Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam09g0271 | ATGCTTCAAAAGAAGGGTTGCCTCCCACTACTCAATCGAATCATTGGGGTTTCAGGCTGCTTAAACTTAGAGGGTTTTCAGATGACATATTTTCCTGGTTTAAGTAATCAAAGAGACTCCATGTTAGGTGATCAGAAACTTGGTTCTTCTTGCCAAGAACAGCCTCTTTGTTCTGGGAATTTGATGATGTTCATGAATCAAGACCCTTCTTGCAGAGATTATTCAGAGATTTTTTCTGGGGTTTCTTCAAACTATGTTGAAACTGTGGGAGATAGAAGTAATGTTGAAATGGCTTTCATTCCACCAGTTGTGGGAATTTTAGATGACTCAAATTTCCAATGTCAAGGTGTTTCACTTAGCCTTTCCACACACTCACCCTCTGTTGTTTCCATGCCTTCATTTCCTCACCAATATCAGACCCCTGCTATGCCTTCTTCATTCATCAATAATGCACCTCCTTTGATCTTCGAGAAGAGGCCGAATCTGAAACCTTCTATAAATGATGCGAAAAATGGCATGTATATAGCGGTGGGTTCTGGATATTCGACATTGAATTCGGTATACATCGAAGCTGCACAGCAGTTGCTCGACGAAATGGTTAGCATCCGCGAAGCTTTGAAAGAGTTGAAGTCTAAGAAACTCAAAGCTTCCAATGGTTTGGGTGTTGATTCCTGCAGAGAAAATGATGGTGGATCTAATGATTTGACTGGGGAGATGTGTGGCAATGTGAGGCAGTCGCCGATTAATCCGTCAGGGGATCTATCGCCTACCGAACGTCAGGACTTGAAGAACAAAAACTCAAAGCTTTTGTCCTTGTTGGGCGAGGTGGATCGAAGATACAGGCAATATTACCAACAGCTGCAATATTTGGCGTCGTCTTTTGACATGGTAGCAGGCCGAGGGGCTGCAGATTTCTACACTGCACTCGCACACCAAACTATTTCGTGCCACTTTCGCCGCTTGCGAGATGCAATCAATGCACAGATTGAGGTCACCAGGAGAACCTTGGGGGAGCAAGATGCTTTACATTCTGGTCAAGAGGGCATTCCTCGTCTCCGCTTTGTCGACCAACACCTCAGGCAACAGAGAGCTCTTCAGCAGCTTGGTGTCACGCCACATAGTTGGAGGCCTCAACGAGGGCTTCCCGAAAGTTCCGTGTCAATTCTTCGCGCTTGGCTGTTCGAACACTTCCTCCATCCATATCCCAAGGACTCCGAGAAACTTAAGCTAGCTAGACAAACTGGCCTGACGAGAAACCAAGTCGCAAACTGGTTTATAAATGCACGTGTTCGGCTATGGAAACCAATGGTAGAGGAGATGTACAAAGAAGAATTTGGAGACTCCAACATTGACATCAAATCCTCACCAGAAAATGCATCCAAAGTATCATGGAACAATTCACTATTCTCCGAAGATAAGGGAGGAGACGAGATGCACGACAGCACGAAATCTGCAGCAAACAACGGCGAGCGAGTCCTCTACCGCCCGTGTGCTACCGACGACATGATCAACTCGAGTAACTTCTCAATGGGAGGAGGAGGAGATGTTTCACTTGCACTGGAGTTGAAGCATTGTGAAGGTGATGAATTTGGGATGTTTGGGAATAACAATAGAATGGTTGGTTCTGTGGAGCTTGAGGCACAAGATTTTCCATGTTTGGAACCAGAAAGACATCATCAATGCAGGCTCACAAGTTCAAATATGTTGCATGATTTTATTGGCCTGGATCTGTGTCGGTCTCATTCTTCCAGAACAACCACTAAGCTAAATTCAACTAACTTGCCTCCACATGCAGTGGCGGATTTTCACTCACTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCATCACTGTTTTCACTTCACTGCAATTTCGTCGCGAAGTGGGGGAGGTTTGAGCTTGTGCGCGTTGAAACATCGATCTCCTGTAATACGCATCATGAAACGCCCCTTTCTATCTGTTACAATGGCGAAGAAGAGATGGCCGTTGATGATCTTAGCATTGGTTTCAATTTCCACGGCAATGGTTTTCTTCATGAGGACTACGTTCGATTCTTGTAGTGGTAATGGAAATAGACGTTTTGTGGAAGAAAATGGTATCGACTCACAGATTCGTTCCTCCCAAATCGAGAGAAAAGCTCCGAATCCTCTTGATTTCATGAAGTCCAAGCTCGTCCTCTTGGTCTCACATGAGCTCTCTCTTTCTGGTGGGCCTCTACTACTCATGGAGCTTGCATTTTTGTTGAGAGGCGTCGGTACTCAAGTTGTTTGGATTACCAATCAAAAGCCATCGGAGCCTGATGAAGTAGTGTACAGTTTGGAGCGCAAGATGTTAGATCGAGGAGTGCAGGTTTTATCTGCTAAGGGACAAGAAGCTGTGGAAACCGCTCTAAAAGCTCATTTGGTTGTTCTAAATACCGCTGTTGCTGGGAAATGGTTGGATGCTGTCCTTAAGGAAAATGTTCCCCGTGTCCTTCCCAAGGTTCTGTGGTGGATTCATGAGATGCGAGGGAATTATTTCAAAGTTGAGTATGTGAAGCACCTCCCTTTTGTTGCAGGTGCTATGATTGATTCACATACAACTGCAGAATACTGGAAAAACAGAACACGGGAACGTTTAGGGATTCAAATGCCTGAAACTTATGTCGTGCATCTTGGAAATAGTAAGGACCTTATGGAAGTGGCTGAAAATAATGTGGCCAAGAGGGTTCTTCGAGAGCATATTCGTGAGTCCCTTGGAGTTCGGAATGAAGATATATTGTTTGCAATTATAAATAGTGTTTCGCGTGGGAAAGGTCAGGATTTATTTCTCCGGGCCTTTCATCAGAGCCTGCAAATGATCCAAGATAAAAAGCTGCGGGTACCAAGGATACATGCAGTGGTAGTTGGCAGTGACATGAGTGCTCAAACAAAGTTTGAAACAGAACTGCGCAACTTTGTGAATGAGAATAAAATTCAGGATCGTGTTCATTTTGTCAACAAAACCCTGTCTGTGGCTCCGTATCTCGCTTCTATTGATGTTCTTGTTCAAAACTCTCAGGGTAGGGGAGAATGCTTTGGAAGGATAACCATTGAAGCCATGGCGTTTCAACTACCTGTGCTGGGCACGGCTGCTGGAGGAACAATGGAGATCGTAGTGAACGGGACAACGGGTTTGCTGCATCCTGCAGGGAAAGAAGGTGTAACTCCACTGGCACATAACATTGTGAAGTTAGCGACACACGTCGAGCGAAGGCTGACCATCGGAAAGAAAGGATATGAGAGGGTGAGGCAAATGTTCCTGGAACAACACATGGGGCAAAGAATTGCTGTTGTTTTGAAGAAAGTTCTGGAGAAAGCAAAGAGCCACTCTAGTCATTAG | 3369 | 44.88 | MLQKKGCLPLLNRIIGVSGCLNLEGFQMTYFPGLSNQRDSMLGDQKLGSSCQEQPLCSGNLMMFMNQDPSCRDYSEIFSGVSSNYVETVGDRSNVEMAFIPPVVGILDDSNFQCQGVSLSLSTHSPSVVSMPSFPHQYQTPAMPSSFINNAPPLIFEKRPNLKPSINDAKNGMYIAVGSGYSTLNSVYIEAAQQLLDEMVSIREALKELKSKKLKASNGLGVDSCRENDGGSNDLTGEMCGNVRQSPINPSGDLSPTERQDLKNKNSKLLSLLGEVDRRYRQYYQQLQYLASSFDMVAGRGAADFYTALAHQTISCHFRRLRDAINAQIEVTRRTLGEQDALHSGQEGIPRLRFVDQHLRQQRALQQLGVTPHSWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKLKLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSNIDIKSSPENASKVSWNNSLFSEDKGGDEMHDSTKSAANNGERVLYRPCATDDMINSSNFSMGGGGDVSLALELKHCEGDEFGMFGNNNRMVGSVELEAQDFPCLEPERHHQCRLTSSNMLHDFIGLDLCRSHSSRTTTKLNSTNLPPHAVADFHSLLLLLLLLLLLLPPHHCFHFTAISSRSGGGLSLCALKHRSPVIRIMKRPFLSVTMAKKRWPLMILALVSISTAMVFFMRTTFDSCSGNGNRRFVEENGIDSQIRSSQIERKAPNPLDFMKSKLVLLVSHELSLSGGPLLLMELAFLLRGVGTQVVWITNQKPSEPDEVVYSLERKMLDRGVQVLSAKGQEAVETALKAHLVVLNTAVAGKWLDAVLKENVPRVLPKVLWWIHEMRGNYFKVEYVKHLPFVAGAMIDSHTTAEYWKNRTRERLGIQMPETYVVHLGNSKDLMEVAENNVAKRVLREHIRESLGVRNEDILFAIINSVSRGKGQDLFLRAFHQSLQMIQDKKLRVPRIHAVVVGSDMSAQTKFETELRNFVNENKIQDRVHFVNKTLSVAPYLASIDVLVQNSQGRGECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPAGKEGVTPLAHNIVKLATHVERRLTIGKKGYERVRQMFLEQHMGQRIAVVLKKVLEKAKSHSSH | 1122 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3279251 | 3287879 | + | CaPI482276_09g002710.1 | Cam09g0271 | 134600 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam09g0271 | 1122 | Pfam | Glycosyl transferases group 1 | 909 | 1090 | IPR001296 | GO:0016757(InterPro) | |
Cam09g0271 | 1122 | Pfam | Glycosyl-transferase family 4 | 724 | 903 | IPR041693 | - | |
Cam09g0271 | 1122 | MobiDBLite | consensus disorder prediction | 220 | 261 | - | - | |
Cam09g0271 | 1122 | Pfam | Homeobox KN domain | 392 | 431 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Cam09g0271 | 1122 | Gene3D | Glycogen Phosphorylase B; | 896 | 1096 | - | - | |
Cam09g0271 | 1122 | CDD | GT4_PimA-like | 755 | 1106 | - | - | |
Cam09g0271 | 1122 | PANTHER | GLYCOSYLTRANSFERASE | 656 | 1119 | - | - | |
Cam09g0271 | 1122 | FunFam | UDP-Glycosyltransferase superfamily protein | 898 | 1096 | - | - | |
Cam09g0271 | 1122 | Pfam | Associated with HOX | 184 | 325 | IPR006563 | - | |
Cam09g0271 | 1122 | SMART | prehox3 | 177 | 327 | IPR006563 | - | |
Cam09g0271 | 1122 | CDD | homeodomain | 375 | 436 | IPR001356 | GO:0003677(InterPro) | |
Cam09g0271 | 1122 | MobiDBLite | consensus disorder prediction | 238 | 257 | - | - | |
Cam09g0271 | 1122 | Gene3D | - | 372 | 449 | - | - | |
Cam09g0271 | 1122 | Coils | Coil | 189 | 212 | - | - | |
Cam09g0271 | 1122 | ProSiteProfiles | 'Homeobox' domain profile. | 372 | 435 | IPR001356 | GO:0003677(InterPro) | |
Cam09g0271 | 1122 | SUPERFAMILY | UDP-Glycosyltransferase/glycogen phosphorylase | 723 | 1114 | - | - | |
Cam09g0271 | 1122 | SMART | HOX_1 | 375 | 439 | IPR001356 | GO:0003677(InterPro) | |
Cam09g0271 | 1122 | SUPERFAMILY | Homeodomain-like | 376 | 442 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam07g1268 | Cam-Chr7:27039695 | Cam09g0271 | Cam-Chr9:3279251 | 2.00E-38 | dispersed | |
Cam09g0271 | Cam-Chr9:3279251 | Cam11g0432 | Cam-Chr11:5734054 | 2.80E-92 | dispersed | |
Cam09g0271 | Cam-Chr9:3279251 | Cam10g1793 | Cam-Chr10:32060581 | 6.10E-71 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
52528 | PF00534 | Glycos_transf_1 | 2.40E-20 | CL0113 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam09g0271 | - | - | - | 0.0 |