMEVAENNVAKRVLREHIRESLGVRNEDILFAIINSVSRGKGQDLFLRAFHQSLQMIQDKKLRVPRIHAVVVGSDMSAQTKFETELRNFVNENKIQDRVHFVNKTLSVAPYLASIDVLVQNSQGRGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPAGKEGVTPLAHNIVKLATHVERRLTIGKKGYERVRQMFLEQHMGQRIAVVLKKVLEKAKSHSSH 1122
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3279251 3287879 + CaPI482276_09g002710.1 Cam09g0271 134600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0271 1122 Pfam Glycosyl transferases group 1 909 1090 IPR001296 GO:0016757(InterPro)
Cam09g0271 1122 Pfam Glycosyl-transferase family 4 724 903 IPR041693 -
Cam09g0271 1122 MobiDBLite consensus disorder prediction 220 261 - -
Cam09g0271 1122 Pfam Homeobox KN domain 392 431 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Cam09g0271 1122 Gene3D Glycogen Phosphorylase B; 896 1096 - -
Cam09g0271 1122 CDD GT4_PimA-like 755 1106 - -
Cam09g0271 1122 PANTHER GLYCOSYLTRANSFERASE 656 1119 - -
Cam09g0271 1122 FunFam UDP-Glycosyltransferase superfamily protein 898 1096 - -
Cam09g0271 1122 Pfam Associated with HOX 184 325 IPR006563 -
Cam09g0271 1122 SMART prehox3 177 327 IPR006563 -
Cam09g0271 1122 CDD homeodomain 375 436 IPR001356 GO:0003677(InterPro)
Cam09g0271 1122 MobiDBLite consensus disorder prediction 238 257 - -
Cam09g0271 1122 Gene3D - 372 449 - -
Cam09g0271 1122 Coils Coil 189 212 - -
Cam09g0271 1122 ProSiteProfiles 'Homeobox' domain profile. 372 435 IPR001356 GO:0003677(InterPro)
Cam09g0271 1122 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 723 1114 - -
Cam09g0271 1122 SMART HOX_1 375 439 IPR001356 GO:0003677(InterPro)
Cam09g0271 1122 SUPERFAMILY Homeodomain-like 376 442 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1268 Cam-Chr7:27039695 Cam09g0271 Cam-Chr9:3279251 2.00E-38 dispersed
Cam09g0271 Cam-Chr9:3279251 Cam11g0432 Cam-Chr11:5734054 2.80E-92 dispersed
Cam09g0271 Cam-Chr9:3279251 Cam10g1793 Cam-Chr10:32060581 6.10E-71 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52528 PF00534 Glycos_transf_1 2.40E-20 CL0113 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0271 - - - 0.0