Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0326 ATGCCGGTTGACGGTTCTTCAATTGCCGCCTCCACCGTATGCGTCACCGGCGCCGGTGGCTTCATTGCCTCATGGATCGTCAAACTCCTCCTCCAGAAAGGCTATATTGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACCGCCATTTGAGAGAACTCGAAGGTGCGGCGGAGCGGCTCAGTTTGCATAAAGCGGATCTTCTCGATTTCGAAAGCCTCAGAGCGGCGATCGACGGCTGCGATGGCGTTTTCCACACTGCGTCGCCTGTGACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTTAACGGAACGAAGAACGTCATAAGCGCGGCGGCCGAAGCCAATGTCCGTCGCGTGGTGTTCACGTCCTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGACATCGTCGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGTAAGAACACAAAGAATTGGTATTGCTATGGAAAAGCTGTGGCGGAGCAAGCCGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGATTTGGTGGTGGTGAATCCAGTGCTGGTGCTAGGGCCATTGTTGCAATCCACCATTAATGCGAGCATAATTCATATACTGAAGTACTTGACTGGATCAGCTAAGACGTATGCCAATTCCGTTCAGGCATATGTACACGTGAAGGATGTGGCTCTAGCTCATATCCTTGTGTACGAGACTCCCTCCGCCGCCGGCCGGTACCTCTGCGCCGAGAGTGTGCTTCACAGAGGGGAGGTTGTTGAGATTCTGGCCAAATTGTTCCCGGAATATCCTGTTCCTACCAAGTGCTCAGATGAAGTGAACCCGAGGAAGAAGGCATACAACTTCTCCAACAAGAAGCTGAAGGACTTGGGATTGGAGTTCACTCCAGCAAAGCAGTGTTTATACGACACCGTTAAGAGCCTACAAGAGAAAGGTCATCTCCCAATTCCCACTTCTACTCAACCAGTTGACTCCATTCGAATTCAATCTTGA 1017 52.41 MPVDGSSIAASTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNRHLRELEGAAERLSLHKADLLDFESLRAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVISAAAEANVRRVVFTSSIGAVYMDPNRGPDDIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYETPSAAGRYLCAESVLHRGEVVEILAKLFPEYPVPTKCSDEVNPRKKAYNFSNKKLKDLGLEFTPAKQCLYDTVKSLQEKGHLPIPTSTQPVDSIRIQS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3619736 3626078 + CaPI482276_09g003260.1 Cam09g0326 134655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0326 338 CDD FR_SDR_e 13 300 - -
Cam09g0326 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 315 IPR050425 GO:0016616(PANTHER)
Cam09g0326 338 FunFam Cinnamoyl-CoA reductase 1 4 335 - -
Cam09g0326 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 317 IPR036291 -
Cam09g0326 338 Gene3D - 4 337 - -
Cam09g0326 338 Pfam NAD dependent epimerase/dehydratase family 13 245 IPR001509 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g2382 Cam-Chr2:36328889 Cam09g0326 Cam-Chr9:3619736 2.00E-86 dispersed
Cam02g2389 Cam-Chr2:36385786 Cam09g0326 Cam-Chr9:3619736 4.00E-79 dispersed
Cam09g0326 Cam-Chr9:3619736 Cam10g1378 Cam-Chr10:27358474 8.40E-149 dispersed
Cam02g1112 Cam-Chr2:20644247 Cam09g0326 Cam-Chr9:3619736 1.20E-62 transposed
Cam03g0032 Cam-Chr3:1288112 Cam09g0326 Cam-Chr9:3619736 6.70E-79 transposed
Cam05g2475 Cam-Chr5:32611422 Cam09g0326 Cam-Chr9:3619736 8.70E-63 transposed
Cam10g0714 Cam-Chr10:11731215 Cam09g0326 Cam-Chr9:3619736 4.70E-64 transposed
Cam11g1922 Cam-Chr11:31634104 Cam09g0326 Cam-Chr9:3619736 1.50E-75 transposed
Cam10g1377 Cam-Chr10:27343002 Cam09g0326 Cam-Chr9:3619736 3.80E-146 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0326 K09753 - csv:101213412 631.713