Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0333 ATGTTTGTCATCTCAAAGAGATTAGAACTCAAACAATTCAAGACTTGCACCACTTCACAATCCAATTCAACAATTGAGGACCCCAATTGTTCGAAGCGCTTGGCGGCTTGGAAAATGGGGATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCAGATGATGGTGAGAATGAAAGACTTCGGTATGGCCTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCATGCAGCCTATCTAGATTTGGACACTTCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTTCAAAGTTCTGTGCCAAGTATCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCTCTGCAGAAGGCCTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTAGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGGGTAGTGAAGCTAACAACCAAGTGGATGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCCTGTGTTGCAATCATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGTCAGGCATATAATCTATCCAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCCGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCTCGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACTGCCAATCCAGATGTGACAACTGTTGAGCTTTGTGAGGACGACGAGTTTCTTGTTATTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAACAACTGGTTGACTACATTGGAGATCAACTAAAATCGGAAAGTAAACTCTCAGTCATTTGTGAGAGAGTGTTCGACAGATGCTTGGCACCCACAGCTGGCGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAGTTTAAGAAACCCTTCAACAACCCAAATGCTGCTTCTACTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAAACGTTGTCTGGTCCGAATGAAGGCTCTTCGAAGACTTAA 1206 45.02 MFVISKRLELKQFKTCTTSQSNSTIEDPNCSKRLAAWKMGIYLSSPKTEKASDDGENERLRYGLSSMQGWRATMEDAHAAYLDLDTSTSFFGVYDGHGGKAVSKFCAKYLHRQVLKHESYMAGDLGTSLQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGFIWSPKGSEANNQVDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKSESKLSVICERVFDRCLAPTAGGEGCDNMTMILVQFKKPFNNPNAASTSAEELPSSSNQTLSGPNEGSSKT 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3673608 3682165 - CaPI482276_09g003330.1 Cam09g0333 134662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0333 401 Gene3D - 38 367 IPR036457 -
Cam09g0333 401 MobiDBLite consensus disorder prediction 374 401 - -
Cam09g0333 401 Pfam Protein phosphatase 2C 195 351 IPR001932 -
Cam09g0333 401 Pfam Protein phosphatase 2C 61 142 IPR001932 -
Cam09g0333 401 SMART PP2C_4 51 364 IPR001932 -
Cam09g0333 401 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169(InterPro)
Cam09g0333 401 CDD PP2Cc 61 366 IPR001932 -
Cam09g0333 401 ProSiteProfiles PPM-type phosphatase domain profile. 61 366 IPR001932 -
Cam09g0333 401 SUPERFAMILY PP2C-like 41 368 IPR036457 -
Cam09g0333 401 PANTHER PROTEIN PHOSPHATASE 2C 47 367 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cam09g0333 401 SMART PP2C_SIG_2 66 366 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam09g0333 Cam-Chr9:3673608 Cam09g0478 Cam-Chr9:4938292 3.10E-33 dispersed
Cam05g1785 Cam-Chr5:26650618 Cam09g0333 Cam-Chr9:3673608 9.90E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0333 K17499 - csv:101214132 710.679