Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0334 ATGATTATCACTGTGAAGGATTCGACTATGGTGACTCCGGCGGAGGAGACGCCGCATCGGAGCCTCTGGAATTCCAACGTCGATCTCGTGGTGCCGAGTATGCATACGCCGAGCGTCTACTTCTACCGCCCTACCGGCGCCTCTAATTTCTTCGACGCTCAGGTTCTCAAGGAAGGCCTAAGCAAGGCGCTGGTTCCGTTTTATCCAATGGCCGGACGGTTGAGACGCGATGAAGACGGTCGAATCGAGATCAACTGTAATGCCGAAGGTGTGCTTCTTGTCGAGGCTGAGACCACGGCGGTTATCGACGATTTTGGTGATTTCGCGCCTACGTTGCAGCTCCGGCAGCTTATTCCGGCAGTAGATTACTCCGGCGGAATCGAGTCGTACCCCTTGCTGGTGTTACAGGTGACACACTTCAAATGCGGTGGCGTTTCCCTCGGCGTCGGAATGCAGCACCATGTAGCGGACGGCTTCTCCGGTCTCCACTTCGTCAACACTTGGTCCGACATGTCGCGTGGCCTCGACCTCAAGCTCCGGCCTTACATCGACCGGACCCTCCTCCGTGCGCGGGACCCACCTCAACCGACCTTCCGACACATCGAATATCAACCGGCCCCACCCATGAAAATCCCGGTCCAGCCCGACCCGGACGGAACCACCGTCTCCATTTTCAAATTCACCCGGGAGCAGCTTAATTTACTCAAAGCCAAATCCAAAGAAAACGGCAACACCACCAACTACAGCTCCTACGAGATGCTCTCCGGCCACGTATGGCGGTGCACGTGCAAGGCTCGTGACCTTCCGGAGGATCAAGACACTAAGCTTTACATTGCCACCGACGGTCGTGCCCGGTTGCGCCCGCCGCTCCCCAACGGTTACTTTGGCAATGTCATCTTCACAACGACGCCGCTCGCCGTCGCCGGCGAACTAATGTCGAATCCGACGTGGTTCGCAGCCGGGAAGATCCACGACGCCTTGGCTCGGATGGATAACGATTACTTGAGGTCGGCTTTGGACTATCTCGAGATTCAGCCAAACATATCGGCGTTGGTCCGTGGTGCTCATACTTTCCGGTGCCCCAATTTGGGGATCACGAGCTGGGTCAGACTGCCGATTCACGACGCCGATTTCGGGTGGGGCCGGCCGATTTTTATGGGCCCCGGCGGAATCGCATACGAGGGATTGTCGTTTATAATCCCGAGTGCTTCCGACGACGGCAGCTTGTCGGTGGCGATTTCGCTGCAGAATCGACATATGAAGGTGTTTGAGAAGCTGTTCTTTGATATTTGA 1293 56.46 MIITVKDSTMVTPAEETPHRSLWNSNVDLVVPSMHTPSVYFYRPTGASNFFDAQVLKEGLSKALVPFYPMAGRLRRDEDGRIEINCNAEGVLLVEAETTAVIDDFGDFAPTLQLRQLIPAVDYSGGIESYPLLVLQVTHFKCGGVSLGVGMQHHVADGFSGLHFVNTWSDMSRGLDLKLRPYIDRTLLRARDPPQPTFRHIEYQPAPPMKIPVQPDPDGTTVSIFKFTREQLNLLKAKSKENGNTTNYSSYEMLSGHVWRCTCKARDLPEDQDTKLYIATDGRARLRPPLPNGYFGNVIFTTTPLAVAGELMSNPTWFAAGKIHDALARMDNDYLRSALDYLEIQPNISALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSASDDGSLSVAISLQNRHMKVFEKLFFDI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3696560 3700240 + CaPI482276_09g003340.1 Cam09g0334 134663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0334 430 Pfam Transferase family 2 425 - -
Cam09g0334 430 MobiDBLite consensus disorder prediction 196 215 - -
Cam09g0334 430 Gene3D - 211 430 IPR023213 -
Cam09g0334 430 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 421 IPR050317 GO:0016747(PANTHER)
Cam09g0334 430 FunFam Tryptamine hydroxycinnamoyl transferase 209 428 - -
Cam09g0334 430 Gene3D - 1 205 IPR023213 -
Cam09g0334 430 FunFam Spermidine hydroxycinnamoyl transferase 1 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0539 Cam-Chr4:18778954 Cam09g0334 Cam-Chr9:3696560 5.40E-10 dispersed
Cam05g2212 Cam-Chr5:30432775 Cam09g0334 Cam-Chr9:3696560 2.70E-06 dispersed
Cam09g0334 Cam-Chr9:3696560 Cam11g0900 Cam-Chr11:12942148 2.50E-44 dispersed
Cam09g0334 Cam-Chr9:3696560 Cam05g2049 Cam-Chr5:29173947 6.30E-40 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0334 K13065 - csv:101214857 847.81