Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam09g0353 ATGGCTGTTGAATCAAACCAAACTAACGAATTCATTTTCCGTTCAAAGCTTCCCCATATTCACATTCCCAATCATCTCCCACTCCACGAATACGTTTTCCAAAATCTCCCCAAATTTGCCTCACGCCCCTGTTTGATCAACGGCGCCACCGGCGATGTTTACTCCTACAGCGACCTTCACCTAACGGCCCGTCGAGTCGCCGCCGGCCTACACAGCCTCGGAATTAATAAGGGCGATGTCGTCATGAATTTGCTTCCCAACTCCCCGGAGTTCGTCTTCACCTTCCTCGCCGCGTCGTACCGGGGCGCCATCATGACGGCGGCGAACCCTTTTTACACGGCAGTGGAAATTGCAAAACAGGCCAAAGCCGCCAATGCGAAGTTGATCGTGACCATGGCTTGCTTCTACGATCGGGTTAAGGATTTGGCTGAAAATGGTGTCAAAATTGTATGCGTTGATTTCGCTGTCGAGGGTTGTTTGCATTTCTCTGTTTTGAGTGGGGCTGATGAATCTAATGCGCCGCCGGTTGATTTTTCCCCTGACGACGTGGTGGCGCTGCCGTACTCCTCCGGCACCACCGGTTTGCCGAAGGGAGTCATGTTAACTCACAAAGGGCTAATCACAAGCGTGGCTCAACAAATGGACGGCCAAAATCCGAACCTCTATTATCACGGCGATGATGTTATCCTCTGTGTGCTGCCGTTTTTCCACATTTATTCACTCAATTCCATTTTGCTGTGTGGGCTACGCGTCGGTGCTGCGATTGTGATTATGCAGAAATTTGACATCGTTTCTCTCTTGCAATTGATTGAGAAATACAGAATCTCGATCATGCCCATCGTCCCGCCGATCTTTTTGGCCATTGCTAAGTCGCCGGAATTTGAGAAATACGACGTGTCGTCAGTGAGGGTTCTCAAATCCGGTGGAGCTCCACTGGGGAAGGAGCTGGAAGACGCCGTGCGGGAGAAATTTCCGGCGGCGGTTCTCGGACAGGGGTATGGAATGACCGAGGCCGGTCCGGTTCTGAGTATGAGTTTAGCTTTTGCGAAAGAGCCGTTCGAAGTGAAAGCCGGAGCTTGTGGAACTGTGGTCCGAAATGCAGAGATGAAGATTGTCGACCCAGAAACCGGCGCGTCCTTGCCGGCGAATTCGGCCGGAGAGATTTGTATTAGAGGTGATCAGATCATGAAGGGGTATTTGAATGATTTGGAGTCAACAAAGAGGACTATTGATAAAGAAGGATGGCTTCACACCGGTGACATAGGGTTCGTGGACGACGACGATGAGATCTTCATTGTAGACCGGCTTAAGGAACTTATTAAATTTAAGGCCTTTCAAGTGGCGCCCGCCGAGCTGGAGGCCCTTCTTATCACCCACCCAAAACTATCTGACGCTGCTGTTATTGGTATGCCGGACGTGGAGGCCGGAGAAGTGCCGGTGGCGTTTGTGGTGAAGGCGAATGGCGGCGCAATATCAGAGGAAGAGGTAAAGCAATTCATAACAAAACAAGTGGTGTTCTACAAGAGGCTAAAACGTGTGTTTTTCGTCAAAGCAATTCCAAAAGCTCCATCTGGAAAAATCCTTAGAAAAGAACTCAGAGCCAAACTGGCTTCTGGTGCTTACAATTAA 1629 50.03 MAVESNQTNEFIFRSKLPHIHIPNHLPLHEYVFQNLPKFASRPCLINGATGDVYSYSDLHLTARRVAAGLHSLGINKGDVVMNLLPNSPEFVFTFLAASYRGAIMTAANPFYTAVEIAKQAKAANAKLIVTMACFYDRVKDLAENGVKIVCVDFAVEGCLHFSVLSGADESNAPPVDFSPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQMDGQNPNLYYHGDDVILCVLPFFHIYSLNSILLCGLRVGAAIVIMQKFDIVSLLQLIEKYRISIMPIVPPIFLAIAKSPEFEKYDVSSVRVLKSGGAPLGKELEDAVREKFPAAVLGQGYGMTEAGPVLSMSLAFAKEPFEVKAGACGTVVRNAEMKIVDPETGASLPANSAGEICIRGDQIMKGYLNDLESTKRTIDKEGWLHTGDIGFVDDDDEIFIVDRLKELIKFKAFQVAPAELEALLITHPKLSDAAVIGMPDVEAGEVPVAFVVKANGGAISEEEVKQFITKQVVFYKRLKRVFFVKAIPKAPSGKILRKELRAKLASGAYN 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3875424 3877167 + CaPI482276_09g003530.1 Cam09g0353 134682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam09g0353 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 533 - GO:0016405(PANTHER)
Cam09g0353 542 CDD 4CL 22 532 - -
Cam09g0353 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 437 - -
Cam09g0353 542 FunFam 4-coumarate--CoA ligase 2 438 539 - -
Cam09g0353 542 SUPERFAMILY Acetyl-CoA synthetase-like 15 538 - -
Cam09g0353 542 Pfam AMP-binding enzyme 37 400 IPR000873 -
Cam09g0353 542 Gene3D - 437 538 IPR045851 -
Cam09g0353 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Cam09g0353 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Cam09g0353 542 Gene3D - 3 436 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0781 Cam-Chr2:9702703 Cam09g0353 Cam-Chr9:3875424 3.00E-183 dispersed
Cam09g0353 Cam-Chr9:3875424 Cam09g0355 Cam-Chr9:3891845 3.90E-289 dispersed
Cam09g0353 Cam-Chr9:3875424 Cam09g0354 Cam-Chr9:3882537 1.8e-310 tandem
Cam10g1398 Cam-Chr10:27656377 Cam09g0353 Cam-Chr9:3875424 8.00E-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam09g0353 K01904 - csv:101218121 986.482