Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0275 ATGGAAGGTGCTTCGCTTCACGGAACGCTTCACGCCACAATCTATGAAGTCGACAGGTTGCATACTGGTGGTGGATCCAATCTCTTCAGCATGTTGAAGCAAAACTTTGAGGAGGCTGTTGGAATTGGCAAAGGTGAAACCAAACTATATGCGACTATAGATTTAGAAAAGGCTAGGGTTGGGAGGACACGAATATTGGAAACTGAACCCTCTAATCCAAGATGGTATGAATCTTTTCACATTTACTGTGCCCATAAGGCATCAAATGTTATCTTCACCGTGAAGGATGATAATCCCATTGGTGCAACTTTGATTGGACGTGCATATGTACCTGTGGAAGACATCTTGGATGGGGAGGAAGTTGACAGATGGGTTCCAATCTTAGATGAAGAGAAAAATCCAATTGAAGGAGAATCAAAGATTCATGTAAAGCTTCAATACTTCAGTGTTACTAAAGATCACAACTGGGGTCGTGGTATAAGAAGTCGTAAATTTCCTGGAGTTCCCTATACATATTACTCACAGAGACAAGGTTGTAAGGTTTCTTTGTATCAAGATGCTCATATCCCCGATAATTTTATTCCTAAAATTCCTCTTGCTGGAGGAAAAAATTATGCTCCCGCCAGATGTTGGGAAGATATTTTTGATGCCATACAAAATGCCAAACACCTGATCTACATCACAGGATGGTCTGTTTATACAGAAATTGCCTTGGTTAGGGACTCAAGGAGGCCAAAGCCAGGCGGAGACACCATGCTTGGTGAACTTCTTAAGAAGAAAGCAAGTGAAGGGGTCAGAGTTCTTATGCTTGTCTGGGATGACAGAACATCAGTCGGTTTACTTAAAAAAGATGGTCTGATGGCTACTCATGATGAAGAAACTGAACGTTACTTCCAAGATACAGATGTGCACTGTGTCTTGTGTCCTCGTAATCCTGATGATGGTGGAAGCATTGTTCAAGATCTACAAATCTCTACCATGTTCACTCATCACCAGAAGATTGTTGTGGTGGATAGCCCAATGCCAAGTGGAGAGTCAGATAAGAGGAGAATTGTGAGTTTCGTTGGTGGCATTGATCTATGTGATGGTAGGTATGACACACCCTTTCACTCCCTTTTCAGGACATTGGATACTGCACATCATGACGATTTCCATCAACCAAATTTTGCTGGTGCATCAATAACAAAAGGTGGACCGAGGGAACCTTGGCACGACATCCATTCCCGGCTTGAAGGGCCCATTGCCTGGGATGTTTTGTTCAATTTTGAGCAAAGGTGGAGGAAACAAGGTGGGAAGGATGTACTTGTGCAGCTACGAGAGCTTGATGAAATAATTATTCCTCCATCTCCTGTTATGTACCCAGACGACCATGACACCTGGAATGTTCAGTTGTTTAGATCAATAGATGGTGGGGCAGCTTTTGGCTTTCCTGAGACCCCTGAAGATGCTGCTAGAGCTGGTCTTGTCAGTGGGAAAGATAACATTATTGATAGAAGCATTCAGGACGCTTACATTAATGCTATTCGGCGGGCTAAGAATTTTATTTATATTGAAAACCAATATTTCCTTGGAAGTTGTTTTGCATGGTCTCCTGATAATATCAAGCCTGAGGATATTGGTGCCTTGCACTGTATTCCAAGGGAGCTTTCCCTCAAGATCGTTAGTAAGATTTTAGCAGGAGAAAGGTTCACTGTCTATGTTGTTGTCCCAATGTGGCCAGAAGGTCTCCCAGAAAGTGGATCTGTTCAGGCAATATTAGATTGGCAGAGGAGGACATTTGAAATGATGTATAAAGACGTGATTCAGGCTCTTAGAGATCAAGGTAGCGAAGAAGACCCTCGCAACTACTTGACATTCTTCTGTCTTGGCAACCGGGAAGTCAAGAGGTCTGGAGAATATCAACCTGCAGAGGCACCAGAGGAGGATTCTGATTATTTGAGAGCCCAGCAGGCCAGGCGTTTCATGATTTATGTTCACACCAAGATGATGATTGTTGATGATGAGTACATAATTGTTGGATCGGCGAATATCAACCAGAGATCCATGGATGGTGCAAGGGACTCTGAGATAGCAATGGGCGCTTATCAGCCATATCATCTGTCAGCCCGGGAACCTGCACGTGGTCAAGTTCACGGATTCCGTATGGCTCTATGGTATGAACATCTTGGTATGCTTGATGAATCTTTCCTTCGTCCAGAAAGTGAAGAATGTGTTGCAAAGGTAAACAGAATTGCTGATAAGTATTGGGATCTGTATTCAAGTGAATCACTCGAGAGGGACTTGCCCGGTCACCTCCTCCGCTACCCAGTTGGCATATCCAGTGAAGGAGAAGTCACAGAACTTCCAGGATTCGAGTTCTTCCCCGACACCAAAGCTCGTATACTCGGGACGAAATCCGACTACCTCCCTCCTATCCTCACTACCTAG 2427 43.88 MEGASLHGTLHATIYEVDRLHTGGGSNLFSMLKQNFEEAVGIGKGETKLYATIDLEKARVGRTRILETEPSNPRWYESFHIYCAHKASNVIFTVKDDNPIGATLIGRAYVPVEDILDGEEVDRWVPILDEEKNPIEGESKIHVKLQYFSVTKDHNWGRGIRSRKFPGVPYTYYSQRQGCKVSLYQDAHIPDNFIPKIPLAGGKNYAPARCWEDIFDAIQNAKHLIYITGWSVYTEIALVRDSRRPKPGGDTMLGELLKKKASEGVRVLMLVWDDRTSVGLLKKDGLMATHDEETERYFQDTDVHCVLCPRNPDDGGSIVQDLQISTMFTHHQKIVVVDSPMPSGESDKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFAGASITKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDVLVQLRELDEIIIPPSPVMYPDDHDTWNVQLFRSIDGGAAFGFPETPEDAARAGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCFAWSPDNIKPEDIGALHCIPRELSLKIVSKILAGERFTVYVVVPMWPEGLPESGSVQAILDWQRRTFEMMYKDVIQALRDQGSEEDPRNYLTFFCLGNREVKRSGEYQPAEAPEEDSDYLRAQQARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLSAREPARGQVHGFRMALWYEHLGMLDESFLRPESEECVAKVNRIADKYWDLYSSESLERDLPGHLLRYPVGISSEGEVTELPGFEFFPDTKARILGTKSDYLPPILTT 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3303544 3307320 + CaPI482276_09g002750.1 Cam09g0275 134604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0275 808 FunFam Phospholipase D delta 201 444 - -
Cam09g0275 808 SUPERFAMILY Phospholipase D/nuclease 151 438 - -
Cam09g0275 808 Pfam C2 domain 44 126 IPR000008 -
Cam09g0275 808 CDD C2_plant_PLD 6 148 - -
Cam09g0275 808 SMART C2_3c 9 124 IPR000008 -
Cam09g0275 808 FunFam Phospholipase D 467 700 - -
Cam09g0275 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 326 364 IPR001736 GO:0003824(InterPro)
Cam09g0275 808 ProSiteProfiles C2 domain profile. 1 125 IPR000008 -
Cam09g0275 808 SUPERFAMILY Phospholipase D/nuclease 444 738 - -
Cam09g0275 808 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 149 IPR035892 -
Cam09g0275 808 CDD PLDc_pPLDalpha_2 492 701 - -
Cam09g0275 808 Gene3D Endonuclease Chain A 200 442 - -
Cam09g0275 808 Pfam Phospholipase D Active site motif 656 681 IPR001736 GO:0003824(InterPro)
Cam09g0275 808 Pfam Phospholipase D Active site motif 327 364 IPR001736 GO:0003824(InterPro)
Cam09g0275 808 PIRSF PLD_plant 1 808 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Cam09g0275 808 Gene3D C2 domain 7 157 IPR035892 -
Cam09g0275 808 SMART pld_4 654 681 IPR001736 GO:0003824(InterPro)
Cam09g0275 808 SMART pld_4 326 364 IPR001736 GO:0003824(InterPro)
Cam09g0275 808 PANTHER PHOSPHOLIPASE D 12 795 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cam09g0275 808 Pfam Phospholipase D C terminal 726 798 IPR024632 -
Cam09g0275 808 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824(InterPro)
Cam09g0275 808 Gene3D Endonuclease Chain A 480 698 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam07g1199 Cam-Chr7:26372029 Cam09g0275 Cam-Chr9:3303544 3.20E-172 dispersed
Cam08g1871 Cam-Chr8:24724885 Cam09g0275 Cam-Chr9:3303544 7.10E-197 dispersed
Cam09g0275 Cam-Chr9:3303544 Cam10g0340 Cam-Chr10:5529311 1.10E-199 dispersed
Cam07g1296 Cam-Chr7:27325050 Cam09g0275 Cam-Chr9:3303544 0.00E+00 wgd
Cam08g1794 Cam-Chr8:24109040 Cam09g0275 Cam-Chr9:3303544 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0275 K01115 - csv:101206113 1606.27